Difference between revisions of "Os03g0844900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0844900| Description = RNA binding S1 domain containing protein| Version = NM_001058410.1 GI:115456548 GeneID:4334761| Length = 3236 bp| D...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0844900|
 
GeneName = Os03g0844900|

Revision as of 19:46, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0844900

Description

RNA binding S1 domain containing protein

Version

NM_001058410.1 GI:115456548 GeneID:4334761

Length

3236 bp

Definition

Oryza sativa Japonica Group Os03g0844900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:36371394..36374629

Sequence Coding Region

36372334..36372540,36372630..36372711,36373168..36373288,36373368..36373527,36373882..36373943
,36374095..36374254,36374341..36374568

Expression

GEO Profiles:Os03g0844900

Genome Context

<gbrowseImage1> name=NC_008396:36371394..36374629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:36371394..36374629 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggcagcggcggcggcggctctccggccagcgcccaccaccgcggccttctccccctccaccgcgaggtccccgccaccaacgctcctctccttcgctcctccccgctctcaccagcgattccacctctccgccaccgccgagggcgcgggcaccaccgcggcgcaggaaggcgcgtcggcgtcggcgtcggctcccccggtcgacgaagcgcgactagcgcagttcgcggcggattggcaggcggcgcgcgcggagagggaccaggggaagatcctgaaactgcaggtgatacgggccaacagcggcgggttgatcgtcaggttcaactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaagaccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttggttcactcattcttctctagtcaagattggtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagacattggacaaagttattcctttggaggctgatcaatcacctagtgctgggatcatatcatctgattcatctccttcagaagctgatcttcttccaggacttgatggtatatgtaatgaactattgcaagaggatgggtatgatttctgtttgtgtgtttttttttttttggtgtatggttttttgatgttgatgtactactttatgtgcccagtagctcttcttgactag</cdnaseq>

Protein Sequence

<aaseq>MLAAAAAALRPAPTTAAFSPSTARSPPPTLLSFAPPRSHQRFHL SATAEGAGTTAAQEGASASASAPPVDEARLAQFAADWQAARAERDQGKILKLQVIRAN SGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDVTKDLVGSSISVKVVEVNEEERK LVFSEKDASWFTHSSLVKIGAIYDGIVGSVFHYGAFVHLRFPDGNYHLTGLVHISEVS WDLVQDVRDFLNEGDTVKVIVVNIDMEKSRIALSIRQLEEDPLLETLDKVIPLEADQS PSAGIISSDSSPSEADLLPGLDGICNELLQEDGYDFCLCVFFFLVYGFLMLMYYFMCP VALLD</aaseq>

Gene Sequence

<dnaseqindica>2090..2296#1919..2000#1342..1462#1103..1262#687..748#376..535#62..289#cccctccacggccactcattcctccctccccaccaccaccaccaccaccggcggcggcgcaatgctggcagcggcggcggcggctctccggccagcgcccaccaccgcggccttctccccctccaccgcgaggtccccgccaccaacgctcctctccttcgctcctccccgctctcaccagcgattccacctctccgccaccgccgagggcgcgggcaccaccgcggcgcaggaaggcgcgtcggcgtcggcgtcggctcccccggtcgacgaagcgcgactagcgcaggtgcggagatgttttgttcgtgctgtttttggtgcgatgttgacgcgcgtgtgatcgagtgagggtttcgtgttgtttggatgtagttcgcggcggattggcaggcggcgcgcgcggagagggaccaggggaagatcctgaaactgcaggtgatacgggccaacagcggcgggttgatcgtcaggttcaactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaggtagtcagtttctctagtttgagttgtttgcagaatttgtccagatttttgaaccagctctagctgcaattgatcgccggattaagaggtgattgcagctgtgggctaccgtaactgaactcatggtggatgtatggttttttccttgtagaccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggtaattaagaggcttcaattaccttttgagctaccaattagattatggtactataccatgcagtagtacaaacacatgctggttttggatcaaaacgctgatcaatgttacttttagtttgcttgtgtggcggaatttcagtattaaactgggtgtccctctccaaggaactgtgatattctttaactttgctttctaaactgcattatgattttttttcaagcacattctggcaaagttgtatcattggctttcaattctctattactatgggtacaatctaagagcgggcaccagattgtaggattcgaactttacacatttttcttcagaaactgaagctaattactttaggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttggttcactcattcttctctagtcaagattggtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgcgatttcctgatggtacccattggcaacaccccttgtcatttttgttggtaaatgttttgttgattttctgacaaaatctatcctcaaacaggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaacattgatatgtaagtatctaatacttctttactgtcttcctccacaattgtcagcatgtgtattcgcaatgtagtttctcgtgatctcattccatactttttcaagaaagtttgcaattatataatcaatgttgactgtaccaatgaaaaatagcatatgtttaattgaatctagcgatggagaatggcgcaatacaccttaaatctatatagattaggatttaacgatgcaataactattgagaacacagattgtctttaaggaataccaagttgatgcattgaaatagatcacttatgactcttgagggctgatgaataaaatgagaggagtttatgatctatttttttttcctatcattgctttcttcgcaatagggcaaatcagcatatgctggaagaattatcatgaatcagaaaattatgttacataatctgatactgatgcatttccttcacaaatagggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagacattggacaaagttattcctttggttagtttgtcgaaagcacgtgtctttgtggcaggttatttagctttgttattttaaaggtcaactcatgcattaatattggtttataggaggctgatcaatcacctagtgctgggatcatatcatctgattcatctccttcagaagctgatcttcttccaggacttgatggtatatgtaatgaactattgcaagaggatgggtatgatttctgtttgtgtgtttttttttttttggtgtatggttttttgatgttgatgtactactttatgtgcccagtagctcttcttgactagagaacagttttgttaaccaggagggaacccatgaataggtttttacgttgcaatctccatgttttaatcagttctatttcttcacagtataacagacgtacagtttgggcgccgagcattggagaaacgtgttgtttcacaagatctggaactctggctttccagtgtatgatccaaaatgtctccaatttaaccagtcgaagctcacaagatagaaacatggactgatgtgttggatctcattgtgcaggtgccagctaaggacaatcagttcaagcttcttgctcgagctgggcgacaggttagtttcttcttgatatagcactgttttcttgttataaggagtttcattaggcaaggattgatgtttagtcggttttcagtcccaactgaacagaaaacaaaggtacatcctgtaaaaccaaaatatcaaacaagtcttcaaaatggttacaccggaagttagtacgacaagttttgtgaaagattgtaatggttgtctgatgagcgtgccgttggaataattgttgtagttgtgtgacagagtgtaagtaaaaaattataatcctttaaactggcaggtccaagaactatatttgacaaccagcctagaccaggagggcataaagaaggcggtacagagagtactaggacgtgttccttgagtttggagaacagcgagtatgaggcagcatgcctgtactccccccaattttctgaccaaccgactatagtgaaacaacagcacgagcagacaacctgaaaagttcgtcgttgtttcctcattctgatgctgagcttcctctcagctggagactacttaaccgaaaattgcaaattttgtcagtaatacaatgagtaggtagttatcttcgtgcatgcatgtacctatctgaaacctcaaggccacctgtatatatatcagtattcatcttcagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0844900, RefSeq:Os03g0844900