Difference between revisions of "Os03g0859500"

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(Created page with "{{JaponicaGene| GeneName = Os03g0859500| Description = ABC transporter related domain containing protein| Version = NM_001058502.2 GI:297602011 GeneID:4334858| Length = 51...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0859500|
 
GeneName = Os03g0859500|

Revision as of 19:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0859500

Description

ABC transporter related domain containing protein

Version

NM_001058502.2 GI:297602011 GeneID:4334858

Length

5150 bp

Definition

Oryza sativa Japonica Group Os03g0859500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:37124194..37129343

Sequence Coding Region

37124456..37124728,37124844..37124951,37125043..37125315,37125526..37125612,37125688..37125879
,37126444..37126572,37126690..37126803,37127388..37127559,37127832..37128118
,37128592..37129116

Expression

GEO Profiles:Os03g0859500

Genome Context

<gbrowseImage1> name=NC_008396:37124194..37129343 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:37124194..37129343 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacccgtaccggtcatcgtcttcgtcggcgagcagccccgccgccgccctcgccatgggccgccgccattactacctgcccgccaggcccgcgcgacccatctccttcgaggactcccccgactgggccgacgacgacgtcgactccatccacctcgcaaccgcatcggcgtcggcgtcccttcccaccaccgcttacccctctccgagtccgacgccctcctcctcctccgccgcctgcagaggaggagagcgcaaggtggccggtgccaccctggtgtggaaggagctcagcgtctccctcactcgctcacgctcaggctcaggctcagctgaccgccgcgtcgtcaagagctccaccggctacgcgctcccaggcaccctcaccgtcatcatgggccccgcccgctccggcaaatccactcttctccgggcaatcgctggccgcctgcgccccgccgagcggatgtacggccaagtcttgctcaacgccaccaacacacgcttgccttatggatcttatggttttgttgatcgacacgatgtgctaatcgactctctcacagtacgggagatgctatactactccgcgcacttgcagcttccgggcctattctcctcaaagacctccatagtcgaagatgctatcgcagccatgtccttagctgactatgctgacaacctcattggtggccactgttttatcaacagcctcccagctggagaacggaggcgcctcagcattgcaagagagctagtgatgagaccacacgttctgtttatcgacgagcctctctatcatcttgacagtgtttctgcacttctactgatggtaacattgaagaaacttgcgagcacaggatgcacagtcatcttcacaatgtatcaaagcagtacagaagtttttggacttttcgatcgaatctgcttgctttcaaatgggaatacactcttttttggagaaacattgtcttgcctacagcacttctcaaatgctggctttccatgtccaatcatgcaaagtccatctgatcacttcttgcgggcaatcaatactgattttgacagaatcatagccatgtgcaaaaatttgcaggatgatcaaggggacttttcatcagtgagcatggacacagctgtggcaatccgtacgctggaagcaacatacaagtcatcagctgactctgttgctgttgaatcactggttgcgaaattgatggagaaggaaggtcctcacttgaaaagtaaaggcagagccagtaatacaacacgaatcggtgttctcacctggagatcattggtaataatgtcaagaaatcggaaatatttctggagcagatttgccttgtatatgcttcttgccctctcagtcggcaccatatttaacaacgctggtcattcattatcatctgtaatggtaagggtttctgcaatatttgtgtatgtatcatttgtcatccttctaagtgtttctggagttcctgcccatattgatgagatcaagatatattcccatgaggaagcgaatcagcattcgagtacaatggttttcctgctagggcacttcctgtccagtattccgtttctatttctggtcactatttcgtcatcgctggttttctacttcctgataggactcaggaatgagttcaacttgtttatgtattttgtggtgaccatgttcatgtgcctgttggcaaatgaggcacttatgatgattgttgcttacatctggctcgacacttacaagtgcaccttaactctcatttgcttatacgttatcatgatgcttgtgggtggatattttcgaatccgagggggtctaccgtgcacagtatggaagtacccattgtcgtacgtttcgttccatgtgtatgcagttgagggtttgcttgagaacgagtatgtgggcacatcgtttgcggtcggtgcgataaggacgataccaggtgtccaagcagttgggggctcatacgacatctcgtcttcagcaaacgcaaagtgggtaaatctgctggttttgtttgtgatggcagttggataccgtgttgttctctacgtgttgcttcgtctgaatgtaaggaaacacatgaggttgcttggcagctggtgctgctggagctggacaccgcaaagtgactactactccagtaactag</cdnaseq>

Protein Sequence

<aaseq>MDPYRSSSSSASSPAAALAMGRRHYYLPARPARPISFEDSPDWA DDDVDSIHLATASASASLPTTAYPSPSPTPSSSSAACRGGERKVAGATLVWKELSVSL TRSRSGSGSADRRVVKSSTGYALPGTLTVIMGPARSGKSTLLRAIAGRLRPAERMYGQ VLLNATNTRLPYGSYGFVDRHDVLIDSLTVREMLYYSAHLQLPGLFSSKTSIVEDAIA AMSLADYADNLIGGHCFINSLPAGERRRLSIARELVMRPHVLFIDEPLYHLDSVSALL LMVTLKKLASTGCTVIFTMYQSSTEVFGLFDRICLLSNGNTLFFGETLSCLQHFSNAG FPCPIMQSPSDHFLRAINTDFDRIIAMCKNLQDDQGDFSSVSMDTAVAIRTLEATYKS SADSVAVESLVAKLMEKEGPHLKSKGRASNTTRIGVLTWRSLVIMSRNRKYFWSRFAL YMLLALSVGTIFNNAGHSLSSVMVRVSAIFVYVSFVILLSVSGVPAHIDEIKIYSHEE ANQHSSTMVFLLGHFLSSIPFLFLVTISSSLVFYFLIGLRNEFNLFMYFVVTMFMCLL ANEALMMIVAYIWLDTYKCTLTLICLYVIMMLVGGYFRIRGGLPCTVWKYPLSYVSFH VYAVEGLLENEYVGTSFAVGAIRTIPGVQAVGGSYDISSSANAKWVNLLVLFVMAVGY RVVLYVLLRLNVRKHMRLLGSWCCWSWTPQSDYYSSN</aaseq>

Gene Sequence

<dnaseqindica>4616..4888#4393..4500#4029..4301#3732..3818#3465..3656#2772..2900#2541..2654#1785..1956#1226..1512#228..752#gagtggagtagcttgctggggcttttcccctcgcagcgcaggccgctgcttcttcttcttcttccttccaaattgcaaatcgcaatgccaaagccgtcgcggcatccaatcttctccttctccttcacctccacaagctaggagtaataagctactagtatgtactagttgttgcttgttactagtactagctagctactggagtactcctagtaggcagtaggcatatggacccgtaccggtcatcgtcttcgtcggcgagcagccccgccgccgccctcgccatgggccgccgccattactacctgcccgccaggcccgcgcgacccatctccttcgaggactcccccgactgggccgacgacgacgtcgactccatccacctcgcaaccgcatcggcgtcggcgtcccttcccaccaccgcttacccctctccgagtccgacgccctcctcctcctccgccgcctgcagaggaggagagcgcaaggtggccggtgccaccctggtgtggaaggagctcagcgtctccctcactcgctcacgctcaggctcaggctcagctgaccgccgcgtcgtcaagagctccaccggctacgcgctcccaggcaccctcaccgtcatcatgggccccgcccgctccggcaaatccactcttctccgggcaatcgctggccgcctgcgccccgccgagcggatgtacggccaagtcttgctcaacgccaccaacacacgcttgccttatggatcttatgtatgttatatatgcgcccccttctttatgctatttcaattccatccatatatctttgcttcatatttaatttcttccttgttttttactaagccttgtttagttggagaaaattgttgtcacatcggatatacggacacacatttgaagtattaaacgtagtctaattacaaaacaaattacagattccgtcaggaaactgcgagacgaatttattaagtctaattaatccatcattagtaaatgtttactgcagcaccacattgtcaaatcatggcacaattaggcttaaaagattcgtctcacgatttacacgcaatctgtgtaattgtttttttttacctacatttaatactctatacatgtgttaaacattcgatgcgacagcgtgaaaatttttgttttgcgaactaaacagggcctaaattaaattaattacatggctttttatgccttctgttggagacttgcagggttttgttgatcgacacgatgtgctaatcgactctctcacagtacgggagatgctatactactccgcgcacttgcagcttccgggcctattctcctcaaagacctccatagtcgaagatgctatcgcagccatgtccttagctgactatgctgacaacctcattggtggccactgttttatcaacagcctcccagctggagaacggaggcgcctcagcattgcaagagagctagtgatgagaccacacgttctgtttatcgacgagcctctctatcatcttgacaggtttgtttcattgccattccatagggatcaaagtaactattgctgctttctctcctctcatatctttgtatatcacaatcccaagaaaaaaattgccagcttcaactatttctgtatgcatgagaatgtttgactttcacatgcgcgctaatatgacaatcagtacaatcctatttgatagattagtagatccagcagtcatatgtggatgctgtctttgcatatgtacagagttaaaaagcgcaaccctgttcttttttcttttgctgcagtgtttctgcacttctactgatggtaacattgaagaaacttgcgagcacaggatgcacagtcatcttcacaatgtatcaaagcagtacagaagtttttggacttttcgatcgaatctgcttgctttcaaatgggaatacactcttttttggagaaacattgtcttgcctacaggtatctttttgtacattttacatgcattcccattttagcacttggttggaattacaatattctgttgggagtgttctcagtatggctgtcaccttgatgtaattcagtaattgtctcgtatcaatagaagcttccttttatctaagaaaggtattgtttggattagaactattgagttctgtagtttggatatgtcggtcatgaaagttgctctaaaattacatggctagtttttgtagaggaatttacaggactaattagttcagtacttgagcatgattgtgtttactggaggacactaaatcagaaacccatgccaggctccaagtaacattggtagtaagtaatcaaagagtcctgtgcaaaataaactgtactagttagtaacaagataataataataataataataataataataataataataataataataataataataataataataataataattttccttaatacaatgatgcgctgcttgtgtattaccaaatttttttttcctgatttgtttgtcgtactctcatccgatgccttgtgcacaattcttgttttgccttttcctgttgcagcacttctcaaatgctggctttccatgtccaatcatgcaaagtccatctgatcacttcttgcgggcaatcaatactgattttgacagaatcatagccatgtgcaaaaatttgcaggtatctaatagacccatcttgacatgagatttcatttttatttccgacccgttactcaagtcaatgcagaaatattcttttgtagtaagagataaaaacctttgtagttactaacaggatgatcaaggggacttttcatcagtgagcatggacacagctgtggcaatccgtacgctggaagcaacatacaagtcatcagctgactctgttgctgttgaatcactggttgcgaaattgatggagaaggtacctgttgctaaacacactagaaaaggaaatgagttatctcattctttcatcctgcacattgtacataattgtttcagaccatggtcagttaaaatgatgtaatcacctcgctttggatttatttttacaatggagaaatatcattatgcatccaacacattatgcgcattaatatatatatttatatattgatgcattgaagtcgccttcttccatatactctaattaagtaattgtttggcagttggcacagccacaaagattgttgcacatctttctggatgttgttataatggtttacaacctgatgctcctgttccctttggagaattttggttgtgctccagcctccaatcaagacacagctagcaacagggaatacggcaacctggttgtcctggtgtaatctaaaccacactaattatgggggccttaaaatccagtacaatatagtttaggatagttagtactactacccagtattgcagtgcacatataattgatgttgtgtggttttacattaatccgtccccttcttttttcttacatgatgtgctgcaggaaggtcctcacttgaaaagtaaaggcagagccagtaatacaacacgaatcggtgttctcacctggagatcattggtaataatgtcaagaaatcggaaatatttctggagcagatttgccttgtatatgcttcttgccctctcagtcggcaccatatttaacaacgctggtcattcattatcatctgtaatggttagtaccattactctgttgcgtttgaatctattaaatgtatgatatgatgataagactacgttgtttcaacaggtaagggtttctgcaatatttgtgtatgtatcatttgtcatccttctaagtgtttctggagttcctgcccatattgatgagatcaaggtgaaagttttggtctttaccacttcattcttatttgtgttctttattgttaacagagtaattctttttttttttaatactgagacatagtcctactgttacttatgatatatagtacacaactacacattaacaaaagaaaaggtactaggtttgtccaggcactacaatctattaatatcgcaaattgttttcatcctatatatgcagatatattcccatgaggaagcgaatcagcattcgagtacaatggttttcctgctagggcacttcctgtccagtattccgtttctatttctggtcactatttcgtcatcgctggttttctacttcctgataggactcaggaatgagttcaacttgtttatgtattttgtggtgaccatgttcatgtgcctgttggcaaatgaggcacttatgatgattgttgcttacatctggctcgacacttacaagtgcaccttaactctcatttgcttatacgtaagcctaccttttgctcgtcattttaagaagaaatagtatgtgtcagttggatcaatgttgaataacaatacttgtgccattgattcaggttatcatgatgcttgtgggtggatattttcgaatccgagggggtctaccgtgcacagtatggaagtacccattgtcgtacgtttcgttccatgtgtatgcagttgaggtaataagtggggaaatttctttctttgtactagtaataagtattatggatgattggggttgggaaacatatagggagagcgagtgataataacaatagtggtgcgtgggtgcagggtttgcttgagaacgagtatgtgggcacatcgtttgcggtcggtgcgataaggacgataccaggtgtccaagcagttgggggctcatacgacatctcgtcttcagcaaacgcaaagtgggtaaatctgctggttttgtttgtgatggcagttggataccgtgttgttctctacgtgttgcttcgtctgaatgtaaggaaacacatgaggttgcttggcagctggtgctgctggagctggacaccgcaaagtgactactactccagtaactagtgtgccgtccaagtagcctctgtctaatgaatgaatccaggtgactcaactgactcctcgtctgccatgtaccatcatgtagagtacaagggggcgaaatgcatgcacatgtatattcattcttgatcatgcttacatatgccgtactgtgtctgtctatgtatgtttgtactatgtatcacagacggacatacagacggtttagtttggggattgaattgaagatgatattatcttgttgtcctgagtatgtatatgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0859500, RefSeq:Os03g0859500