Difference between revisions of "Os02g0133700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0133700| Description = SMC protein, N-terminal domain containing protein| Version = NM_001052342.1 GI:115444054 GeneID:4328214| Length = 16...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0133700|
 
GeneName = Os02g0133700|

Revision as of 19:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0133700

Description

SMC protein, N-terminal domain containing protein

Version

NM_001052342.1 GI:115444054 GeneID:4328214

Length

1649 bp

Definition

Oryza sativa Japonica Group Os02g0133700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1780356..1782004

Sequence Coding Region

1780356..1781117,1781282..1781353,1781422..1781489,1781588..1781626,1781844..1781919
,1781990..1782004

Expression

GEO Profiles:Os02g0133700

Genome Context

<gbrowseImage1> name=NC_008395:1780356..1782004 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1780356..1782004 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatataaagaaggttgtggtagaaggatttaagagctacagggaggagatctcaacagaacctttcagcccaaaagttaatgtcgttgtcggtgcaaatggatctggcaaatcaaacttcttccatgctatacggtttgtccttagtgacatgtttcagaacctgcgcagtgaagacaggggagcccttcttcatgaaggtgctgacatctcagttctttcggctttcgttgagatagtgtttgataattcagacaaccgtattccactgaaaaaagaggacctacagcctcttgttgacaaggttgcccgatggctgcccacatggaaatctaatcagatgtcgtcgatcggtcgtgtaaccatggtcaatgctgtcttgagcgccataccaatctatctattggtcgcaattgatgcacccaagtgggtgatcaaaggtattgataaggtacggcgtggttttctttgggcgggtaaggcgcaagtgaatggtggatgctgccgggtagcctggaccaaagtatgctcccccaaggattatggaggtcttggtgtgccaaacttgaagctcatgggcattgcactacgttcccgctggacgtggatgcaaaggacctctctgaccaagccttggcagggattggaaatcccttgctcacagaaagaacttcaccttgtcgccgcctccaccgtctgtcagctaggtaacgggcaaacaatccttttctgggaggacaattggttgcaaggaggaaccatccgagctattgcactctccatctacgatcatgtctctactcgtattcggaagcgccggacggtggctgaagcgttgtctaaccgtagatggatcaaggacataagtggcgcgcttgggactcaggcaatactcgaatacctcaaactttggtcgctgattcagtcagttgattgttcttccgcagagcccgactcactctcctggaagtgggaaagctcaggcaaatacacttcaaaatctgcctaccgagctttgttccttgggtga</cdnaseq>

Protein Sequence

<aaseq>MYIKKVVVEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHA IRFVLSDMFQNLRSEDRGALLHEGADISVLSAFVEIVFDNSDNRIPLKKEDLQPLVDK VARWLPTWKSNQMSSIGRVTMVNAVLSAIPIYLLVAIDAPKWVIKGIDKVRRGFLWAG KAQVNGGCCRVAWTKVCSPKDYGGLGVPNLKLMGIALRSRWTWMQRTSLTKPWQGLEI PCSQKELHLVAASTVCQLGNGQTILFWEDNWLQGGTIRAIALSIYDHVSTRIRKRRTV AEALSNRRWIKDISGALGTQAILEYLKLWSLIQSVDCSSAEPDSLSWKWESSGKYTSK SAYRALFLG</aaseq>

Gene Sequence

<dnaseqindica>888..1649#652..723#516..583#379..417#86..161#1..15#atgtatataaagaaggtatgttctgctgttctgattttgatgacatgttggtccgtgtcgactcagaagctgtctgtctgtgcaggttgtggtagaaggatttaagagctacagggaggagatctcaacagaacctttcagcccaaaagttaatgtcgttggtaatttcttcctccccatctaaccaacatgtccatgagtttttgccagcttgtgcatggctagtttaaggcgctgttcggattgtcctgcagtttcctgcacttgccttgttttcttgggggtgcaggggagataattgcaatatttgatgactatagtaatctttgtatgcgttaattgtatacaaactaacataaatctgcatgtttatcacagtcggtgcaaatggatctggcaaatcaaacttcttccatggtaatattttttagatatgtgatgttgctagctagtaggttattattcttatgcttatgtgatacttttctcctaacttgggcattctaatgctccagctatacggtttgtccttagtgacatgtttcagaacctgcgcagtgaagacaggggagcccttcttcatgtacgcatcctctctctttgatttagttgagataggtgtttgctatttgataacaataaccatttcaggaaggtgctgacatctcagttctttcggctttcgttgagatagtgtttgataattcagacaaccgtattccagtaagtcctctaatatttttttttaccgggagtaggtcctctaattcgttgatcaaaattcatttgatttaaattatctagctctccagatgcacattctatttatgaaaatgcatcaacaactatgagatctttcatgtgagtgcatgctattcatcttcaagctgaaaaaagaggacctacagcctcttgttgacaaggttgcccgatggctgcccacatggaaatctaatcagatgtcgtcgatcggtcgtgtaaccatggtcaatgctgtcttgagcgccataccaatctatctattggtcgcaattgatgcacccaagtgggtgatcaaaggtattgataaggtacggcgtggttttctttgggcgggtaaggcgcaagtgaatggtggatgctgccgggtagcctggaccaaagtatgctcccccaaggattatggaggtcttggtgtgccaaacttgaagctcatgggcattgcactacgttcccgctggacgtggatgcaaaggacctctctgaccaagccttggcagggattggaaatcccttgctcacagaaagaacttcaccttgtcgccgcctccaccgtctgtcagctaggtaacgggcaaacaatccttttctgggaggacaattggttgcaaggaggaaccatccgagctattgcactctccatctacgatcatgtctctactcgtattcggaagcgccggacggtggctgaagcgttgtctaaccgtagatggatcaaggacataagtggcgcgcttgggactcaggcaatactcgaatacctcaaactttggtcgctgattcagtcagttgattgttcttccgcagagcccgactcactctcctggaagtgggaaagctcaggcaaatacacttcaaaatctgcctaccgagctttgttccttgggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0133700, RefSeq:Os02g0133700