Difference between revisions of "Os02g0153000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0153000| Description = Protein of unknown function DUF547 domain containing protein| Version = NM_001052458.1 GI:115444286 GeneID:4328332| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0153000|
 
GeneName = Os02g0153000|

Revision as of 19:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0153000

Description

Protein of unknown function DUF547 domain containing protein

Version

NM_001052458.1 GI:115444286 GeneID:4328332

Length

3246 bp

Definition

Oryza sativa Japonica Group Os02g0153000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2928920..2932165

Sequence Coding Region

2929076..2929234,2929322..2929809,2930429..2930528,2930686..2930745,2930831..2930923
,2931007..2931126,2931407..2931751

Expression

GEO Profiles:Os02g0153000

Genome Context

<gbrowseImage1> name=NC_008395:2928920..2932165 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2928920..2932165 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggtcaacacaacaagatttatactctgaacttgaatatgaacaagatgttggagaagatcctgaggagagacaaatggtttctctaaatagactatttgaaaaacaccgggatgtttctttaaatagacttctggaaaaacaccgggatgaagagatgcaagaatcttgctctactgataaagaaggcgaagaagatgagaagattgatactctatcatttgaacaatccatactaaagataactagcatgaaattagggaatctttggaacaatcctaaccagctctcagaggagatggttcgttgcatgagaaacattttcctccgtctatctgaatcctcgaagatgttaccaaaggaatcttctgattgttcatcttcctcagcagaacgtctttctggttctacactggcatccttctcagattcatccatcattccctcaatgctacgaagtccttcagttgactcgaatcgcaatgatgagatgacaactgaagccagcaactttgatccatataaagttaatgggaaggaaagccgaagagatattggaaattatcattcagcagctgaagtatcttggatgtctgttggaaaggagcaacttgaatatgcatctgaagctctaaaaaaattcagatttcttgtggaacagctatcaaaggttaaccctaatagtatgaactgtgatgagcggctagccttttggattaatttgtacaatgcactgattatgcatgcatatctagcatatggagttccacgaaatgatatcaagcttttttccctaatgcaaaaggcctgttacacagttggtggtcagtctttcagtgctgctgaaatagaatttgtgattctaaagatgaagactccagtgcatcggccccaactttccttgatgctagctcttaacaagttcaaaattactgaggagcacaagaaatactcgattgatgggacagaaccccttgtgttgtttggactcagctgcggaatgttctcttcacccgccgtgaggatcttctctgcagcaaatgtccgtcaggagcttcaggaatctttgagagactatgtccaagcgtctgttggtataagcgaccgagggaaactgctaatcccaaagttactgcagagctatgccaaggggaatgtcgaagattctttgctcgctgactggatctgccatcaccttacacctgatcaagttgcagtcatccgagattcttcttcacagcggaagcagcggcttcttggagcacgcagttttactgttgttgcattcgactcaaaattccgctatctgttcttgcctgacagcagtggctcccagaagccagaacccaaacggacttcgtga</cdnaseq>

Protein Sequence

<aaseq>MRSTQQDLYSELEYEQDVGEDPEERQMVSLNRLFEKHRDVSLNR LLEKHRDEEMQESCSTDKEGEEDEKIDTLSFEQSILKITSMKLGNLWNNPNQLSEEMV RCMRNIFLRLSESSKMLPKESSDCSSSSAERLSGSTLASFSDSSIIPSMLRSPSVDSN RNDEMTTEASNFDPYKVNGKESRRDIGNYHSAAEVSWMSVGKEQLEYASEALKKFRFL VEQLSKVNPNSMNCDERLAFWINLYNALIMHAYLAYGVPRNDIKLFSLMQKACYTVGG QSFSAAEIEFVILKMKTPVHRPQLSLMLALNKFKITEEHKKYSIDGTEPLVLFGLSCG MFSSPAVRIFSAANVRQELQESLRDYVQASVGISDRGKLLIPKLLQSYAKGNVEDSLL ADWICHHLTPDQVAVIRDSSSQRKQRLLGARSFTVVAFDSKFRYLFLPDSSGSQKPEP KRTS</aaseq>

Gene Sequence

<dnaseqindica>157..315#403..890#1510..1609#1767..1826#1912..2004#2088..2207#2488..2832#caacttgcacgtgcacatgggaagaagtaagtttttttttttttttaagtaaatatatctgtcttctttctgatgttggagttattgataccttcttgttatctttcttagcacatatcatcattgagagatttaaagtttggaggatctgagtcaatgaggtcaacacaacaagatttatactctgaacttgaatatgaacaagatgttggagaagatcctgaggagagacaaatggtttctctaaatagactatttgaaaaacaccgggatgtttctttaaatagacttctggaaaaacaccgggatgaagaggtccttctcatgcctatttgtatagttttggaagatagttaattgtgctagacatattcgtgcaaggtttgatttatctctctgcagatgcaagaatcttgctctactgataaagaaggcgaagaagatgagaagattgatactctatcatttgaacaatccatactaaagataactagcatgaaattagggaatctttggaacaatcctaaccagctctcagaggagatggttcgttgcatgagaaacattttcctccgtctatctgaatcctcgaagatgttaccaaaggaatcttctgattgttcatcttcctcagcagaacgtctttctggttctacactggcatccttctcagattcatccatcattccctcaatgctacgaagtccttcagttgactcgaatcgcaatgatgagatgacaactgaagccagcaactttgatccatataaagttaatgggaaggaaagccgaagagatattggaaattatcattcagcagctgaagtatcttggatgtctgttggaaaggagcaacttgaatatgcatctgaagctctaaaaaaattcaggtttgatgctgcaacctaggctaaaactgcctgtcctaatgtcaaacatactgcatgttatgaggttcatatgaagcatgtttttttttgaaacactcgttcatatgtatgatactatcagcatactatgcacatttctaatctcattttactgttgatgcctaagtgaatttacaaacaattgaactgttatgaggtttgtaccgagggaagaatgagatgcttcttgtaatcttttattttcaggaaacacaaaccgtattatattttatattttggaaccccacaacttgttgtcatttttagccctgaaaggaatccctggcagtgtgtaatttatccatatttgaatgtgttaacgagcactcttttccatgccactttgacttatctttgatgtatgataaaactttcaaccccaatgtcttgctgatgagcaaacaaatgttaacacatactcactacatctcataataaatgttttctttgcgacgctttccaagttttttggtctattttctgtcaattacggtgttcctcattgaagaccatctttaattcttactaatacttatgttgaatgtaagtgtaacaaataaccatgcctttgtatttacagatttcttgtggaacagctatcaaaggttaaccctaatagtatgaactgtgatgagcggctagccttttggattaatttgtacaatgcactgattatgcatgtaagtatgttaccaaagagactggctttgcaaacaagtcctgcactgatgatttatgcatatttctgttcctcatatttcattttgcttttactacgtatttctttctcactagactaatactatatactaaattttctgtactggtttctatcaggcatatctagcatatggagttccacgaaatgatatcaagcttttttccctaatgcaaaaggtttgagcaggatctcttctctgaacaaaaaatgtataacactttcttcaatatggatttcaattaacacgtgctagcgatgcaggcctgttacacagttggtggtcagtctttcagtgctgctgaaatagaatttgtgattctaaagatgaagactccagtgcatcggccccaacttgtatagctttttctataacctatttattttccatttgcttataaatcataacgcctctcattggtgtccctacctttctatagtccttgatgctagctcttaacaagttcaaaattactgaggagcacaagaaatactcgattgatgggacagaaccccttgtgttgtttggactcagctgcggaatgttctcttcacccgccgtaagtatatgagttttatcattgttttcatgtaaatatgtgtgtattgtactatttgttcagcaaatattgcaatcgccaagtgcatgtttctgcagcaaccattgcgctaccaaacaatattgcttgcttcaaatccttgttcagatgctatagtaacatgttctttcaatgacgtttgaacatccacactgtcgtaactattaacatatcaagctgttattttccttttcctctttttatttttttaacaatcttgtgatgatctgccgtcatacaggtgaggatcttctctgcagcaaatgtccgtcaggagcttcaggaatctttgagagactatgtccaagcgtctgttggtataagcgaccgagggaaactgctaatcccaaagttactgcagagctatgccaaggggaatgtcgaagattctttgctcgctgactggatctgccatcaccttacacctgatcaagttgcagtcatccgagattcttcttcacagcggaagcagcggcttcttggagcacgcagttttactgttgttgcattcgactcaaaattccgctatctgttcttgcctgacagcagtggctcccagaagccagaacccaaacggacttcgtgagctgtgttcagaaaacacatgctatgagcgagtatgtttggtcctagaaccatttcttgcatactggacaatggagtagctagttgtatatgatgtaaatttttggaggaagagtatatgatgcaacaaagatgagaagctggagggtgatacaaagagctccagtaaggatacaggatagttcatatgtatgatcagattatctcagctgaattggcgatgaaggttcatctggatctcattttgttctgttactgtctttccataatgaagataaccttttgtaatttttgttttcgacatacctttttttgggggtatagttcttgatcttggtcaattgatttgtaagttgtgctctaaataatgtatagtgcttttacctctttataataatgtgagttactttgtcac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0153000, RefSeq:Os02g0153000