Difference between revisions of "Os10g0390600"
(Created page with "{{JaponicaGene|
GeneName = Os10g0390600|
Description = Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transam...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os10g0390600| | GeneName = Os10g0390600| | ||
Revision as of 21:07, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os10g0390600 |
|---|---|
| Description |
Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT) (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) |
| Version |
NM_001071040.2 GI:297610423 GeneID:4348525 |
| Length |
5034 bp |
| Definition |
Oryza sativa Japonica Group Os10g0390600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:13333507..13338540 |
| Sequence Coding Region |
13333647..13333697,13333769..13333822,13334327..13334377,13334507..13334570,13334655..13334718 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:13333507..13338540 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:13333507..13338540 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcttcgcgccgccgcccgcgcgctcaccgtcagctccctcaacccaaaggtgctcgcgctggcggatcaccacctcggcggactcgtcgcccgccgcgcgcagagcatgcaacaagagctagacgctaatccagcttcacatcctttcagtgagatcatctattgcaaccacagcaacccacagtcccaagggcagcaaccaaacaagttcttccgggaggttcttgcattgtgtaatcatccccatctcctagaccggagtgaggccagcttcatgttcagctctgatgcgataacgagggcacgggagattgtaggcttcattcctggaaaaacaactggaggatacagtcactgtcagggtattgaagggttgcgtgatgcaattgctgctggaatagcttctcgcgatggtttaccgtcgtattcggaggacattttcctgacagatggagcagctgcaccggttcatatgatgatgcacttgttgatacgtggcaagaaggacggcatcctttgcccaattccatcacactctttgtacacagattctatggttcttcgtggcgcaactcttgtaccgtattaccttgatgaatccagaggttggagtgtgaacatttcagatctgaagaaacagttggatggtgcccgggcaaagggcattgatgtgaggggacttgtggtggtaaatccgggaaaccctactgggcaggttcttgtggaggaaaaccagtgtgaaatagtggagctctgcaagaatgaatgccttgttctcctagcagatgaggtttaccaagaaaacatttacacggatcagaagaaatttaactccttcaagaaggtagcacggtccataggctatggggaaggggatatatctttagtatcattccactcagtatctaatggatactacggagaatgcgggagaagagggggttacatggaggtcactggcttcagctcggaagtaaggggagaagtatacaaagttgcatccctaagcgcatgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaaggttggagatgagtcatacccctcttatcgtgcagaaagagacagcatactatcatctttgtcttgctgtgcagaggccatggtgtccacattcaacagcatggaagggatgacttgcaacaaggctgaaggtggaatatctgtgttccctagtgttcggctgccgccacgggcaattgaagctgctgaggcgatgaacacagagccggatgtgttctatgctctccgtcttctcgaaagcactgggattgttgttgtgcctggctcagtgtttggacaagtacctggaacatggcatttcagatgcacaattctgccacaggaagagaagacacggcagattatctcccgctttaatgtgttccatgaagcatttatggaagaattccgcagctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MLRAAARALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDAN PASHPFSEIIYCNHSNPQSQGQQPNKFFREVLALCNHPHLLDRSEASFMFSSDAITRA REIVGFIPGKTTGGYSHCQGIEGLRDAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMM MHLLIRGKKDGILCPIPSHSLYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGA RAKGIDVRGLVVVNPGNPTGQVLVEENQCEIVELCKNECLVLLADEVYQENIYTDQKK FNSFKKVARSIGYGEGDISLVSFHSVSNGYYGECGRRGGYMEVTGFSSEVRGEVYKVA SLSACSNISGQILMSLVMNPPKVGDESYPSYRAERDSILSSLSCCAEAMVSTFNSMEG MTCNKAEGGISVFPSVRLPPRAIEAAEAMNTEPDVFYALRLLESTGIVVVPGSVFGQV PGTWHFRCTILPQEEKTRQIISRFNVFHEAFMEEFRS</aaseq> |
| Gene Sequence |
<dnaseqindica>141..191#263..316#821..871#1001..1064#1149..1212#1311..1386#1470..1577#1984..2094#2184..2321#2403..2477#2575..2695#3982..4136#4235..4309#4425..4628#4825..4941#atccatggccgcctagcttagaggctcaccatcgtcacactggctcactgctgcattccgcattcctcgctcgctcacctcacctcacctcactcacctacatcgccggatcgatcgcaccgtcgccggcggccaacgagatgcttcgcgccgccgcccgcgcgctcaccgtcagctccctcaacccaaaggttttggatctttctgtttttttcttctctgtctccggcggctcgggctcactgatcttcttccgctgcaggtgctcgcgctggcggatcaccacctcggcggactcgtcgcccgccgcgcgcaggtaatcaatcaatcaatcaatcaatcccccccatttgctcacaatcacatgcatatgtgatatgcctcaatggggggacgaaagaatcctctctatttgatttgtgcgaaaaaatacgatatgccatctttgggaaaaaaaagttagaacgcgttggtttgtttgatcggcggtgttctttcttgattgggacaattggagttaggatcggagtaggtttagtctgcacatcgcaaactgcattgctcatttttttagctggtgacagtaacggttaatatccttatagtagagaggaaaaaaattttgcaagctgacacggtatagtgaaattcagactgtgtgattgttctaagagtttctttggtgaattgttattttcaaaacaagttccttcggtggattaatgattgttctcaattctagtattttgagattatgaaggggttgcagcttaatgccgtgatcaaactcatcttgttttttctgatttcttggttctagagcatgcaacaagagctagacgctaatccagcttcacatcctttcagtgaggtgcgttcatctgaatcttactttcagtaggaatgcctgacttttcagagttcctctgcatcttacttctattcagttcagagtttccctgagtttactatggctaatttcccccatttcttggagtagatcatctattgcaaccacagcaacccacagtcccaagggcagcaaccaaacaagttcttccgggaggcgtgtgcatgtgcccctatgaatttactagtcatttatcatattttattgatttctgatgattcttttcttttcatgctccaggttcttgcattgtgtaatcatccccatctcctagaccggagtgaggccagcttcatgttcaggtaagaactgaacagaaattgagtattcctgtcacaattgtacttatggaagagatgatctgcaagctatacgtgattgccaagttccaatgcttcagctctgatgcgataacgagggcacgggagattgtaggcttcattcctggaaaaacaactggaggatacagtcactgtcaggcaaattcaattgtttcagaattcagagcaaatgctgacaaatatgggaatgagctttcatcaaacttgactatttttgacagggtattgaagggttgcgtgatgcaattgctgctggaatagcttctcgcgatggtttaccgtcgtattcggaggacattttcctgacagatggagcagctgcaccggtactatttagtttgatcattatacacattgtttttttttttctggataatgatgcgactttttttttgtcactggtaactgttgggcctctggatagtattactcacatcaaactgttttgataaaagttgcggtttcgaagatgcaaccaacagttctcataatctgaaaactggcttgatattctacggatataagaacttcagtgaatggatgatttggtttaaagaaaaaacatatgagtagaatagcaagctagggttttttttttttgtctgataatgttgtctgttttgtacttcaatccttggcactaatatgaactatacatattcttagtatctgcctcatatctgataaggttttaaataatggagatcattgtgtttcttgatttccatataggttcatatgatgatgcacttgttgatacgtggcaagaaggacggcatcctttgcccaattccatcacactctttgtacacagattctatggttcttcgtggcgcaactcttgtgtgtaccacattaaccagacagaagcaaatctcgattgatactaattactgtcttgaaccaatctgatctaagaaagcaaatttcaggtaccgtattaccttgatgaatccagaggttggagtgtgaacatttcagatctgaagaaacagttggatggtgcccgggcaaagggcattgatgtgaggggacttgtggtggtaaatccgggaaaccctactgggcaggtttgtttacggatcactgaatcacgctatttctttgattttaaggagtcgaatgtgaatatgtgattgaattcctcgtaggttcttgtggaggaaaaccagtgtgaaatagtggagctctgcaagaatgaatgccttgttctcctagcagatgaggtgcccattgtatctttcttaataagaacatttgtagtattttcttccttggctattgcaaatatgacatttaccgtttcacgactatctttgataggtttaccaagaaaacatttacacggatcagaagaaatttaactccttcaagaaggtagcacggtccataggctatggggaaggggatatatctttagtatcattccactcagtatctaatggtacaaaccgtttactttgtctcattcatgatcgttctcaagttctagtatatgcaaatctttgtttattgcaacttgaaaaaataaaggcaactctgttgttacttgtgcttttgagttatggtccttttaactattagttttggaactcattgagagaaaaaaaatacacataagattttcagggaaggcaaatttctttgactgctacatgaatactatcgattgaatggagtgaatgctcttttataagctgaacttattacgtttacatgaagacggcctgactctatttacttatctagcatgccatgcactctacctatcaatatattggacatttctatttcccaagcactaagactccttgattaagaatgttcaccactatagatggccataaggcctgaggcctgatggcccggcccacggcacgaccattttgcctggcccaagcatggcatggcacgactggtgtcgggcccgtgtcggcctggcccgacagttgggccgtgcctaggtcgatgccttagcacggtgggccggcccgacacaacacgatcaaagaaaataagttgagggatccaaaatagacttaaatcagctatataaggcatggcccaaagagaagagggatacagaatagacttatgccattcataaaagccacagcccaaagagatgagggaagaaaaatggacttaatatatggagaagcacgatgggctgtccgctgtcgtgccttcgggctggctcggcacagcccgagacttattgggccgtgcctaggccgtgtgtgcagcccgtgggctgacccaacctggcctggcatgtaggtcgggccgtgccggcccgactgacctcggcccatgcccgttcgttcctgggtcgtgccgggccgggcagcccatatggccatctatattcaccacaatgtattttttttttcttttcattctccaataaaatcctgtttataaagagggcctaactctatctacttatctagcatgccatacactctgcctatcaatatattggacatttctcgttcccaggcactaagacggtccttgattaagaatgttctccacagcgtgttttgtttctttttccaatcaaatcctgtatatcgatcttttctgccaaattctaagtagtctgaactgttggatgtgatgcagcatgcattacaaattctttattgatcagtatacaacattacaactacatactctttgttgatggatgtgataagtgataacaagtattgtccttttcatcaggatactacggagaatgcgggagaagagggggttacatggaggtcactggcttcagctcggaagtaaggggagaagtatacaaagttgcatccctaagcgcatgctccaacatatctggccagatccttatgagcctagtcatgaacccaccaaaggtctctgaattcttcaccttcggcatcgactttttttgtttttctttaagggaagacatcaacattttgcataacttaataatcctcccttttgtcaggttggagatgagtcatacccctcttatcgtgcagaaagagacagcatactatcatctttgtcttgctgtgcagaggtatcttatttctttcttcaatacaatgatttaaagctctgacttgttacgatttcactgcggtaaagaccatggttggccaaaactgaatgttgcatttgtgcactggttttaggccatggtgtccacattcaacagcatggaagggatgacttgcaacaaggctgaaggtggaatatctgtgttccctagtgttcggctgccgccacgggcaattgaagctgctgaggcgatgaacacagagccggatgtgttctatgctctccgtcttctcgaaagcactgggattgttgttgtgcctggctcagtgtttggacaagtgagtacaatattcttacatctatctacttgtatattattcagagtagaatataaacttaagacatggtttttatacttttcaatgattagatgttcaagcattaatacatgttcgttgatcttgcagaaaaatattcctttttctttctgctggtattctaacaaatgttcctcttgttggttatattctgcaggtacctggaacatggcatttcagatgcacaattctgccacaggaagagaagacacggcagattatctcccgctttaatgtgttccatgaagcatttatggaagaattccgcagctaaaaggcgcaaacattctttttccatatgtagtataactctatgtactttctatgactgataagtgataagtgataagtgtgagatttctacctg</dnaseqindica> 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| External Link(s) |
