Difference between revisions of "Os02g0157100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0157100| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001052483.2 GI:297598621 GeneID:4328357| Len...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0157100|
 
GeneName = Os02g0157100|

Revision as of 19:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0157100

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001052483.2 GI:297598621 GeneID:4328357

Length

4392 bp

Definition

Oryza sativa Japonica Group Os02g0157100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3122176..3126567

Sequence Coding Region

3122176..3122361,3124224..3124307,3124453..3125240,3125510..3125867,3125902..3126567

Expression

GEO Profiles:Os02g0157100

Genome Context

<gbrowseImage1> name=NC_008395:3122176..3126567 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3122176..3126567 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctattctctgcctcgttcttgtgctgatgctttcctctgcatcttccaccagctgctgcacagagcgtgagaacaactgcctcctccagttcctagcagggctctcgcaggacggtggcctcgccgcgtcatggcggctgggcacagactgctgctcatgggaaggcatcacctgcagcagcatggtcagcaaggacgccatggtcacagacgtcttgttggcctccaagaggctggaaggcagcatatcacctgctcttggcagactgccaggtttgctgcgtctgaacctgtcgcacaactcactatccggcggattaccatcagaagtaatgtcatcaggcagcatcatcatccttgacgtcagcttcaacagcctcggcagaattctaccactgtcgccaccactaaccactggtctaaagttgcctctgcaggtgctcaacatctcgagcaacaagttttccacggagttgccgtcgttagacggaatggcgcatctcatcacgctcagtgctagcaacaatagatttagtgggcatataccaactaatttctgcaccaacttgccatccttagctgtgcttgaactcagttacaaccaattcagtgggagcattccccctggacttggaaattgctccaggctcagagtcctcaagacgaactcttcaatgctgagtacttcaatagagtgcctctcttttccaaacgacaatttacatggaacacttgaaggggaaaatgttatcaaactagggaagctggctactcttgacctcggagagaacaacttcagtggtaacattccagagtctataggccagctcaacagattggaagaactccttttgaacaacaacaaaatgtatgggggcataccatcaaccttaagcaactgcacaagtctgataaccatcaacctcaggagcaacaatttcagtggggagctcgtcaatgtcaatttctccaacctacccaatctaaaagctttagatcttttgtggaacaacttcagtggttctttcccaaattgcttgctccttatatatggaaaaatacctcgatggttatcaaaactctcgagtctggagatgctaatattaaatagaaatcaattaactggaccaatacctgactggatcagcagcctaaacttcctcttctatctagacatatcaaacaacaatctgacgggagaaattccaacagccttagtacagatgccaatgcttaggtcagagaagtctgcagtccaagtccaattgcaccctagagcatttcaactacccatatatagtcttacatcactacttcaataccgcaaggccaatgctttccccataatgctggatctaggcagcaataaattcactggtttgatccctccagagattggtcagttgaaagggctccttgaactcaatttgagcgctaacaaattatatggagatatcccccagtcgatctgcaacctcacaaatctgctaacactggatttatcaagcaacaaactatctggtacaatcccagcagcactgaaaaatctaaacttcctaaccagattcaacatttcttacaatgacctagaagggcctatcccaactgaaggccagcttagcacattcacagattgcttcattggtaatccaaagctatgtggtcctatgctcagtcaccgttgtagttcagcaaaagcagttcctgcgcctgcctctactctatccacaggtgaattcagtgacaaggttatctttggtatcacagtaggcctgttctttgcacttggtgtgctgttagatcagatggtgttcagcagaatgaacattccggatgatggtcactactcaaatccatcaaaattccgtgtaaatttgccactgctagaactaaaaagaaacaaaaagaaaacgggaatatcaattattgaaaaactatttaaggtcaactatgtcacatggaaggttgaatggcttggctatctgcagattgagaagaatatcttgcacgacattgatcttcaaactgtcattattgatttcgcttcaagaaatgcgagaagaaactcttttttataa</cdnaseq>

Protein Sequence

<aaseq>MSILCLVLVLMLSSASSTSCCTERENNCLLQFLAGLSQDGGLAA SWRLGTDCCSWEGITCSSMVSKDAMVTDVLLASKRLEGSISPALGRLPGLLRLNLSHN SLSGGLPSEVMSSGSIIILDVSFNSLGRILPLSPPLTTGLKLPLQVLNISSNKFSTEL PSLDGMAHLITLSASNNRFSGHIPTNFCTNLPSLAVLELSYNQFSGSIPPGLGNCSRL RVLKTNSSMLSTSIECLSFPNDNLHGTLEGENVIKLGKLATLDLGENNFSGNIPESIG QLNRLEELLLNNNKMYGGIPSTLSNCTSLITINLRSNNFSGELVNVNFSNLPNLKALD LLWNNFSGSFPNCLLLIYGKIPRWLSKLSSLEMLILNRNQLTGPIPDWISSLNFLFYL DISNNNLTGEIPTALVQMPMLRSEKSAVQVQLHPRAFQLPIYSLTSLLQYRKANAFPI MLDLGSNKFTGLIPPEIGQLKGLLELNLSANKLYGDIPQSICNLTNLLTLDLSSNKLS GTIPAALKNLNFLTRFNISYNDLEGPIPTEGQLSTFTDCFIGNPKLCGPMLSHRCSSA KAVPAPASTLSTGEFSDKVIFGITVGLFFALGVLLDQMVFSRMNIPDDGHYSNPSKFR VNLPLLELKRNKKKTGISIIEKLFKVNYVTWKVEWLGYLQIEKNILHDIDLQTVIIDF ASRNARRNSFL</aaseq>

Gene Sequence

<dnaseqindica>4207..4392#2261..2344#1328..2115#701..1058#1..666#atgtctattctctgcctcgttcttgtgctgatgctttcctctgcatcttccaccagctgctgcacagagcgtgagaacaactgcctcctccagttcctagcagggctctcgcaggacggtggcctcgccgcgtcatggcggctgggcacagactgctgctcatgggaaggcatcacctgcagcagcatggtcagcaaggacgccatggtcacagacgtcttgttggcctccaagaggctggaaggcagcatatcacctgctcttggcagactgccaggtttgctgcgtctgaacctgtcgcacaactcactatccggcggattaccatcagaagtaatgtcatcaggcagcatcatcatccttgacgtcagcttcaacagcctcggcagaattctaccactgtcgccaccactaaccactggtctaaagttgcctctgcaggtgctcaacatctcgagcaacaagttttccacggagttgccgtcgttagacggaatggcgcatctcatcacgctcagtgctagcaacaatagatttagtgggcatataccaactaatttctgcaccaacttgccatccttagctgtgcttgaactcagttacaaccaattcagtgggagcattccccctggacttggaaattgctccaggctcagagtcctcaaggttggccacaacaacctttgtgggactattccagacgaactcttcaatgctgagtacttcaatagagtgcctctcttttccaaacgacaatttacatggaacacttgaaggggaaaatgttatcaaactagggaagctggctactcttgacctcggagagaacaacttcagtggtaacattccagagtctataggccagctcaacagattggaagaactccttttgaacaacaacaaaatgtatgggggcataccatcaaccttaagcaactgcacaagtctgataaccatcaacctcaggagcaacaatttcagtggggagctcgtcaatgtcaatttctccaacctacccaatctaaaagctttagatcttttgtggaacaacttcagtggtaagattccagaaacaatatactcatgtagtaacctaactgccctgcggctatcttccaataagtttcaaggccagttatcaaagggactaggtaatctgaaatccctttccttcctgtcactcagttacaacaatcttacaaacataacaaatgcactacagatattaaggagctccagcagcctcaccacccttcttattggccgaaacttcatgaatgagagaatactggacgatgataacattgatggatttgacaatcttcaggttctttcccaaattgcttgctccttatatatggaaaaatacctcgatggttatcaaaactctcgagtctggagatgctaatattaaatagaaatcaattaactggaccaatacctgactggatcagcagcctaaacttcctcttctatctagacatatcaaacaacaatctgacgggagaaattccaacagccttagtacagatgccaatgcttaggtcagagaagtctgcagtccaagtccaattgcaccctagagcatttcaactacccatatatagtcttacatcactacttcaataccgcaaggccaatgctttccccataatgctggatctaggcagcaataaattcactggtttgatccctccagagattggtcagttgaaagggctccttgaactcaatttgagcgctaacaaattatatggagatatcccccagtcgatctgcaacctcacaaatctgctaacactggatttatcaagcaacaaactatctggtacaatcccagcagcactgaaaaatctaaacttcctaaccagattcaacatttcttacaatgacctagaagggcctatcccaactgaaggccagcttagcacattcacagattgcttcattggtaatccaaagctatgtggtcctatgctcagtcaccgttgtagttcagcaaaagcagttcctgcgcctgcctctactctatccacaggtgaattcagtgacaaggttatctttggtatcacagtaggcctgttctttgcacttggtgtgctgttagatcagatggtactttccaagctaagatttcttcaattctgagatgagcatgagctaattttggtcaaccgtccatgaaaaaccacatcttccaaactacatgaacagactacagagttcaagaacagcatccagttgtgacaactctttgcaggtgttcagcagaatgaacattccggatgatggtcactactcaaatccatcaaaattccgtgtaaatttgccactgctagaactagtatgtacactttgagaatcgtgcgcaagtagtatcaatcatcagcattcacaaatattcaggtacagtaaaagaagaagaaaaaaaatctctcttaacgttcagattcacgacagaaaaagagagtagtaaataagagagaaatgatggccgcactttgcgtacttgattcgggtagtgatggcgacgcagaagcatttcctcgagtccctacgcgccgccggcgagccgaaaagaggcggcgggtgcgccggcgaccgagaagcggcggcgccgtcgccgtggagactagacgagacggcgatgtggccaaggaatgtttgggttccgaagggttcaggcccacacactttcttggtctgccaggcccattaactttcttgggccacacaaaattttggtccaaaaactcatgggccgtacgtcagaatcctttcttgggccgcacctagacgagaaccccgttgaggttcaactagtatgggccgcacgtgagttgcactcccgttccggcccaataaccgtccctctgcgagtactgattttgggcctgtatgggggagcttcgctgctacaacttctcctagaatcagaaactccaccaaacagtttaatttttgtccagattctgagaagctgtagttctagaatccagaaaatgaactagaagccaaaagccgagaaacctagcttttccagattctaagctggctatcatctagttgcttctcagaatcttaagctttcccaaagagaccctttgcctgccatacacgcatggatcggccaaaacaatctttgttaggcaaaattgttcgttcgtgtcgtgcaaacgcaagctgcgggtgactgaaccattcaggccctctttgtttaggcttataagccaacttataagcataaaagtctaagcctaaacaaacaagcatctttttcagtttgacttttttaaagctataagccacactaacactattaagccaaaaactaggttagagaagcttttttggtttatgtgagatatatgtataactccatcactaaacttaggatattaaatccaccgacttacaaatcatataaaccaataaactgacttaaaagtctaagccagtaagtataaacctacacaaagtgtctgaatcagacgaccaatatcattctctccccactgtttgtgttcgacacttgatttcagggccggccctaggggtaggccggttgtgcggccgcctagagcccaggccggaggggggcccatcacttacccccctgcccccctatcccagcccagcaccacaggcggtaggcccaacagagtccagcgatcagcgcgcgtgcgcgagtgtggttgtgcgtcgcttcgatctgcccgcggctgcgactcgcgagaccggagaggcggagatcgaggccgagccgcgtcgcttcgtcgccctgaaatcccgaatcgccgccgatgccctagacagtccgcgtccgcgaccgtgaaagccaaaaaccaagccgagtgatcagacttcagagacggagaccgggagatggagtgcctgactgcctgtgcgccgttgcctgattgctcgcctcgccatcgctggcggccggcccagccaaccgctgtggtgcatggctgcctgtctgggtccgcctgagtgattcctcctgtgatcgacgtgatcgactgatcgtcaattcgtcatcaattgtttgcctctcctccccagcactaaggtaggtcattgaactatgcctttatcaattaatttcaattcatagttattgttgtatagatataatttgctttgcaatttccctatttcaggtgttataatgttacctaaaaacatttgtcgggtgctcagaaaagaaacaaaaagaaaacgggaatatcaattattgaaaaactatttaaggtcaactatgtcacatggaaggttgaatggcttggctatctgcagattgagaagaatatcttgcacgacattgatcttcaaactgtcattattgatttcgcttcaagaaatgcgagaagaaactcttttttataa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0157100, RefSeq:Os02g0157100