Difference between revisions of "Os10g0400100"

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(Created page with "{{JaponicaGene| GeneName = Os10g0400100| Description = Methionyl-tRNA synthetase, dimer-forming family protein| Version = NM_001071076.1 GI:115481895 GeneID:4348562| Lengt...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0400100|
 
GeneName = Os10g0400100|

Revision as of 21:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0400100

Description

Methionyl-tRNA synthetase, dimer-forming family protein

Version

NM_001071076.1 GI:115481895 GeneID:4348562

Length

3971 bp

Definition

Oryza sativa Japonica Group Os10g0400100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13850203..13854173

Sequence Coding Region

13850407..13850663,13851079..13851232,13851366..13851519,13851606..13851838,13851933..13852076
,13852221..13852311,13852503..13852607,13852717..13852833,13853018..13853136
,13853244..13853309,13853406..13853534,13853624..13853767,13853849..13853953

Expression

GEO Profiles:Os10g0400100

Genome Context

<gbrowseImage1> name=NC_008403:13850203..13854173 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13850203..13854173 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgaaggaggcggtggtgccggtggaggggcggaggaacgtgctggtgacgagcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctctccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgcggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctcccccagggagatctgcgacaagtaccatgccatccacaaggaagtgtacgagtggttcgacatcagcttcgacatcttcggtagaacatcgtcgccgcaacagaccgaggtctgccaagacatcttcctcaagctactggacaacaattggctgtcagagaacacaatgcagcagctttactgcaattcatgccaaaggttcttggctgacaggcttgtggagggctactgccccacagagggatgcaactatgactctgccaggggtgaccaatgcgagaagtgtggaaaattgctgaattcaactgagctggttaatcccaagtgcaaggtttgcgggagcacgccttgtgtccgcgacacggatcacttgttcttggagctccctctgctgagggagaaacttgagaagtatatcgacgagacttctttgactggatcatggagccaaaacgctattcatgcaacaaatgcttggttgaaggaagggttgaagcctcgctgcattaccagggatctgaaatggggtgtgcctgtcccacatgagaagtacaaagacaaggtgttctatgtctggtttgatgcaccaatcgggtacatctccattacggcgtgctacacgcctgagtgggagaaatggtggaagaatccagaaaatgttgaattgtatcagttcatgggtaaagacaatgtcccattccatacggtcatgttcccctccacactacttggaactggagaaaattggactctgatgaagacgattagtgtgacagagtatctcaattatgaatcaggaaagttctccaaaacaaagggcattggagtgtttgggaatgatgcaaaatccacaaatattcctcctgaagtgtggcgatactacttgcttaccaatcgtcccgaggcatcagatacattgttcacttggacagatttgcaagccaagtgtaacaacgagctgctgaacaatttagggaacttcatcaatcgagtactaagctttatcgcgaaaccagagggaactggatatggttctgttgtacctgattctcctgatgtggattcccatgctctgactcagtcattggctgagactgttggtaaattgattgatcagtacatcgatgcaatggacaaggtcaaaataaaacaagggctgaagattgcaatggccatttctagcgaaggaaatgcatacctacaagagagtcagttttggaagctttacaaacaagatccagccagttgcgcaactgtgatgaaaacctcagttggaattgtgtacctcctggcatgtttgctggagcctttcatgccaacattctcaaaagatgttctgcagcagctaaatctaagtccagaagagcacctatcattttgtgatgaaaaaggagaggttgagaaggccaaaagaccttgggatctcataccatcaggccacaggatagggaaacctgcacctttgttcaagggattggaaaacgaagcggtgaagggcttgagagaaaaatttgcaggcagccaagctgaaagaaaattgaggactcaagtcgccgcacaattggaagccacaagcatatag</cdnaseq>

Protein Sequence

<aaseq>MAAAKEAVVPVEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADA FARYCRLRGHNVLYVCGTDEYGTATETKAMEEGCSPREICDKYHAIHKEVYEWFDISF DIFGRTSSPQQTEVCQDIFLKLLDNNWLSENTMQQLYCNSCQRFLADRLVEGYCPTEG CNYDSARGDQCEKCGKLLNSTELVNPKCKVCGSTPCVRDTDHLFLELPLLREKLEKYI DETSLTGSWSQNAIHATNAWLKEGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPI GYISITACYTPEWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTI SVTEYLNYESGKFSKTKGIGVFGNDAKSTNIPPEVWRYYLLTNRPEASDTLFTWTDLQ AKCNNELLNNLGNFINRVLSFIAKPEGTGYGSVVPDSPDVDSHALTQSLAETVGKLID QYIDAMDKVKIKQGLKIAMAISSEGNAYLQESQFWKLYKQDPASCATVMKTSVGIVYL LACLLEPFMPTFSKDVLQQLNLSPEEHLSFCDEKGEVEKAKRPWDLIPSGHRIGKPAP LFKGLENEAVKGLREKFAGSQAERKLRTQVAAQLEATSI</aaseq>

Gene Sequence

<dnaseqindica>205..461#877..1030#1164..1317#1404..1636#1731..1874#2019..2109#2301..2405#2515..2631#2816..2934#3042..3107#3204..3332#3422..3565#3647..3751#acctctcgcaccaccaccgcgtcagtatacaaacggcggcgaccaaccaaattccggcgagtcgtcgtcgtcgtcgccgtcgtcgagagagagtcaaaccccccacacgcaaagagagcgaaaccccacccccctcctcttcctcatccaccccacgcacgcctcgtcgcggccgcgcgaggtgagctggagcgaacggcggcgatggcggcggcgaaggaggcggtggtgccggtggaggggcggaggaacgtgctggtgacgagcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctctccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgcggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctcccccagggagatctgcgacaagtcagcctctctctctctcctgcttgttcttgttgaggttttggttgctcttcttcttttcaagtgaaccactctgctccgattatttgatcgattgagcaaaattgtggcatggcatgaattttcccctaaattttgaggcgatttcatatcgaatattaggaacagacgagttgtgtaattttgtaatggggatccagttcgggttaggaacgaagggaattgtcagcttcagctgtcttatccttttggaagcaaattgtcaaattgcgcaactctcaattggtccaagtccccaacgaaacaaaaatcttcctgtcccactagttaatccttttttaaaaaaatttggattagcgcttactagtacagctttaacaactgagtcctctctcatgccatgtgcgtaatgaaggtaccatgccatccacaaggaagtgtacgagtggttcgacatcagcttcgacatcttcggtagaacatcgtcgccgcaacagaccgaggtctgccaagacatcttcctcaagctactggacaacaattggctgtcagagaacacaatgcagcaggtaaagttatagtgtcagtgcagggattattactttattggcatcttgtttcaatagaagttttaatttccattgtttcttctgtgatgtttttttgctaacaaatggtgatggctgtgcttacctgctgcagctttactgcaattcatgccaaaggttcttggctgacaggcttgtggagggctactgccccacagagggatgcaactatgactctgccaggggtgaccaatgcgagaagtgtggaaaattgctgaattcaactgagctggttaatcccaagtgcaaggcatgtcatgtctgttaaccttttttcactgctactacccacaatgcatttctttgatgtgctgtgaatttctgaactttcttcaggtttgcgggagcacgccttgtgtccgcgacacggatcacttgttcttggagctccctctgctgagggagaaacttgagaagtatatcgacgagacttctttgactggatcatggagccaaaacgctattcatgcaacaaatgcttggttgaaggaagggttgaagcctcgctgcattaccagggatctgaaatggggtgtgcctgtcccacatgagaagtacaaagacaaggtttgtcatcatttgtttgtgttggtgaatacgaaaaattctaaactgtatattgttcaagatcgtgtcagtgatacttgtgaattggtttcaggtgttctatgtctggtttgatgcaccaatcgggtacatctccattacggcgtgctacacgcctgagtgggagaaatggtggaagaatccagaaaatgttgaattgtatcagttcatgggtaaagacaatgtcccattccatacggtaagagtacatattcttttggcaacttgagcttccaaagtgtcattcagtttttattagattctgtatgtccaaatacacgggcttcatcaggccttctcttttcatggagatcatatttcatgcatgtaacaaaatatttaggtcatgttcccctccacactacttggaactggagaaaattggactctgatgaagacgattagtgtgacagagtatctcaattatgaatcaggtaagacgactgtttttgtggtttacattccaaataggttgtttcttaccttttcagattgggtgccttgaatactaaattactacgtatgtattttcagtgagcctatgtggacgtcttctttatgttaggattcttttttttcatgaacaggaatttgagtactaaattatgttttttttcatgaacaggaaagttctccaaaacaaagggcattggagtgtttgggaatgatgcaaaatccacaaatattcctcctgaagtgtggcgatactacttgcttaccaatcgtcccgaggctagtttttcagaaaaaaaaaatcataatatttcggttatgcctttatgtaggcatctacataactacaataagaaatttgttttgaactgttttctgttaattccaggcatcagatacattgttcacttggacagatttgcaagccaagtgtaacaacgagctgctgaacaatttagggaacttcatcaatcgagtactaagctttatcgcgaaaccagagggttagtaaaacgaggaaaatcttagttctgaacatgatacctctgttttagtgctctgtttccttaagatttctctagtagcatccgcattcacttgtccattttattctgattagctcctgcatgatctgtctaacaagatgttaagaaataagaagttaagatagttcaactgctgttgcaggaactggatatggttctgttgtacctgattctcctgatgtggattcccatgctctgactcagtcattggctgagactgttggtaaattgattgatcagtacatcgatgcaatggacaaggtaatgcattgattttaagttgtattaactgtactactcaataaatctgaatttgaattgcctctacggatctgaagaatcgtgctaacaaccatttccattaacaggtcaaaataaaacaagggctgaagattgcaatggccatttctagcgaaggaaatgcatacctacaagtaagtctttattcttcttttcttcccttatgctcctaattgtacactaaatatactttcgagtggaactgtctaaaattttccattaatatgcaggagagtcagttttggaagctttacaaacaagatccagccagttgcgcaactgtgatgaaaacctcagttggaattgtgtacctcctggcatgtttgctggagcctttcatgccaacattctcaaaagatgtatgtctcttgcttcgccgtacaagttactcgcatatttgcacatatctttaatgagaatctaatatgttcgttgttctctcacgcaggttctgcagcagctaaatctaagtccagaagagcacctatcattttgtgatgaaaaaggagaggttgagaaggccaaaagaccttgggatctcataccatcaggccacaggatagggaaacctgcacctttgttcaagggattggtgagcttatatgcatatttggggaccatctttatctgttttactaaccttcctttgcttcatgcctcccactatgtgcaggaaaacgaagcggtgaagggcttgagagaaaaatttgcaggcagccaagctgaaagaaaattgaggactcaagtcgccgcacaattggaagccacaagcatatagaaaatctaacactatttcccttcaactactagatgttaaaaccgggcttaacaaaaggagcgtttgttttctttattttgccttgaataataattgtacagtgtagtgacttgagattaatgataatacatattacttgtaattccaaaactcaaatgctcaattgattttagtttattgttgattaattattgaggcttgcacatatgccactgttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0400100, RefSeq:Os10g0400100