Difference between revisions of "Os02g0313500"

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(Created page with "{{JaponicaGene| GeneName = Os02g0313500| Description = CHCH domain containing protein| Version = NM_001053192.1 GI:115445754 GeneID:4329136| Length = 8323 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0313500|
 
GeneName = Os02g0313500|

Revision as of 19:13, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0313500

Description

CHCH domain containing protein

Version

NM_001053192.1 GI:115445754 GeneID:4329136

Length

8323 bp

Definition

Oryza sativa Japonica Group Os02g0313500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12411692..12420014

Sequence Coding Region

12412160..12412169,12412359..12412447,12412524..12412621,12412988..12413111

Expression

GEO Profiles:Os02g0313500

Genome Context

<gbrowseImage1> name=NC_008395:12411692..12420014 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12411692..12420014 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtgcaggcggtgcgtttggtggaaatcggggcgtgaggcctgtgcctcccgaaaagggagtgttcccactggatcacttgcacgagtgtgacttggagaagaaagattatcttgcgtgccttaaatcaactggatttcagtccgaaaaatgtcggcagttctcgaagaagtacctggaatgtaggatggagagaaacctgatggcaaagcaagatatgtcagagcttgggtttagaagtgaggatgtcatgaacccatcacccaacaaaaaaaacaatctggaaagttctgcaagtggtccaaacgaggaaagatag</cdnaseq>

Protein Sequence

<aaseq>MSAGGAFGGNRGVRPVPPEKGVFPLDHLHECDLEKKDYLACLKS TGFQSEKCRQFSKKYLECRMERNLMAKQDMSELGFRSEDVMNPSPNKKNNLESSASGP NEER</aaseq>

Gene Sequence

<dnaseqindica>469..478#668..756#833..930#1297..1420#gcaagtgcagttttaaagaaaaaaaaagagataaaaggtgagtacttgagagtatcttccccttccctgcgcgtaaaagaaaatctcccgtctcgtctcctccgctacttgcgccatcctcggctgaacaggggagaggcgccgatctccatctggcgagcagagcagggcaggggaggggatcctggtgagcatccacattctatttctgattcatctctctctctctctcccaccgggagtacttctgtctggaatttgctttgcgttaaccctagcttctcttctagatctggaagaagctcttctcttaatttcagagccttaaccttaatacaagtaacagtttgcttgttccccacaaaagtttagggtttcaactgaatccgcatttccccccttggttgctactcatctgggaagttctggtggggcggtttgagcactgagaaagtatcaccattggaaatgagtgcaggtgtgctgatcctgaatttgtcctctattaatattttttttctacattgatttgctctggatgtatgtcacaaccgtgaagaacttatgggttccattaatccattcgtgtactgactgtttcctgcttaatctcccaagttaagtgatgctaatgtgaagttcggaataactttgtgggctctcgcaggcggtgcgtttggtggaaatcggggcgtgaggcctgtgcctcccgaaaagggagtgttcccactggatcacttgcacgagtgtgacttggtaagtttgcacaccttttttgccccgatttttttggtgtcataacttgtcatgtgacaactgcacgttcaaacaggagaagaaagattatcttgcgtgccttaaatcaactggatttcagtccgaaaaatgtcggcagttctcgaagaagtacctggaatgtaggatggagaggtgatactttgacatattaatttcagatccatgacttactcttaccatacaatggttagctcaatctgttttccatgtcttgaaggtttctctttatttcgaggcaaaaggtcttgtgggggatattttgatgcttgtagtagccaactttaagagaaatcaaacagttctattaatacctgaaattcttgctgtgttaagagtgcttaagaacttcgatattccaacctacctattcaggctcacaagtcgaaacattgaagagtttgtttttcagttgtaggtttaatgctgctgtttccattataaattcaagacatgctattcttgtgtattatatctttgtgaaaaatatctttgttccagaaacctgatggcaaagcaagatatgtcagagcttgggtttagaagtgaggatgtcatgaacccatcacccaacaaaaaaaacaatctggaaagttctgcaagtggtccaaacgaggaaagatagctgtttgattttgaggtagctttggttctaatgcaaggccatcatccaggaaaccagtcaagtctaattataaagaagagaataaatagcaagaagatgaagggaacaaacactatgaaatgttgaaatttcctcttcaattgttaggattgttagaaccatgtgacacatgcttgcaagtaatttcttgtgaatgttcatcgtgaactcataaaactgtttgtttccatttctagtaaggcagcagtaaccaccagttttgtttttagattatagctgcatcactttcggaagagcaacttgatagaaaatcgctgatatctatactcatttaaaaggactccaatggtggtggcggtgtatctgccaccccacctatttccattgtagttttacatattaccccttgaacttcttaagatcacataacatctaaatctaaatggttagctacatataaaattaaacggaagtgagtattctctataaaaaaggtggcaatatacttcatgaaagatatgcttttatttattttggaaatattatgatatattttcttttagcgtagcaaagcacgaacatttagctagtacctacaaaagttctgccagtttgttccaaattttgttcttaagaactaagaagcagatactataatctgcgtgcatttggtggacgtatgaaggcgttacttcactatcaaatttaccttttgaaatcctttcagtttattagccggatcacgaacttgccctgttcatgctaggtccttaaactccaatatttattaattgaatctccaaatttgataaattgctcttcttgagctatcacattgtttgggctaatatgatctccaaagaaaagtaggtgggtttattagtgcagtactccctctgtcccaaaatataaggaattttggagggatgtgacatattctagtactatgaatctaaacaggctccctgtccagattcgtagtactaggatatatcatatccctccaaaatcccttatattatgggacggagggagtatgagtcaaaagtcagccaaaacatggaattatgccgtgttgcttgtcctcagatcatcgtcccatcccagccttgttttaaaacctttcaaaaatagcattccgtgttccttgatcctgtacctcgactcataagtgaggaactttggtgacatgctcaaatctaaaaaatgtgcttgccttttgtgtcatgagtcaaattattagcggtagtttttgtttggtattgctgttggtactcaatgatcaacgaccattttagttgagccatcatgaatgtatacttttgttgtagtgatcaccaagctataccttagaaaattccttatgttcccctgagtctttgctccatcctttccatgccattgagctttgtcttgtcttgcatgccctagattttttctaatcccctctatacacattgggtgagttgcttcataaaaagcatcattctcaaggtgaaaattgtttcagttctaaaaaaatagaaggggatataattatatgaccccaaatttgaaatataaaaattataatttgaaatgagtttcaatcaaatttgatgatttttttggagagtagattcacttatctccatggaaattttttccaatttggttgaagttgattaaaaagatactccctctgtcccaaaatatagcaatctagtactggatcgaacataaacttgtactacaaatatggacaaacctcctgtcctgtccagatttatagtactattaggttgtgtattcgatactaggttgctatattttgggacggagggagtatttgttttggtgtcgaagaagaggagaaatagaaaaatggtggtttgtgtaatttatgtattgaaatttcatcaaattttgtttcaatacatttgaaaatttcgaaattgaatttcaaattttgggtcaaacaattttgtgtcattcattttttttataaaggttttaacctcaatatttatatgaagctagatatgtttgagcgaggtgcaatatagatattttgtaaaaatcgaatagtaacaaaatgagttgaggtgattagtacgtaaactcggtggtatctaggaataaagaaagaatcaggagcatgtatagaaggatggagtgaagacttaggcacacaaggaattttcttatacattttgcaagagcagcattatgtttggctcatgtctcatattatagctatggtgaccgctcactgcaaaacaagacaagttattcttttcttggattgtatatttaaaagcattgccttgcccaaaaagatccaaaatcataatgtccattaggttggttgtttgtcatttctattaaataaaatatagatacatccaatttattcaaatgcaatgtatcatgtggatatatatgaagtcgaaagatgcaacaaactctcttgcacatgttcgttattcatagagaatattgttgaatcaccccttgcttttttctgaaaacaatgtagtctattcatctttgtcttgggaagtattaaaaagttaataacaatatattttttttgtctatcacttcttcttttgcaaagagaagtacaactgattggttttttataagctattctagttaacatcacgtagtgtttggaatgttttaagaccttaccaaccaaaagtatccacaaataaaaataacatgtactccctccgtcccataatataagggatttcgggatggggcgcacactggtgcgtgtgtgtttttccacatgaaccactagtttctgggttcttccccttgcttccgaaaccgtcacaccaaacaccattattttatatggaacacattaaattccttcctagaaaagggaacccaaaactgaataaatacgccaacggagctagccatggggagcataagtttcatttgccatgtgagtgcccgtgagtttttccctttctacaattcatcttccatagaaactgtggtggatggatctcaagaggagagatgaaggagctgaagaaagctttgtcaaaccactgcaacttaaggtgaaggattaccctttacttggagtccatatctcggaatgccagatctatgacctagagaaccacatgatctgttaccaggtgagcaatctctttagcttctatggttcactatggatctgtttggtggtttttattccattcaatattttccctactgctatacctcagaaaagaagagatttcacaatgattagctctcagcacaagaggaggccatgtgaaaataaatactgtcgtgagtacctggtgaacatgtacgcaatttatcccctttttttattggtgtaatttctcttatgtctttttggtaattatctgtgtgtttcagcaacataagaatctctgagcatcttgctctgctctccatttgttttttatctgttcagatgcaaccagagtgcagaaggggtggcgcagaaggtctggaacttctccaaatgcaggggcatgtgtagttaccgtttatacaggtaagccatgtgaagaacatgcatgccatggtagattataattttaaggttagatacttagatttgatccttttaatttggtagaaagaagaattgggagatgctggcagagatactggatcatgctgtcaatacgttgggttacacttccgtccataaattgttgaacaagggttcatatgtggtggctgttgcagagatgttgacatcaacccctctagaggtgaagtccaaatgatattttcttcacaagtaacacaaccttctggattgtatatttatttttttagaacacgcaggagatctgtgtatcatttcattaagatagagggaaaatgattgcatatttaaaggcattgccaagtccaaagaaacaaatcataatatctagttggtggattatttgtcacttctactaaattaattatagatacatccaatttgttaaaagcagtgtatcctgtagatatatatttgtagtcaaaagatgcaacaagctctctttcgcatgttgtttattcataaagcccatagcatcgttgcaaacttgcattgccgcttgctttttttatcatatatagtctattaatctttctcttgggaagtatcaaaggtgtaaacttaaaattttacttattttattgtttgccccaaagaagaaatagaaccaattaatttataagctatgctaggcatgaaaacattacattgtgtagttcttttcgaaaaggagcatcatcttcttttagaatgatttaagacctgaccaattaaggagatacaaaaatagaaatcacatgtagattggttgctgtcacatttaatgatagaaataagttagataaatccagttcttttgaaagcacttcaatcctatagatacaatagaaataatatagaagattgcctggtcgcagtactcacacttctaagcgtgttagatgatggttgaaccacttcaccgtaaaatatatagccatggctctaggcctttccacactccaaaactgaaaagagatagtttaggagggatttactagttacaaattttaggagggatttaaatcatttacatctgttacaagcagcttaccatttatgcttccagatttgcacattaaatgtatttgacaaaaaagatttgtacattaaatgccttcccttttcacacctatgaaattaaatatatacacattcttggaacaagttgtgaacaaattcatttgactttacatcacagatctgggatctctgttttgcccaagcactttcttccatggaaattgtgatggctggcaaggcttgccaccaggtaaatgacctaagttgtctttccttttgctattctattgttgtttgggtcacatggtgtatgtcttaacgtttgatttctccgtttgatccacagtgccgtcaaatgaaacgaaactttgcagtggcatgcacgcaggttaagaagggggtatgcccaataaaatactgccataggtgccttcttaagaggtaagaattttcttccctctattttcttggcaggtgagattttccttcatagttgaagacactcaccatctccacagtggaggaaactgattttctaagaatatatcaatctacttggctttggtttgtgactaattcttttaggtatgatgagaatgatgaagaagtgggacagatggaagcctggatctgcccaaaatgtagaggcatctgcaactgcagctgctgcaggtaagccatcagaagctgatatggaatggtaatcaatagctgcagcagcttactttgtttggcatggcagaaggaagaaaggacaacaacccacagggagattggtccacactgccaagaaaggagaacaaggggctgccgatgaggtattatatttgtttttatttggcaatacatattatatttaactgtttgtcaattctttgttgtatgctgctggttcattatggttaacaattgtaatgaacaagcaggaaagcacaggtagatcccttcggatagagaattctgttgaagaattgctggtcgagggggatcaaataaagctgaagggcaacattgtggtgaataaaaattttgatggtgaaagctccttggctaaagacaaaaatggatctatattgggctataatagcgcagtttcttcacccaataaaaaagtgcttccaaggggtagtctggtcactaacattctaggtgcagatctggaggtgaaagatgttggaccagcaattcagttatacgagttctgcaattcatttggcgaggtaattgaaccaacaaccttattaatagcatggcgacacatgtcttattatgacaacatcttgctagcatacacagacagttgaattaatgtaatgtttcttagtaaaagaaatctatgtgactccaactagacacatttttgcttctcacctaatagataatatcatggactccatatttttcacttcactatcctagttatataaaaatacaatacatcttaaagaatcggatttcttatttgtcctaactctttctttgtatgcgcaaatatccaacaattccatgtatactaattcgaaccggttggctcaagccgaaattctgttcattgaattaatggctgtctgtcaccaattgatttgcagttaccaaagttatctccatagaaagttttcttgtttctattatataatactgtaagctcctttatcttctataaattatattttgtattctaaatggaatgacatataggatgattttgatgcagattttccagataaggaagggccaacctgaacaaattctacaagacatagcaagagatcaagaggttgaaatagtacccgagcttattgctggctttcacaaaaacttgctatcggtcatcaaagaagacagaggggagaagtaaataccatccgaatcaaaatttccttcattttgttcaaatttttggtagtaaatcgataaaaatgggttattttgtttccaggaattcaatctacataacaaatggagatgcatggttaaatgatttaggtgcatatatcaatgaattggcatttatgtcaaaggaattgcatcttgaatttgtaaacaagggaacattgggatacaacaagctgagtccttgtaagctgcatgtacttaatttactttgcgatgaggccctctctaccgtgtaagtgcttctttaccacatttactggaatgattcaatttattatagtttatattgaattgttaactgtgtcttaacctttgaacagaaagttaagaaaattgattgaagaacaaaatggaagggcagctgaaagaaggaacgatgccaaagcaaaactgcgggctgcaaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0313500, RefSeq:Os02g0313500