Difference between revisions of "Os02g0531200"

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(Created page with "{{JaponicaGene| GeneName = Os02g0531200| Description = Bile acid:sodium symporter family protein| Version = NM_001053558.1 GI:115446486 GeneID:4329548| Length = 6328 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0531200|
 
GeneName = Os02g0531200|

Revision as of 19:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0531200

Description

Bile acid:sodium symporter family protein

Version

NM_001053558.1 GI:115446486 GeneID:4329548

Length

6328 bp

Definition

Oryza sativa Japonica Group Os02g0531200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20407599..20413926

Sequence Coding Region

20407650..20407847,20407951..20408050,20408483..20408590,20408661..20408728,20409034..20409112
,20409242..20409300,20409406..20409474,20410045..20410158,20410808..20410829
,20410923..20410990,20412098..20412183,20412688..20412817,20413500..20413601
,20413679..20413747

Expression

GEO Profiles:Os02g0531200

Genome Context

<gbrowseImage1> name=NC_008395:20407599..20413926 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20407599..20413926 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtaaccacccaccacctctgcctcctccggtcgaccgtcctctccgttcccgtccgcctccgtgcaccccgggctccccctcacccccgcctgcccaccgcctccgcctccgcctcctcctatcatgggccaacgcacctccgccgcctgcggccactgcgcgccgccgccgccgccgccggaggagcctcgccggatggcgctgatggggccaagcgccccgcgcccgcggcggcgtcttcctcgctgggagccgcgctggtcggcttcgcgcgtagcaacttcctcccgctagctctaattgctgggattgctctggccctcatggatcctacactcggatgccttgctcacaaatattcactgtcaaagtacagcaccttcgggatattccttatctcaggactgactctgcgaaccaaggaacttggtgcagcactagaagcttggcctgcagggctttttggacttgcctcaatcttgctgtttacaccctttttggctcagtttattatgcaaattaagttcttccctcatgaatttatcactgggttggctatgttttgttgcatgccaacaacattatcaagtggagtcaccttaactcagcttgttggtggtaacactgctcttgctctcgcaatgacggctatatcaaacttactgggcattatgattgtacctctttctcttgcaaagtacattggtgttggagctggggtgtctttgcccacagagaaactatttaaaagtctggttacaacccttcttatccccattattttaggaaaggttgctcgagaaacatcaaaaggtattgctggctttgttgatggaaataagcagggcttttcagttacaagtgctattcttctcagcttagtcccatggatacaagtaagcagatcaagatcactgctcttatctgttcaaccaaaagcctttgctgttgctgtcactgttggagtgcttttgcactttgctctgttggctttcaatgctgcagcattgcatatcttgtcacgtcttgaacaaagaggagtgtctgtctttgcaaggaatgagtatgctcgagctgtcattttagtggccagtcagaaaacattgccagtgctggttgccgtggttgagcagcttggaggtgctctcggagaatcagggttgctggtaatcccatgtgttgctgcacatattaaccagattattatcgactctatcatagtaaattggtggcgccaaagagatcaacaatttgctaatgcaaaataa</cdnaseq>

Protein Sequence

<aaseq>MVTTHHLCLLRSTVLSVPVRLRAPRAPPHPRLPTASASASSYHG PTHLRRLRPLRAAAAAAGGASPDGADGAKRPAPAAASSSLGAALVGFARSNFLPLALI AGIALALMDPTLGCLAHKYSLSKYSTFGIFLISGLTLRTKELGAALEAWPAGLFGLAS ILLFTPFLAQFIMQIKFFPHEFITGLAMFCCMPTTLSSGVTLTQLVGGNTALALAMTA ISNLLGIMIVPLSLAKYIGVGAGVSLPTEKLFKSLVTTLLIPIILGKVARETSKGIAG FVDGNKQGFSVTSAILLSLVPWIQVSRSRSLLLSVQPKAFAVAVTVGVLLHFALLAFN AAALHILSRLEQRGVSVFARNEYARAVILVASQKTLPVLVAVVEQLGGALGESGLLVI PCVAAHINQIIIDSIIVNWWRQRDQQFANAK</aaseq>

Gene Sequence

<dnaseqindica>52..249#353..452#885..992#1063..1130#1436..1514#1644..1702#1808..1876#2447..2560#3210..3231#3325..3392#4500..4585#5090..5219#5902..6003#6081..6149#acacacacgccagtcgccgccggcttttgcttcctccgcctccgcctcgcgatggtaaccacccaccacctctgcctcctccggtcgaccgtcctctccgttcccgtccgcctccgtgcaccccgggctccccctcacccccgcctgcccaccgcctccgcctccgcctcctcctatcatgggccaacgcacctccgccgcctgcggccactgcgcgccgccgccgccgccgccggaggagcctcgccggtaacgccctcccccccgaaccgaggaacacccctcctcgcccccgtaaacttcgttcccttccagctgctgaccgagagtggcccccctctcgctcctccaggatggcgctgatggggccaagcgccccgcgcccgcggcggcgtcttcctcgctgggagccgcgctggtcggcttcgcgcgtagcaacttcctcccgctaggtgagttttctgcttctacgcgatctcagctagctcgtgcattgctgctgctgttgggtggacttgtgtgtgggacgcagtgtgccttacaggtagatgtagagttgcgaaatttcacggcctaacatggaacaattgaaattccaattctcataaattgtaatgcaataggagtattacctccagctagtttacttgttaatgaccctgatatttcattagacaagagaaatgctagggtagacgggtccagttaccaaattcaacaagtttctgtgaacccaattatgcactagttagttcctctgcacgtgctttttagttgctctatgttgcaaacttgcaatggagatgataccgtagatgtgtctgtgcatccctcagacaagctcaagtacatattttcttagcttgtgtgtttcttatgttaagctctaattgctgggattgctctggccctcatggatcctacactcggatgccttgctcacaaatattcactgtcaaagtacagcaccttcgggatattccttatctcaggttagtgttttaacccaattcatatatttgtggtgctatgacctcacactaatgacgtcctcttgcataggactgactctgcgaaccaaggaacttggtgcagcactagaagcttggcctgcagggctttttggacttgtatgatccagtttttgttccattacaattgtacctgtatgatctagtactattctgatctgtaaatgtatctatgctgagaatagttcttgcttgctgcattgtgatccagccatccaggatagggttgcatatcacattcatgctactgattattcaatttactttctagcatttaattatttagctgaggtcacatgctgcctgtctgatttttgttagagattcaagttcttatgttgttatcgagtgcctaaatatgtttgcttaaatatttattggtacatattttcattcttttgcaggcctcaatcttgctgtttacaccctttttggctcagtttattatgcaaattaagttcttccctcatgaatttatcactggtatgttggctctcattgtgttccccatttccctgttcctattatattatttattgttgcaatgtagtaactcatgccttcatgttatttatagcttgtttgctttgatattgacaacacatctcacagggttggctatgttttgttgcatgccaacaacattatcaagtggagtcaccttaactcaggtactaacttttcctagatttctattcactaatagcttataatgtgcatattttctcatatagccaggcattcaaatttaatcaagttctatcactgctatgcagcttgttggtggtaacactgctcttgctctcgcaatgacggctatatcaaacttactgggcattatgattgtaagcaaagctttgttgctagtttgtcttctgaaccacttaccagcattacttataactaacaacttataaacacattatcgaactaccgacttaattttgttgattcattgcaacacaatgttttgtttgatgccattaaaagtaatatatattttttagtattgaaaataacattagagaagcaagttatttttctcctgagctgaactgattatgggaggaaaatattattttagataaaaatagaaattatcttgatcagagatggttacttgattgcaatccatcatccctgtagaaccttgaagatatctataacattgcctgggccgtaggctaaaatccagcattgactatgaaacaaattatctttgagacttccaagtagcattgaacctcctaattctggcattaatcttcgtatgtattttcagataatgagcattgagcaatcaacttattgtttttagataataatcaaggatgactttttccctgttttccaaaagccaaaactcctatttctttgtaaaatatgttcatatttatttgtgaccatggaattaggtacctctttctcttgcaaagtacattggtgttggagctggggtgtctttgcccacagagaaactatttaaaagtctggttacaacccttcttatccccattattttaggaaaggtatgttgcttttcttatcttgcaaaagatagctaatatgaatgcataattatgtgcctgtcttctttctggattttatagttttctgatgaaataatacctggacttgttctgcaccatatctatgcaactaccttacattataagcaggttttttgatgaacattcaattgtttaggcccaatgtgttctagatctactgtcagcccttgtttggtaggctgcgattctgctcccttccctggcctatccacgtggatgggctgggattgaggtctgtctgaataaggttttggcaggattacattattagccaccacctgtttgagtagaatttacagtagagcttcctaaaaagacacaatagagttccttgttcatttatttcatgacagtaaatagcaggaaagctcataggttttaactgaaccgctctctgtttgaatgcattgtcattagtttccatccaactctgaatattgagtgtactccctatcaatgtccatccatagagagttgcagttctaactctttgttaattacttcattctcattattatgcttcagacctatgcattttttttttactgtccaagtttgaaatgatggaagcttactgaaggcacttatgatgtcttttgtttgtcaggttgctcgagaaacatcaaaaggtatgcaatctactttctttcggaagaaagttttgactgtagattaccagtttgttgaattttagttcttattattgatttatttccatgtaggtattgctggctttgttgatggaaataagcagggcttttcagttacaagtgctattcttctcagcttagtatgtctctaacatagaaaaatatttcgtttaatacatttcttgcatgcatttgttgaatttaaaaaatattaggttataataaaggtgatgcttacttggaccaagagagaaaaaaaaggttcaatatggtttcctgtttcaagcatgtgttggataagtttatgtatgaactctcgactaattgaaagagggtggacagtggacaagctagggagttattagtattgtagctgctttggcatcaaattttcaaatgtctattactttggagaaagagaaatgtacacatgtcatgaatactataaattattttcatgggttatctccaaaaattttgctcacccagattatgtataaatgatttgaaatatgaaacagggctcatggacaaaggaaatttctttgtatttgtagcaatttgaaaagagggaacatatagtaagttcaaggtagtgagaaatagcaatgaatatgcaacctgaaaaaaaatccactaaatcaggacacgtcaattgatgaaaataatccactaaatcaagacatgtcaattgatgaactgaaaaaaaaaatctcaaataagatgttatctacaattctaatgaactggtagatgctctttagtacggtttggaaaggactgtatcttattttgaacttgataggcaatacttttcaaagagcgagaggaccctaacagacaacatttcaactagagcagaactgagcggttttgggcatgatctgttagcatgctttttcgttgttcctcctaagcttacattgcctttttagttaggtggtgttcttttctgattaagatacagattttacctcgatttctgttagcacgcttttcaaacggctaaagagtgtgtttcatgcgaaaactttctatatagaagttgctttaaaatatcatataaatccatttttcaagtttgtaataattaaatcgtaattaatcatgagctaatggctttcttgttttgcgtgccctaacttcatcttcattagaaaagaacaccaccttagtgacgaatcaatttcaattttatgcatgcacaatgtttgtaggacgcattttgaaatgccttcgtttcgcaggtcccatggatacaagtaagcagatcaagatcactgctcttatctgttcaaccaaaagcctttgctgttgctgtcactgttggagtgtacgtttatttcgtaatcttgtcatagcaaatcttgatatactgatatggaatttaaaaacaaaataatattttaatgtgattttgttttgctgtttactgtatgaacttgtatccttgacatcatgttttcatgatagcatattttgtattattattacttgtgtcctcaaaggcatgcatggaaaagttattctaatttgtagaattttgacataaaagtcatatactcatatgttggtgttatcacttatcattgttaggtaaaaagtgtgacgctattacatttattttcttgctaacagtgttagtttgggtttagcacgagataatttctgtcgtgctaaactgctaagcatggctaagacttaggcttgattagaagataggatccagacactcttaagtagactaaattttttgctaccagtgctatatttttttcttccttgaatatacttctgctgtgtatattatttgacagaagcatatttcctgtaataggcttttgcactttgctctgttggctttcaatgctgcagcattgcatatcttgtcacgtcttgaacaaagaggagtgtctgtctttgcaaggaatgagtatgctcgagctgtcattttagtggccagtcaggtcagtctttattttgattagcagaaaattatatttttgatatgttgcctcttgctgggggttaggatttaggaaactaccattgctggctagagcattggtatcccaggtacttaaggaaatgcaattttaaattcttttatgttggctttcttggctgatgagtgcacacatatgattatcctaagtttcacattcttttgtcgagtgaatatacaaggtaaaaagacaacttacaaggtaggtgtatcttggccatagaaccgataactgctcactttagtcaccaatattgtttaagcacattcaaggtcaaatcatactgtcgcaatggaatgcacacacatggcgctgattggggatgccatgttggactgttatgaaccttattttgcaagataacatctacatgctagtgtcttttaaaattttctcaaatatgcatgtacattggttgcttattttgctaatgtggatgcataatcagtgtcatgtggtcattttgacatgatatgcatcacctaaaacaagattagttatgcagattagtctatgagctacatgcagtctcctcataagtcgttttcgtgtgttgctattacattcttttttcatgacactgatattgttatatatgttttaggcccttgagttaactgacttctttcttgatgctctgtagaaaacattgccagtgctggttgccgtggttgagcagcttggaggtgctctcggagaatcagggttgctggtaatcccatgtgttgctgcacatattaaccaggtacttgttgctgatgtagttttgatgtctctctatttctatcaggaaatgcttttgatggataaatccttttgcagattattatcgactctatcatagtaaattggtggcgccaaagagatcaacaatttgctaatgcaaaataaattcaaaatgggtaaaacaaaaaaaataagtagcaagtaacatagaatcgtttggcaacgatgccctttgagtttaccgcatattagttttttatgattccgtaggaaacaacaatgaaactatttttgtgtagaaagttcattgagttgcttccatggagcactttctgttatgcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0531200, RefSeq:Os02g0531200