Difference between revisions of "Os02g0557300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0557300| Description = Similar to RING-H2 finger protein ATL1G| Version = NM_001053673.1 GI:115446716 GeneID:4329673| Length = 3354 bp| De...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0557300|
 
GeneName = Os02g0557300|

Revision as of 19:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0557300

Description

Similar to RING-H2 finger protein ATL1G

Version

NM_001053673.1 GI:115446716 GeneID:4329673

Length

3354 bp

Definition

Oryza sativa Japonica Group Os02g0557300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21962563..21965916

Sequence Coding Region

21962712..21963120,21964550..21964632,21964739..21964948

Expression

GEO Profiles:Os02g0557300

Genome Context

<gbrowseImage1> name=NC_008395:21962563..21965916 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21962563..21965916 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttgtacctccccagacccgcccgattactgctcggccgcatcgcctgagcttaagctataccaagccttcatcttctccgtgccggttttcttcacgttcgtcttgcttctcttcttctacttgttctacttgcgacggcgcagagcaaactggcagtccttgcgcatgaggactaataacttgatacggggagataaccccagattggagtgcggcataaagaaggagatgcgggaaatgttgcctgttgtggtcttcaaggagagcttcttgatcagggaaacacaatgctctgtctgcttagcagactatcaaccggatgagcggctccagagaatacctccttgtggccataccttccacatcgattgcatcgaccactggctctcgacaaacaccacttgccctctttgtcgagtatccctccttccatcccccaaaaccgccagcattgatccagtggatttggaagcacagaccgttgaagagaacagctctttggatgtacagtatcaggagggccgcattgacgagaacacgcgacaggaggatcagacattgcaacaaggtagtgagggtccaacgcatcaagctgaagaaaacgaagagacatcagtcagagtaaccactgagccccaagtagaggccgaggggtctccaagcacaacctgccggccttgtaaaacgaagaaataa</cdnaseq>

Protein Sequence

<aaseq>MSCTSPDPPDYCSAASPELKLYQAFIFSVPVFFTFVLLLFFYLF YLRRRRANWQSLRMRTNNLIRGDNPRLECGIKKEMREMLPVVVFKESFLIRETQCSVC LADYQPDERLQRIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEA QTVEENSSLDVQYQEGRIDENTRQEDQTLQQGSEGPTHQAEENEETSVRVTTEPQVEA EGSPSTTCRPCKTKK</aaseq>

Gene Sequence

<dnaseqindica>2797..3205#1285..1367#969..1178#gcgtgtgaaagccgcttctttttttcccatcatttgctgctgctgctgcacactcctcggcgcgagcccaactccgtccctaccgcccgccccgatccggccgccgccgccgcgcattcccaaaaccccctcctctctgctcttgccctgacccccgccacggaactcctctccgccggcgtggtggtagccccccccccccccccccggcgctccggccggcggcctccggatcgcgcgatctgactttgtgctggaatccccgtcgcgtgtgatattatagctgttgcccttacctcgctgtttcggttgcggtgcggggggttagggttcttgcacaccgctgtggaattgtggatcctagcggctgggatctctctccctcggtccacccacacatgatcttcgcggggaatttggtgtggttttaccaccattacgtgtagggagactagggctcgtgttgtcgtgtgtttgttgttgttgttgttgtactagcttggaggaggctgctgctgcttgctgcttattctcgcgtggttgaccatgaaatcctgaatccccgttttgctttcgattggcgctattgaattgagttttagttttcagctatctttgacttagggaaaccaaacccaaacaaagaagctgcactttccccctactctacctcccatagcagtttgctcattttttgtttggtggcgtgcacatcactatcaaagtagtagtagtatctaaggtccatctcttcgcaagcggtcatcaatcacttaattcttgcaatgcattttgtaattcaatcatagggaatcaaggtgcggtggttaagcccatgcaatttggtaataagcactatagctcatcagtgttatagataagagatcttgtgagtgtttagggttttcgataattcggtcgaccattcgttggttcttggtggaagggagggaggttcttgtttggtgatgtcttgtacctccccagacccgcccgattactgctcggccgcatcgcctgagcttaagctataccaagccttcatcttctccgtgccggttttcttcacgttcgtcttgcttctcttcttctacttgttctacttgcgacggcgcagagcaaactggcagtccttgcgcatgaggactaataacttgatacggggagataaccccagagtaagctagcctccgcgcccttctgttgagtaacttggcttttcaggatatgttagtgtatggggattttgttgtttgatctgtattgtcttgaatatatgcgtagttggagtgcggcataaagaaggagatgcgggaaatgttgcctgttgtggtcttcaaggagagcttcttgatcagggaaacacagtcagtgatctactcctaatctctcttcaatgcagttcatatactgttgtgctagaccataaatctttctcaattgataaccacttccattaatatgtgttgcaccttttattgctccaaaatcatgaaagcacttcgatgtaggttttccgttgggtctggaccaccaatatctcaataattagttcagtaatgaatggaagtgcttctaaattagagccttgagctacatttagagaatgtttccgaagggcaatagcaagcatatcaatgccctgaggccctgaaccatatatgcagttagttaattgctaacgttatagtggatgtgtgccacttgcgcagttagaaaatatattggacaaaacaaagttattcaaatactccaatatttggaaattcttcaaaattggtgcaaggtcggtaagcttaattgatgggtgtattgcttccagctttccataacaatgtgtaaaatcctagtaatgtgtaaaattaggcttgaataaagttctgatggactttctttagaagagatgccatagagtattcgtgagcttaggtgaaattcttttgcatattatcatttgccgaattattgccaaggattttattttgtcaatagttatgtggttatatggtcatatcataatggatatgcataaacagtgcactggttggacacggtaacatatgtattgcaacttattgaatgtacatcaaaatcgcctgttgattcagactttcagaggttcacatgggctaatatgcactcaaaaaaaaaaactgaaagaacatacattagtaaggtttccaatattacccccaaccctcatccccaaaataccaaagaattgtacatgaattacaggaaggcaagatccagcccaagtgctaatattttttaacaatcacggttttcaaatttggtaaataactagaattagtctggaggaaaggacagaaagaagaaagcacttgaatacagaaaatcacatgcgagtcatcctacggatcttatgcatatggagcaacctgtaggtcactcagagttagtctgttccagaataatgttgaattttgtacagataatttactcaaatgtttgacccttattgtggtatttgatcagtgtgtagaattgttttctctgttgctcagagaaactatggatcagtagcaaaccactacaattggcatggtacctttaacacggtagatagtatattatttgcaattaccatatggcttaaaggctttcgttgagactttcttatttcacatttgtcaactggaatatatgtccatagcatagctgagttaagattgtgtgttggttaaactagaatagttgttttctgtcttctgagtactggcattttaccctgaattggttcttttgttctgaacatacaatcattcttgacagatgctctgtctgcttagcagactatcaaccggatgagcggctccagagaatacctccttgtggccataccttccacatcgattgcatcgaccactggctctcgacaaacaccacttgccctctttgtcgagtatccctccttccatcccccaaaaccgccagcattgatccagtggatttggaagcacagaccgttgaagagaacagctctttggatgtacagtatcaggagggccgcattgacgagaacacgcgacaggaggatcagacattgcaacaaggtagtgagggtccaacgcatcaagctgaagaaaacgaagagacatcagtcagagtaaccactgagccccaagtagaggccgaggggtctccaagcacaacctgccggccttgtaaaacgaagaaataaggcttctgctgatgtaccatgtcgtggcgatctgtattttagatgctcattaagagcgtataaagatgtcaggttatagatgggtaaatggtctaatctctgtattcagacagaaataatggtgatggttcatacaaaatttcagatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0557300, RefSeq:Os02g0557300