Difference between revisions of "Os02g0586500"

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(Created page with "{{JaponicaGene| GeneName = Os02g0586500| Description = Similar to Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen)| Version = NM_001...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0586500|
 
GeneName = Os02g0586500|

Revision as of 19:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0586500

Description

Similar to Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen)

Version

NM_001053803.1 GI:115446976 GeneID:4329810

Length

3320 bp

Definition

Oryza sativa Japonica Group Os02g0586500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23460279..23463598

Sequence Coding Region

23460482..23460543,23460627..23460818,23463302..23463378,23463494..23463507

Expression

GEO Profiles:Os02g0586500

Genome Context

<gbrowseImage1> name=NC_008395:23460279..23463598 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23460279..23463598 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagctcgtcaggttcttgatgaagctgaacaacgagacggtaacgatcgagctcaagaacggcaccaccgtccatggcaccatcactggtgttgatatcagcatgaacacgcacctgaaaactgtgaaactcacattgaaagggaaaaatcctgttacctttgatcacctcagtgtgaggggaaacaacattcgctattacattcttcctgacagcttaaacctggagacattgctggttgaggatacaccgagggtcaaggctaagaagccaactgcagggaagcctttggggcgtgggcgcggccgtggtcgtgggcgcggtcgtggcaggggacgctga</cdnaseq>

Protein Sequence

<aaseq>MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVK LTLKGKNPVTFDHLSVRGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPLGRGR GRGRGRGRGRGR</aaseq>

Gene Sequence

<dnaseqindica>3056..3117#2781..2972#221..297#92..105#gaggaggcagctcccccccaaaaaccctagctcaggcttcggcaccgcctctccccccctcgccttcctccccccaccaggcgcctccaagatgaagctcgtcaggtaatccgcggctcccgcttcgctctccccttcccagatttgtttttttttctcctttttttgtggttaactggttcgtttcccgtgcgatttctcccgccgaattcgggtgcaggttcttgatgaagctgaacaacgagacggtaacgatcgagctcaagaacggcaccaccgtccatggcaccatcactggtacgatgtcttggcgaccttttttttttgttgttgttgttctttttggcggcgcgttactagggtttgcgagcggcgtctgtgttgtctatgtggcgcgggatttgattgattggcgctgtggttgcatttcaatggcggattcggtagaaacactaggaggcctttgtgctgaagcttttgttttcgtgacgatgcggagcaaatctagggtgtttgactagcacagttgcattttattatattgtagctcaaagggaaaacctttgtggttcaaattgattcaacagcagcctctcactcaatctcatgaaaaagtgccatcactacaactgaaaagaccatatgcttccaacagatcatgaccagctatgataggtatgtcatgtagtacaggtagaacttcctttgactcctaagaatcatcatcccttgaagcaattggattgaacatttgctgccttctccttttggcaccagcaccatcttttccttttggcatcagcaccagacaccagtttggcttcttgtggtcaatgtcttagagaaggggtttatcgttctactctgctgacatcctcggtgccaatttctctgtgttcctagcagcatatctagttggatgacttggcaatacacaataattatgtaaccccaaatgtgaccattttaaacgttttgctagctggcagctgcatcctagttttcctgctaattaaagagatcgctgacagaggataagtactaagcttcaaacgagtttaggaattcataagataacaccatgctaaaggaagtctgctatgatttacttattttatccaagctatgatatgtgtggaacaataactgaataatgtggcatctgcatttgccttcacatatggtctcactgacagtggtagcctattcttggccagcctgatcaagtctactatttgctggcatcttgcttatgttagagtagtgtttatcaaagtcttactactgaaacaatttatcttctttgatatcaatattacacgtgccatgaacatttttagcatcagcagcttatacttgaggttttcaacttttcatccttattgggcataaccaccttattgtagtatgcaacaattgtatgcagaatctcttttagaaaacaatcatttgctgcaaagcttcatccatgctttccatcaaaacaattaacctttaacaggttatcccttttccataccctgcaccaaaaaaatcagaaaagggaattagaaagcatgtcattgaagtaaaagatggcatatacttgatattgttaaccaacattgaaaatctgaaacaaatcatacataaatttggatgcaagaatggactgatatatatgcgtatatcatgttcataaatttatatcattatttggcttctagtgtattatgaagagtatttgatttgatctatcattgttatgttacactaggttgccaatattttgacttcatgataagtacatgaacatatgcaatgcttaagttcaatgaacatagtttagcacttgtgctgcagttattcagaggccataggtaggttatgcattgatttctactgcagaaggattaagaagcagtgctctcccatttttcagtgctccagcgtcaaggcttaccttgaacctaatgcgccactcttaatcttaataaccaaatttgatcaggagaagtcactctaaggtcacatgtgcataggtggtaatagtctgttgatctgttcaaaacatcacttgtgatacacatgaaacatgctacaggttgaagcaacaggtgcatttaaatttatctgcaaagaagatttaatccaatgcatttaccaatacaatagatcatctcagctctaacatatctatagtagctatttccttggatcttgtaatgctgcattcagatagtcagaaattgacctaacaaataaaatatacacaatatcgacagtgaacattttgttggatcatcaaagtatatcccaaactaatagtctgtatgctgcaatcggacagacagaaattgatcgactctgatcaaataggcataatatcaatactaatattctgatgattctagattagcggaacagaatagcctagtaaatatatcagttagcacagaaatcacaaacaatattagtccgggtctggaaactatcagaaaaagtttttggacccttctttttcataaattagtctctgaacactgtatcaacaatacaagcagaataggcaatctattccagcccttctactttctcttatctatctcaatttatactttttacaactctttacattttcctcaaacccaccataagtctttcatgcacttgttataattaatttgcattgccttttgtttcagcagagctattctcatgcggtcatgcctataatcacctccataagtgactccattatactccatatgcacatcctaacttccaggtctattttgtaggtgttgatatcagcatgaacacgcacctgaaaactgtgaaactcacattgaaagggaaaaatcctgttacctttgatcacctcagtgtgaggggaaacaacattcgctattacattcttcctgacagcttaaacctggagacattgctggttgaggatacaccgagggtcaaggctaagaagccaactgcaggtttgataattgttttgtctctctaagttgattttactgagctgctgaactgtttgtctgatcaaaccttaatccggaaacagggaagcctttggggcgtgggcgcggccgtggtcgtgggcgcggtcgtggcaggggacgctgagcttcactccagttccctatcttggaaacttttgcatccgtgcaaatgtaatctctgctctcgtgttagcttgtacggagtagtgttctgattatggcaaagacgttgatgtaagcactcggcacctctttatcgatgtggattttttcccggttggtatttgaccagatgttcttgttcaagaatatgctacgttacattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0586500, RefSeq:Os02g0586500