Difference between revisions of "Os02g0643000"

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(Created page with "{{JaponicaGene| GeneName = Os02g0643000| Description = Similar to VAP27| Version = NM_001054093.1 GI:115447556 GeneID:4330129| Length = 2899 bp| Definition = Oryza sativa...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0643000|
 
GeneName = Os02g0643000|

Revision as of 19:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0643000

Description

Similar to VAP27

Version

NM_001054093.1 GI:115447556 GeneID:4330129

Length

2899 bp

Definition

Oryza sativa Japonica Group Os02g0643000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26715287..26718185

Sequence Coding Region

26715592..26715699,26716153..26716230,26716855..26716896,26717009..26717131,26717224..26717339
,26717430..26717511,26717601..26717671,26718000..26718159

Expression

GEO Profiles:Os02g0643000

Genome Context

<gbrowseImage1> name=NC_008395:26715287..26718185 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26715287..26718185 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggaggcgaaaaaagattcgatctttggaggccttgcctctggggcgcccgtcggagcggatcgcttcccgtttgatcctcgggagtattcgccggcgatgagctccgactccagggagctgctcgggatcgatcccccggagctcatcttccccttcgaattaaagaagcaaatctcgtgttctctgcacctaacaaacaagacagatgaatatgtcacgtttaaggttaagacaactagtccaaagaagtactgcgtccgtccaaataacggcattgtggctccccagtccacatccaatgttcttgtaacaatgcaagctcagcgggaggcgccaccggacatgcaatgcaaggacaaattccttgtgcagagtgccatagtgacacaagagctcacaccgaaggatatcaccggagacatgtttacgaaagaatcaggtaatgtggtggatgaggtgaagttaaaggttgtttatactcaacctcacccgacatctctcaatggcgggtctgaggaaggtctaggaagcttgagttatcaagaagcaacaaaaggatctagagaatcagaaacagtaacctctgagccattggccttgatttcaaagttgaaggaggagaagagttctgccattcaacagaacatgaagcttcgagaagaactggatcttctaaggaggcaaatggggagtcagcacggtggtttctcactagtttttgtgctggttattgctattctgggaatcctgcttggttttctcattaagagatga</cdnaseq>

Protein Sequence

<aaseq>MQEAKKDSIFGGLASGAPVGADRFPFDPREYSPAMSSDSRELLG IDPPELIFPFELKKQISCSLHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQSTSN VLVTMQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLKVV YTQPHPTSLNGGSEEGLGSLSYQEATKGSRESETVTSEPLALISKLKEEKSSAIQQNM KLREELDLLRRQMGSQHGGFSLVFVLVIAILGILLGFLIKR</aaseq>

Gene Sequence

<dnaseqindica>2487..2594#1956..2033#1290..1331#1055..1177#847..962#675..756#515..585#27..186#ataatattttgctggagaatagtcggatgcaggaggcgaaaaaagattcgatctttggaggccttgcctctggggcgcccgtcggagcggatcgcttcccgtttgatcctcgggagtattcgccggcgatgagctccgactccagggagctgctcgggatcgatcccccggagctcatcttcccctgtgcgttttcttgtcccgagaatttctttttgggggttttttgaagggagttttgcagttcattcggtggttccgatggatttccgggtgtattttaatgcggcctcattcgagaaatttatgtatgaagaaatttcagggttgttctcagggggaatttttccttcttttttgagctaatattgattgttcacttcaccgatagtccgatttgcctttgttttaagcatattcttttgtgcaaattttggtaattctttaatatgtgatgataatattgtcttgttcagaatattcatcctttcgcatcctttttttaatcatgcagtcgaattaaagaagcaaatctcgtgttctctgcacctaacaaacaagacagatgaatatgtcacgtttaaggtattaataaaatctttttggcctctaattccgaggaaatatgcattgcagtaataagtaactaaattaattcaacatcgtttctccaggttaagacaactagtccaaagaagtactgcgtccgtccaaataacggcattgtggctccccagtccacatccaatgttcttggtaatttgatgaattgcgtcagtattatcttattctgaatgactgccttttatgctaagaatttagttatcaattgattatcaaatctagtaacaatgcaagctcagcgggaggcgccaccggacatgcaatgcaaggacaaattccttgtgcagagtgccatagtgacacaagagctcacaccgaaggatatcaccggagacatggtaaccaaccgactttctagtttctagtgtgtcctgcatttgtagcttatgttggctgctttctttgtgtcctaatgagtgatcctatgtagtttacgaaagaatcaggtaatgtggtggatgaggtgaagttaaaggttgtttatactcaacctcacccgacatctctcaatggcgggtctgaggaaggtctaggaagcttgagttatcaagaagtaaggctttcatcaatttcatgtctaacagctatccgccgtcgtttcttgttagtgcattgatccttcattgccttatcatctgaaacaaattgcgaacttctctttgcaggcaacaaaaggatctagagaatcagaaacagtaacctctgaggtatgcatcttcagatgggaaacatctatgttttcttgtgataggtgtcataatttagagatactatgtgtgattttatccaagagcattgcttcagaagttgtttaattatattttacagtgttgctgtgctcttcttatttcctagtcctctgcatgacacttgttttagaactctgatccaacagaactatgtgtgtgctgttttatgctatgcactttgttttttccctgaggaaaactatgtacttttcttgatatatgtgttgcaatgttctcttgttaaatttgacaatgctatgttatcactaaatcctaacttcacatactactataaatttatttttgcttgtcaatcttcttgctccactctacatgtatgatcttttgattaatgttctccttgcataaatcatggctcttcatctcaacatatttagatgccaatgataacttaatctgagggatgcttcatcctctagcatatcttgactttgttagcattttacttttgttacaaactgaggaactgagaggtcttcttatagaggattccgacttcctatgctacctgacaatgatgccaaagcacaatatgctgatctctttcacaactatgtgcagccattggccttgatttcaaagttgaaggaggagaagagttctgccattcaacagaacatgaagcttcgagaagaactggttagcttgattatgcaaacatttagtgacccaatatatttttttactttggcagtaagaaatagattaatttatccccccgcataagctagttaggtttaagcaacagctatgtcgataaatttgcatctccaataaataatcaccacatgatttactcattccctgttcttttactgaggccagcagtgaccagtccacccgaaaaaaacactaatacgttttttagctttgagttagatagacagaataaccagtttacatgcgctttatgtttttctttacttttttgtcaagtttatttgcaacccactaatttctacaagtacagatgtatttcgttatctacaaatatcatcttgtttgtctattatggctttgtgcatcaatgaaatctgaatctaaactgcaacactcacgtagtttcatttatcttctattggaattgaacaggatcttctaaggaggcaaatggggagtcagcacggtggtttctcactagtttttgtgctggttattgctattctgggaatcctgcttggttttctcattaagagatgagcgtctgtgatcatatatcttgttccacttttctgtgaaagagttgatagtcgtgggccttgtctgttgtgttagccatttgtaccaactcatgatcgtcttatcttaggacctgattcctcttgtaatttctgactatcaaattccaatcagtagctactgcatccagtcaataagtcgtctgtccatttagcatgtttgagtataagttttttttggtcaattgtattcatcttttgacacctgtaaatatgacacttcccttaacattatggcttgcgatatgtatatgctggatccttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0643000, RefSeq:Os02g0643000