Difference between revisions of "Os02g0644700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0644700| Description = Similar to Acyl-ACP thioesterase (Fragment)| Version = NM_001054102.1 GI:115447574 GeneID:4330138| Length = 8065 bp|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0644700|
 
GeneName = Os02g0644700|

Revision as of 19:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0644700

Description

Similar to Acyl-ACP thioesterase (Fragment)

Version

NM_001054102.1 GI:115447574 GeneID:4330138

Length

8065 bp

Definition

Oryza sativa Japonica Group Os02g0644700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26833348..26841412

Sequence Coding Region

26834528..26834657,26834796..26834909,26836696..26836829,26836933..26837451

Expression

GEO Profiles:Os02g0644700

Genome Context

<gbrowseImage1> name=NC_008395:26833348..26841412 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:26833348..26841412 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagggtctcttgccgcctcagcattcttcccaggtccaggctcatctcctgcagcatcagctagaagctccaagaatgctgctgttaccggcgaattgccggagaatttgagtgtctgtggcattgtcgcaaagcctaacccacctcctgcagccatgcaagtaaaggcacaggctcaaacccttcccaaggttaatggtacgaaggttaacctcaagacggtgaagcctgacatggaggaaacggtgcctcacagtgctccaaagacgttctataaccaactgccggattggagcatgcttcttgcggctattacaaccatcttcctcgccgcagagaagcagtggacactgcttgattggaagccgaagaaacctgacatgcttgttgacacatttggctttggtaggatcatccaggacggtatggtgtttaggcagaacttcatgattcggtcctacgagattggcgctgatcgtacagcttctatagagacattgatgaatcatttacaggaaacggctcttaaccatgtaaggactgctggtcttcttggagatggttttggggctacaccggagatgagcaaacggaacttgatatgggttgtcagcaaaatccagcttcttgttgagcaataccccgcatggggagatatggttcaagttgacacatgggtcgctgctgctggcaaaaatggcatgcgtcgagactggcatgttcgtgactacaactctggccgaacaatcttgagagctacaagtgtttgggtgatgatgcacaagaaaactagaagactttcaaaaatgccagatgaagttagagctgaaataggcccatatttcaatgaccgttcagctataacagaggagcagagtgaaaagttagcctag</cdnaseq>

Protein Sequence

<aaseq>MAGSLAASAFFPGPGSSPAASARSSKNAAVTGELPENLSVCGIV AKPNPPPAAMQVKAQAQTLPKVNGTKVNLKTVKPDMEETVPHSAPKTFYNQLPDWSML LAAITTIFLAAEKQWTLLDWKPKKPDMLVDTFGFGRIIQDGMVFRQNFMIRSYEIGAD RTASIETLMNHLQETALNHVRTAGLLGDGFGATPEMSKRNLIWVVSKIQLLVEQYPAW GDMVQVDTWVAAAGKNGMRRDWHVRDYNSGRTILRATSVWVMMHKKTRRLSKMPDEVR AEIGPYFNDRSAITEEQSEKLA</aaseq>

Gene Sequence

<dnaseqindica>6756..6885#6504..6617#4584..4717#3962..4480#ttgtccttcggctacatgatttgatggtagcttcaacattagccgattgcatggtgtcttctttgtgtttaccgttcttaatcccatcagttttcaagtttttgatcaggtgcatgttttcttccgttctccaatgctgagtttattttctcgatccccaaattggaacatagctattaggtgagttgatgattgtactcatttttttctgcctttttgtaaaatagcatgcatgtgttcttctgattgccccatttttggacatataacttgataatatcgctatgttttatcttttgtaatgtcacttacatgatcgatctgaccctaattgacgaggtaaattttgattagacatttctacctttgtattcaattctgttctgattcctgaagagaattttacgtttccaagaaacgattgctgacgataacttagttttcctctccatgagagtgatacggaaaatttcaaggctgcactccttttctgcttatcaaataattttctatcatgcagaaaaaaattccacaggtgagaattcgatccagtttgcagcatagcgcaatgaataatatgtgattttaccccttttcagaccttatatatgtcagctactataaatcaacttcatgatttcataaggtgattttcttattctattcctagatgtgttagtcatgtagtagtatttcatagttatataatagaccatataagcttaatctctacataaatatatttatcatcctttgagccagtgaagttagcagtatgaattaacgtgatgatttaaatgttggccgaggaagtctgatgtacgagttaaacatgttgattgagatgttctcacaaaacttcacttttttttaataaatttaattcttcgaacaattaatttatgagaacattgataatacaatctgctaactgcaatttgtactttggctagcccgtgattgctaatgggtaagattattgcataatctttctaacctccatgtatcctgttttgactgttaatgactaatttcttagtgggatttacaatatttgatttacatattatagttttgcaactatgttatacaccaacattccgcagcaacgcgcggggtatcatctagtttccaagatttgtcatcccatatgtgcagcataaaaggcaaatcagccctgtttgacatggctccaatgcttaaattctttagagaaaaaacagactttgtagattaaatcaaagtggcataatctttttattttgataaaaatattagaaaatatcataccctaatattcttagcatagtactccattcatctcacttattaaggtacgatcaaacttggcatagtcttcaaaggctgtgttctttcccccattttcctaacccatctatctcgttttccgcgcacacatttttcaaactgctaaacggtgtgatttatgcaaaaacttctatatgaaagttgtttaaaaaaatcatattaatccattttttaaaaaaatcagttaatacttaattaatcatgcaataaaacgaacttcattttgcgtgctggggaggaggggctcccaacccctcctccgaacacagccaaaagctacttttggactttaaatttgtcatatattataatgtttctagtaacaaaaccatagtcatatgaaagtaaatttaaatgataatccaatgatattattttcatcaaatagaatttaatttataataaactatttattgataaaatattcagagagttgaatattaaaatacctgtgtgccttagtgagtgggccaaattaattaatggagtagtaacagctttaaccaaagaaatttcaacaatttcccaagctagaaaaaacccaactccaaaataaacttgagttagaactgtgttaagcacctaaattgtaatacctgttactctctcgttctcattctatatttgtcctaagttaaatatatctacctttttttatctgtcctaagttaactatgtgtatgtctatcttttctactactccctccgtttcaggttataagacgttttgactttggtcaaagtcaaactgctttaagtttgactaagtttgtagaaaaaataataacattttcaacccaagacaaatttattatgaaaatatgttcaattattgatttaatgaaactaatttggtattataaatattattatatttatatataaacttagttaaatttaaagtagtttaagtttgatcaaagtcaaaatgttttataacctgaaatggagggagtaagtaatttgaaacgaagagagcagacaaataataaactagtaaagcctgtgacttgggttctagtcattgatcgtgtacatgtaggtcttgtttagatcccaaaaaattttagccaaaacctcacatcaaatatttggacacatgcacccctaccagtgtgtggaggcattgcatacacgaaacatggaaaaggaatcaacttgagaggttagacctgctagctctactaggtctggatggtcatgcatttttttttgaaaaaaaccacgctgcaagctcgacagcctcaacctcaatggcaaccatgacaataatatgcatgacaatggtgtaggagaaaagacacgtcgataaccaaagggcgcggctgcgcatacaaaggcggagagaaggaacgatggtggctcaaaaagaaagagcgtcggtggcagtggtgcgtggagcgacactaaagttagtggttgctgatggtctcacacaatccctaatcgaaatatttattttttttcacttagtattgctgatccgtgggccaccagccaatcataaagaaaaatgttgagataaaaggtggagtatcttccccttccttccctttttgactcgaaaaaaaaaagcgtcggtggcggccgtgcgtgtaacaacactaaagttagtggttgctggtggtctgacacaatccctaatcaagtttgataataataataatttatttcctcttattagtattgctgatgcgtgggccaccaatcaatcgtaaagaaaaaaaatgttgagataaaaggtgggggtatcttctccttctctttttttttggctaaaataaaagtggtttctggtagtctgacacaatctctaatcgaaatatttatttttttctcttagtattgctgatacgtgggccaccagccaataataaagaaaaaaaatgttagagataaaaggcggagagtatcttccccttccttttttttggcgtaaatgaaagaaaagagaaaatctcccgtcgtctccttccttgcgccaagaaagacgagccgcggctcaacaccggaggggaggggcgccgatctccatcgccaaggagagcagagcaggggaggggatcctggtgagcctcctcttcctgattcatctctctcccattctagcttcgggggactacttttgcctggaatttgctcgcgttcgttcgtgcgttcgttcgttaaccctagcttcttctcttctagatctggaggaagctcttctcctccttaatttcagagccttaatacaagtagtaacagtttaacctcccccatgtcccaagttggatccgcccctgcgagttccgatattgggtcctcccaattctcaatgccattttgttcatcggggggcatatggttcatttttgcctgcattgattcaaatgtggtttcgaatcgtttgtgaaattcgcgggtgtacttgtttatgatacatgaggccttttttcccccatgaggaggcaaactttttagtgggtggatccactagttcatgcctcaattttttttctcctcttttaagttttccaaagagctacattgttgtaaagtgtctgatacaattgattgtttattcaggttagcgcttttggcgtgtgattgatttctaaacgaattttgggccgtgaggggaagttcaatcatggcagggtctcttgccgcctcagcattcttcccaggtccaggctcatctcctgcagcatcagctagaagctccaagaatgctgctgttaccggcgaattgccggagaatttgagtgtctgtggcattgtcgcaaagcctaacccacctcctgcagccatgcaagtaaaggcacaggctcaaacccttcccaaggttaatggtacgaaggttaacctcaagacggtgaagcctgacatggaggaaacggtgcctcacagtgctccaaagacgttctataaccaactgccggattggagcatgcttcttgcggctattacaaccatcttcctcgccgcagagaagcagtggacactgcttgattggaagccgaagaaacctgacatgcttgttgacacatttggctttggtaggatcatccaggacggtatggtgtttaggcagaacttcatgattcggtcctacgagattggcgctgatcgtacagcttctatagagacattgatgaatcatttacaggtaagtggttgcacattctgtttttagtttcatttctcatttcagcattttgttatagattcgtatgtctctttcaagctggcaattatttaaaattttgcaggaaacggctcttaaccatgtaaggactgctggtcttcttggagatggttttggggctacaccggagatgagcaaacggaacttgatatgggttgtcagcaaaatccagcttcttgttgagcaataccccgcatggtacttttttgcaaacctttgctcctcttgatatatgtatctttggtttctttctatcaattccttactctaagttgtcatttaattttcacattttaaattacttcatatttgttttgcttcttttacagatatcgttttatgtactactttacagctgtgtgtcctttgcatatttgtttttatttgtttaaagaagattcttacacaagcaacagtagtatttagctcaatatttactttaacatggtttatcatattgttgtgtggatctctggtctgatttctccatacactggttggttgatgaaaatcaagtgaatcttttacttgctcgtaaatttcgctgctgcaggtttgcaagaatatgggttgaagtttttatactgctatagaaggccatgtttttctttgatttcccgtgataggcctcatgttttggaggttctgttattcctccttggttgactaagaaatgtgtagtaatatcagctccagttttgttggatcaaggatagattttgtggcaaactaaattttccaattaggaagaaatgaatatattcctacttaagtgggaggagcatgcactttgtttccaattgtcgagccctgattataacacaaactatcaagttatttctttgcatttagaaacaggatttgcatcttgggtaatcctcattaaagacataatctagctttagtacatgcaacataaaagttatgatgccccaaggcctttttggtacagcactgtaagtctgtagctctccttgctctatgttgtcctcaaaagacacaacatcagttaaaagaacagtaatctctcctttagacgtcaattattagtggagtagtaatttagatccaagagcaacttcatttgttacgccttattcattgcccaaagctgcctcattaaatgatgtcttctctgtgcttccttggatcttgaattatgctgagtgggaatgccagaacgggcatgtacttacgttttccagcgataagctccgttttaaaaataaattagcaagtgatttatttgcatttataaacaaaaatttaccactcgggtagttcatattaaagttattgtctagctttattacaagcagcatgaaagttacgataccccaaggcctgagtttggcagcacttaactctgttgccctgttttgtcttgaaaagtataacatcacttagcaggacaatgctctcccgaaaacataactgattagtggatagagggagaggtttagtcccaatagataattgactggttacttcatattcattgcccagagctgcctcattaaatgttctgtcctgtgctttcttggatcttgaattaaaagacgtctgtacagggtaccacacctcaagggatcacaattcagaaagtttccctttattgggctgcagtaaatgattccatcgtgtagaaaagaacaaaagcaattaatgctgtgccatatcatgggagaagctaaggaccgatctagaacagtgaacttttgttgaacagcatctgtcagtttaaatttctaggtggtcatcattcatcaaataagtggtgctagtactactattcacacgttatgtttaaatcctcttgtcaactgtgtcaacaagtggttgaaaacttcttttttggggttttgagttagaaaaatggaagtgcaatttcaaactgtttttttagttcagatacaattgccgatgtctttctgtggatcaaaaagaatgacagatgtattgtaccaacctgctatggttttaggggagatatggttcaagttgacacatgggtcgctgctgctggcaaaaatggcatgcgtcgagactggcatgttcgtgactacaactctggccgaacaatcttgagagctacaaggtttgggcttcaactgtattctattgcaagaatcatctgtatcattttttttgtgaggacatccaatcttggtatttctgcttggtcacatcattgataatcactaattgtgctccttttccaatccatttgttgcagtgtttgggtgatgatgcacaagaaaactagaagactttcaaaaatgccagatgaagttagagctgaaataggcccatatttcaatgaccgttcagctataacagaggagcagagtgaaaagttagcctagacaggaaataaagttggtgatgatgctacagagcaattcataagaaaggggctcactgtaagtcagctagacatggttacatactgaattatcattatgcctcaactgctatcatttatctaagaaaaacagtaataattgatctcacccctcatttattttaaatgatatttgatggactcttgtttactgcaacagcctagatggggtgacctcgatgtcaatcagcatgtgaacaatgttaaatatattgggtggatccttgaggtggttattcttgtcccttatattcattgtttagagaaaaataatttggctttatccttttatatggtacttcctttgtttcacaatgtaagtcattttagcatttcccatatttatatttatgctaatgaatctaaatagatatatgtgtctagattcattggcatcaatatgaatgtgagaaatgctaaaatgacttacattatgaaacggagggagtagttgttagggaaccattttatgtagtacttgcaattattttctagagattctgatctgaccatctgtattgttgatattgtcattagtcttacatctggtcagtcagaaggctttcaaacatgtttctgagttctttctaattttttcccccagagtgctccaatttcagtactggagaagcatgagcttgcaagcatgaccctggattacaggaaggagtgtggccgagacagcgtgctgcaatcacttaccaccgtgtcaggggaatgcaccagcattggcgccgacaagcaggcttctgccatccagtgcgaccatcttgtgaaggctgacattgtgaaggcacacacagagtggcgaccaaagcgatcgcatgcagcagctgagaacgcgtaaacaaacaaaccgacgaaaatctgtggtagggagaatatcaaacttcccttgcctctgttgccctgaagctgatcttgaagtgtgagttgtattctgtaaaaaattagtagtttccatagtgtgaggttggaggggaggtgttggtgcttgcctactgtacctgctacatctattatttcttgattctttgttcgcttttttttttcttttttgtttttaacccctgtggagataagacaggttttgaagtgtggaagaggttgtttcaatcgtctaattgattcaactattcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0644700, RefSeq:Os02g0644700