Difference between revisions of "Os02g0709800"

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(Created page with "{{JaponicaGene| GeneName = Os02g0709800| Description = RabGAP/TBC domain containing protein| Version = NM_001054427.1 GI:115448224 GeneID:4330486| Length = 8067 bp| Defin...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0709800|
 
GeneName = Os02g0709800|

Revision as of 19:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0709800

Description

RabGAP/TBC domain containing protein

Version

NM_001054427.1 GI:115448224 GeneID:4330486

Length

8067 bp

Definition

Oryza sativa Japonica Group Os02g0709800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:30259881..30267947

Sequence Coding Region

30260297..30260624,30261416..30261516,30262008..30262157,30262492..30262608,30262744..30262815
,30263208..30263318,30263397..30263495,30264359..30264415,30264975..30265376
,30265617..30265671,30266093..30266177,30266391..30266498,30266597..30266663
,30267085..30267243,30267645..30267773

Expression

GEO Profiles:Os02g0709800

Genome Context

<gbrowseImage1> name=NC_008395:30259881..30267947 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:30259881..30267947 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtcgagaagaagcctccgccgccgccgccgccgccgaggctgggaccccgcgctcaccggacctccacgacctctccgacgactccgactacgccgccgccgccgccgcgtcctccagtcactcggcgatgcggagcgatctggtggatcaagggtcgggcgagacggcgaaggtggatgtggtgtacgagaaggagcgtgtgacgatccacccgacgcagtatggctccggccggatcagcgggaagctgcgcctctacttgcagcagggctccctgttcctgagttgggagccaaatgagggagttgattctttatcaagcaattcagctaccatggaaatagaaaaatatagaaacctgtacactataaaggccttgccattaagtgatgtacgcttcatccgtaagcacaccccgacatttggattcgagtacataatcattgttctctcatcaggattggcttttcctccattctatttctacaatggtgggcttcgtgaattgtttgcgacactaaagaagcatgtttttattatcaggtcggacgatgatcctaatgtatttcttgtcaacgactttcaagatcctctacagaaaagtttgtcatcactggagcttcctggtgttgccaccgtagcaaatgccatgtcacgacagaactcactcagtttcactagttcagttgatgaagccagacatgggagtgatgccaaacatggggcatcttctagcatgactgaatatgtctcaaagcaaaagcacagatcgaatgatccgggtcgtgatctttctatccaagtactggagaaattttctctggttacaaagtttgcacgagataccacgtcaagtctttttcgggaaaaccacagtagtggtggtcatacttatggaaggcagcagcaagaatatgttttggacaacagagcaaatgataagtacaaagatcagcaaataacaccagataaggattctttgctgtcagattcaatggagtctaataaaattctagcgtggggaaaaccaagagaacaaccgttgagtgttgatgagtggagatccttcttagatcctgaaggtagagttatggattcgaaggcgctgaggaaaaaggttttctatggagggattgaccatgttctgagaaaagaggtctggaaattcctgttggggtatcatgaatacgattcaacatatgccgagagggaatatcttgctgtcatgaaaagaacagaatatgaagccataaaatcccagtggaagagtatttcgtccacacaagctaaaagatttaccaagtttagggaaagaaaaggccttatcgacaaagatgtggtgaggacagatagatcagttccatattatgaaggagatgacaatcaaaatgttcttgtgctacgggatatcctgttgacgtattccttctataatttcgaccttggctattgccaaggaatgagtgattttctggcacctatactttatgtgatggaggatgagtctgagtcattttggtgctttgcaattttgatggaacgactaggagccaattttaaccgtgatcagaatggcatgcatgctcagttacttgcattatccaagctcgtggagcttcttgatcctcagttacataactattttcggaagaacgactgcttaaactactttttctgttttcgttgggttcttatacaattcaaaagggagttcagtttcgatcaaatcatgctgctgtgggaagttctgtggacacattattggtcagaacatttccacctctacttatgcgtcgcgatcctgaaaaggtaccggtcgcggataataggagagcagatggatttcgacacccttctcaagttcatcaatgagctcagtggcgagataaatcttgaccgggcaattcaggacgcggaggcattatgtgatcaggcaggccctaacggggctgcctgcattcctcctggaaccccgccttctatgcccatcgagacggacggtggcctctacgtacaagaagacgaggtcatgtga</cdnaseq>

Protein Sequence

<aaseq>MRREEASAAAAAAEAGTPRSPDLHDLSDDSDYAAAAAASSSHSA MRSDLVDQGSGETAKVDVVYEKERVTIHPTQYGSGRISGKLRLYLQQGSLFLSWEPNE GVDSLSSNSATMEIEKYRNLYTIKALPLSDVRFIRKHTPTFGFEYIIIVLSSGLAFPP FYFYNGGLRELFATLKKHVFIIRSDDDPNVFLVNDFQDPLQKSLSSLELPGVATVANA MSRQNSLSFTSSVDEARHGSDAKHGASSSMTEYVSKQKHRSNDPGRDLSIQVLEKFSL VTKFARDTTSSLFRENHSSGGHTYGRQQQEYVLDNRANDKYKDQQITPDKDSLLSDSM ESNKILAWGKPREQPLSVDEWRSFLDPEGRVMDSKALRKKVFYGGIDHVLRKEVWKFL LGYHEYDSTYAEREYLAVMKRTEYEAIKSQWKSISSTQAKRFTKFRERKGLIDKDVVR TDRSVPYYEGDDNQNVLVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMEDESESFW CFAILMERLGANFNRDQNGMHAQLLALSKLVELLDPQLHNYFRKNDCLNYFFCFRWVL IQFKREFSFDQIMLLWEVLWTHYWSEHFHLYLCVAILKRYRSRIIGEQMDFDTLLKFI NELSGEINLDRAIQDAEALCDQAGPNGAACIPPGTPPSMPIETDGGLYVQEDEVM</aaseq>

Gene Sequence

<dnaseqindica>7324..7651#6432..6532#5791..5940#5340..5456#5133..5204#4630..4740#4453..4551#3533..3589#2572..2973#2277..2331#1771..1855#1450..1557#1285..1351#705..863#175..303#gttgtaatcgcttcattgtccaattttatttagacgtaagcaggcagtactacttatgtacaggtgcggagagttgcatcgggagaaaaagcctactatatgataattcgacggatttgctgttaaatccgagttaaccaaacagaagccgatcagagaccctaccctccgccgatgcgtcgagaagaagcctccgccgccgccgccgccgccgaggctgggaccccgcgctcaccggacctccacgacctctccgacgactccgactacgccgccgccgccgccgcgtcctccagtcactcggtgcgcctctctcccccaccactcgtgtgcttcctgccgttccccgttcgcctcgcctcgcttgctcccgacgcgagcgcgcgattcggtcgcggcgcgagcgaattcgctcgattaggtcgatgatttttgttgggaggttttggggggatttgggatcccgctgctcatcagatgttgttggggcatcggggttcgggggtagtgctctagttccgcacgtaactagttcggcagctgtcacctcttcctccgtacattgattggttttattggttgggtgggtgtgtgcgtgctatggatggcgatgaatgatagcctatgttgagttcccaatttggattgaattgacgttcgtttggttgggtgaactgaatttggtgtttgtttggtgatcgaaggcgatgcggagcgatctggtggatcaagggtcgggcgagacggcgaaggtggatgtggtgtacgagaaggagcgtgtgacgatccacccgacgcagtatggctccggccggatcagcgggaagctgcgcctctacttgcagcagggctccctgttcctggtgagttagaaccccagttagtctgaattgttgattgttcatgaatttgtggtaggttttgatattattgttaccacatttgctgtgaggattgaaccatggtccttttggcttgatggccagggcattcgtgttgctacttgaattatatgttggttggcttatatatctttgcttatcattgtactccatatatgctaatgatacaatatgctactattcctgcatagacgttccttccacattttctgctaaatgtctgatattagaacaagagaactgaaattgaaaatccatatgattgttgttggttggcacctgaatatggttttgttacacatgacatgttatcatattggtacccaagttgcttaattttcttcttcatttgcttatgtctttgttcaaatctgtgtgacagagttgggagccaaatgagggagttgattctttatcaagcaattcagctaccatggaaatagaaaaatgtaggaacaacacaatatatttcttttgtcatacttggtaattgaagtgcagcagtgattacacttgactctttctttacttgcctgactatgtacagatagaaacctgtacactataaaggccttgccattaagtgatgtacgcttcatccgtaagcacaccccgacatttggattcgagtacataatcattgttctctcatcaggtgaagtgctcttctagttgtttgctttcttgtggttagtttgaaactttttggaatttctatagtcacggtgatcactgatcacattagcttttaggtactttatcttacaggctcattgcatttctgcttcttctagctacataatacacatgctgacaaaaatgaaaaaaaatgatttattgtattgatgtatcttttcaagttttgcaggattggcttttcctccattctatttctacaatggtgggcttcgtgaattgtttgcgacactaaagaagcatgtttttattatcaggttttctttctgggttcactctaattaaataattagtcaagctgtcccttgtttgttagtgcctaaattgctcattcctggaaatgcaaaaattgctatctggattatgagtggactataagtgaaatctacatacaacaaatctaccaagtatatccataactggattttcaaagcacttttttttccttctatatgataggatactgtcataaatatttaatatttatgatctaattaacctacacttgggaagatgcttcactggacatttcaacatatctaggagcgtttagtaactcagcctacagaaaactaattaagtaatggagcattagagtgtcatactacaaccaatcaaatgtttacagaagtatcttttgctgcatatatgattggattttctctactctatctcaaggtcggacgatgatcctaatgtatttcttgtcaacgactttcaagatcctctacaggtatgttattatactttcttgtagccagacccataatttctttaagaccaccatgccctcaatagaaactttactgtccttgggaatatgcaaaacaatccttttagtaggagtcccttgtaaagctatatagtcatctttgtttagaagtccatgttctggcctatgtcttgcataagtttaacttagaacgattacttacccatgaacctcaaatccactttatttgatgccttatagaaaagtttgtcatcactggagcttcctggtgttgccaccgtagcaaatgccatgtcacgacagaactcactcagtttcactagttcagttgatgaagccagacatgggagtgatgccaaacatggggcatcttctagcatgactgaatatgtctcaaagcaaaagcacagatcgaatgatccgggtcgtgatctttctatccaagtactggagaaattttctctggttacaaagtttgcacgagataccacgtcaagtctttttcgggaaaaccacagtagtggtggtcatacttatggaaggcagcagcaagaatatgttttggacaacagagcaaatgataagtacaaagatcagcaaataacaccagataaggattctttgctgtcagattcaatggaggtaaccatatctttttttctattgttctttgttattcgtccactacaaattttggaagagagcaacaacagaacaactttttgaagcactcacaagtcatggagacaagcctttaaattttactgttatggttaattcatttttattctaattttttttgtctgaaaacagtaggggatgcacctgcgatatatataaaagaataagtaatacatacagagagagtaaaactaaaatacaatttcatattcacaattaggattaaggccatctgtaatgagaagaaacctaagctaaactagtattatcttctgtcatctgctcatgttcaaaaccattatctgccaacttcctttctattactagaggtagtattagatgtatcttctatgtattatttagcacatatttgttgtcactttagttggaaaacttaaaaaaaaagattttttaaataaaaaatagtcagtttttttcttctgacccctggtactgtccaaagctattacaattttgcatactgcaatgtgtgtaacatcagtttccttgatcttggcagtctaataaaattctagcgtggggaaaaccaagagaacaaccgttgagtgttgatgaggtattgaattctctgagcacttattttacatatctgtccccttatgttcaagtgctctatggtgctaaaattccatgtgctattattctgcttagcgttgcagttcaaataattactagatctgtaactcaatccacaagatacatcagttgtctaacctctaacatacaattggatgagttcaacatttgatttcggatgtatttactatcacagtaaagtattatgatcctcaagacagtcatacttctgttcaatcttgtgacctttgatatttaaacctcttgtttcttggagtcattatgtctttggctcagactctaggcatatgccttggggcttcaagcaagctaagaaatcctgcaggattttagtggaactcaggaactgttgcctcataatttgcaagccatgcttctcctggcaggagaattagcctttagcagatactgtatatttgatactaacaacttgttttctggaggtataaatagattgaaagggatagttacatggaaaattattccttttatccagtaaacatctagttatctgatcatgtcaagcagaggagcattgtgctggatacacacatgaaatattgtgctgcacacacttccattagtgaaaagatttgttttaccaaatggtagtttgacctttttcttcaactcaacggaaggctaagatttagtctggcattttacattaattaagaactgtatgagtttacgctgcacataatgtctttagtttcatggatcttctccaccaaccatctaataattatcatgtattgatcatgttgtaccactgttcctctcagaaacgtcttatgtttgtctgaaatttttattgcacagtggagatccttcttagatcctgaaggtagagttatggattcgaaggcgctgaggaaaaaggttttctatggagggattgaccatgttctgagaaaagaggttttatacttaactttgatttgctataaccactcaacaaggcattcttgtacatgagttttgatgtttaatatgtaggtctggaaattcctgttggggtatcatgaatacgattcaacatatgccgagagggaatatcttgctgtcatgaaaagaacagaatatgaagccataaaatcccagtggaaggtcagtcaaggttcataggttcaatgtgctgcaattcagtgtgcttattaatgctggctaggacatgctactaccatatatattgagtatatttttaaagtagagctcaagtgatgtagactgtcatttgcttttgctcagttttgttagatctgcggtatgtgattttgcttgatgggagcaatgtttctggacatatgattatccatttgctgttctctttatccctaagatcatgctgatagtttgcagtagtaacattacaaatgttaagacactttcagctgttcgtcataacaacaattcatgattcttttacattatggcatacattactcatcttttacatgactattcatgaatcatgattcttcttgatatattatttgcagagtatttcgtccacacaagctaaaagatttaccaagtttagggaaagaaaaggccttatcgacaaagatgtggtatgaatttgtctacttttttttctatctgaacttttcctccttatttccattttagcttcctctctgaccactttttatttttaactgatatccaaactgatcacttgttttaactgttttttggatatcaaggtgaggacagatagatcagttccatattatgaaggagatgacaatcaaaatgttcttgtgctacgggatatcctgttgacgtattccttctataatttcgaccttggctattgccaagtaagtttgcacgttctattacccttcacccgcaattatccaacatcagctgatgaagaaaactgcctgccagtttaagtcatttaagtgaaaaacactgcatttgctagaaagcttccactagatcacataaccctgattcttgttaaatataaggaatgtatacatgctgaatcacaaggcactgcagaatattcatttgttttgtagccatattattacaagtgacagggttaatcatgctacactaaatatttagacctataaagcatgaaatttcgttgtctaggtttctttgtttgtttgctcatgcagcgagcgctctttcttccagggaatgagtgattttctggcacctatactttatgtgatggaggatgagtctgagtcattttggtgctttgcaattttgatggaacgactaggagccaattttaaccgtgatcagaatggcatgcatgctcagttacttgcattatccaaggtattttagaattttccattcttcgagtagataagcagtatcatagtatcacaatagaatttttgttaatccgcatatcctgtgcaaatcttgcaaaaccgttgtgcttaagtcatatcgattgattatgtgtgtatcatttgttatatggcttcattaattgccttcaatcatgcgatgtggccttcgatattatgccaaaaatacatattatatagattgtaaaaaaatgttcaagtgacaagcagttcatgtttatacttcttaaacggcataaaaaaaatcccctctttagttttcataacttttcattattccttattactgccttcaatccttaccatgttatgattatccattatacaaatgtgtctgacaaacactgccagcttaggtgtcagaataactacttttatcaatataggagtattatactttttgtgactgcacaatactaaatttatgtgaaattttctatgtacctcatgcagctcgtggagcttcttgatcctcagttacataactattttcggaagaacgactgcttaaactactttttctgttttcgttgggttcttatacaattcaaaaggtaatatttctatctttccctatttgagttgtatgcattttgcaccttaaacagaaaatctaagttttcgtctttagctttgtaacactatattgctatgttctagttccctgcagagcccattatcttatatagaatccataaaaaatattgaaatctagatgatgaattaatgaaattctctgtagctccaatatttagctacattaagcaaatctaattcctccaaaatgttctcccgaaaatggaggtgcattttgtgtctaagaattagtgacacggattttcaccaaagattttgcctagaagcatgtttcattgttcacacctgttgggctgtatacagactgtatgatagtacgctgctgtcacgtatatcgggtaaaaaccacaggctagtaggaccagtaccttcaagttaccttattagttggtcggttggtccaatggcatcaatcatcgcgcaacaattttgaaagtttatgagctattcctacctttattaacaacaaactgcttatgagctggtgctcaactgaaacctgtaaacttttgacatgaattcaaacctgggttaacctgcaataccagcaccagtggtaacttgtctagaagttaattatcttctgctatctactatacgattttaattacattagtttgctaagaaattttacactgcatcattaatgcagtactccccacccaagcacttgtagaggaaaatgcagcctgcactccatcccctctaatagtctaattaagttactccaatttcttatggattgcagggagttcagtttcgatcaaatcatgctgctgtgggaagttctgtggacacattattggtcagaacatttccacctctacttatgcgtcgcgatcctgaaaaggtaccggtcgcggataataggagagcagatggatttcgacacccttctcaagttcatcaatgagctcagtggcgagataaatcttgaccgggcaattcaggacgcggaggcattatgtgatcaggcaggccctaacggggctgcctgcattcctcctggaaccccgccttctatgcccatcgagacggacggtggcctctacgtacaagaagacgaggtcatgtgagataccggcgattcagtggtcacctcatacgacaactgccatagaaagcattgcactggtttccataattccattgggtgcttggtacgttggtatatataaattatgaaggtgatcaaaataatgaaatctggctgttgtatatatgtacgttgaaatatcagttctcgatgaacccaacaatagttaacacaagtctcttttttttgcttaatggaaatggattgtcttttagacgcctatgtttggcttcactgcgtaaatatataatattatgtcacgtgatacttatcaactggcaaagttttgcagttgggtatttggataccagtaaaatcgactgtctgagtacgatttatagccttcaaggctgtttggactgaagtgatgttgagcacgtaattcgtttgtttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0709800, RefSeq:Os02g0709800