Difference between revisions of "Os02g0730800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0730800| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001054551.1 GI:115448472 Gen...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0730800|
 
GeneName = Os02g0730800|

Revision as of 19:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0730800

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001054551.1 GI:115448472 GeneID:4330618

Length

3072 bp

Definition

Oryza sativa Japonica Group Os02g0730800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31331810..31334881

Sequence Coding Region

31331820..31332142,31332227..31332324,31332493..31332739,31332826..31332923,31333044..31333109
,31333584..31333652,31334120..31334188,31334281..31334387,31334481..31334603

Expression

GEO Profiles:Os02g0730800

Genome Context

<gbrowseImage1> name=NC_008395:31331810..31334881 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31331810..31334881 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgcccgcgcctccctcctcttggccggcggcctcgccgtatccacctccacctccgccgtcgccactgccgcccaaaccgtctcgattcctcacctatcgccgcacacccgccgaaggcgacagcgccgcttcctccgcctggcctccgctgcggcgtcgtctcccccgccgctccccgctgcttcggcgcagccgcattgctctaggtgggtcgtggtgatggagagaccccccgcgccagcgggaggcggcgaggtgtcccgtgcggaggccgtcgaccactacgtcgccacactggccagggtattggggagccaggaggaagcacagatgcgcatatacgatgcttcgtgggatgggagctacgagttcagctgcgagatcgacgatgaagcgtcaagggaccttgcgaaaatgcccggggtattagctgttaagccagatacggataaggttgatatgtcagagaaggataatcatggctcaggcctctcagcagctaacctaggaaatttcagtgatgctgtttccaatcactcttcttctagtggggaaaatgagttttggcttgtgcgaatggagaagcctggggttgaagttgtgacaaaggcacaaatggtggatcattatacccaaaccctcatgaaagtgttggggaatgaaaaggatgcacaagtcagcatatatcacatttcatgggagagggattatggcttctgctgtcacattgacgaagaatgtgccaaggagctagctgatgtttctggagtgttatctgttcaaccggacacaaattttggatccgacaacaaaaattacaaaggtgatgacagcttcaaatcgtctgaagctactcaggctgaagtcaaaactaaaaggctttttgttacaggtctttcattttatacatctgagaaaactttgcgggctgcctttgagccttttggtgaactagttgaagtgaagataataatggacaagatatcaaaaagatcaaaagggtatgctttcatagaatacaccacagaagaagctggaggtgctgctctgaaagcaatgaacggacagataataaatggctggatgatagttgtcgatgttgctaaacatagatcgagggaccgtcaacccccgtatagtgcatcaggtagatccaatcaagtgcttcgatcgcgttatcatactggatga</cdnaseq>

Protein Sequence

<aaseq>MDAARASLLLAGGLAVSTSTSAVATAAQTVSIPHLSPHTRRRRQ RRFLRLASAAASSPPPLPAASAQPHCSRWVVVMERPPAPAGGGEVSRAEAVDHYVATL ARVLGSQEEAQMRIYDASWDGSYEFSCEIDDEASRDLAKMPGVLAVKPDTDKVDMSEK DNHGSGLSAANLGNFSDAVSNHSSSSGENEFWLVRMEKPGVEVVTKAQMVDHYTQTLM KVLGNEKDAQVSIYHISWERDYGFCCHIDEECAKELADVSGVLSVQPDTNFGSDNKNY KGDDSFKSSEATQAEVKTKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKR SKGYAFIEYTTEEAGGAALKAMNGQIINGWMIVVDVAKHRSRDRQPPYSASGRSNQVL RSRYHTG</aaseq>

Gene Sequence

<dnaseqindica>11..333#418..515#684..930#1017..1114#1235..1300#1775..1843#2311..2379#2472..2578#2672..2794#ggaggagaagatggacgccgcccgcgcctccctcctcttggccggcggcctcgccgtatccacctccacctccgccgtcgccactgccgcccaaaccgtctcgattcctcacctatcgccgcacacccgccgaaggcgacagcgccgcttcctccgcctggcctccgctgcggcgtcgtctcccccgccgctccccgctgcttcggcgcagccgcattgctctaggtgggtcgtggtgatggagagaccccccgcgccagcgggaggcggcgaggtgtcccgtgcggaggccgtcgaccactacgtcgccacactggccagggtattggggaggtaagtggtgggaggctgctttttttttttttttttttttttttgcccccttgcgcactttctgaggttgaaaggatcgtgcagccaggaggaagcacagatgcgcatatacgatgcttcgtgggatgggagctacgagttcagctgcgagatcgacgatgaagcgtcaagggaccttgcgagtatgttgttgaatcctcggtcaagtcaattgtgcactttaatgagctaactttgcctcgtgcaattttgcatgaaaatgtttgaattcttgtggtagatgttttctgctactcatataacctgagcttgtcatttgtgttagttgcttatgctcttccaatgtacagaaatgcccggggtattagctgttaagccagatacggataaggttgatatgtcagagaaggataatcatggctcaggcctctcagcagctaacctaggaaatttcagtgatgctgtttccaatcactcttcttctagtggggaaaatgagttttggcttgtgcgaatggagaagcctggggttgaagttgtgacaaaggcacaaatggtggatcattatacccaaaccctcatgaaagtgttggggaagtatgtagcctcatcatcaaccttgcttctattttgctatatatgccctgtggatgatacaactgttctttcttcccaatttctagtgaaaaggatgcacaagtcagcatatatcacatttcatgggagagggattatggcttctgctgtcacattgacgaagaatgtgccaaggagctagctggttagcaacttttgttgtccactccttaatatgcatattatatgactattctatttctaaatttctataggaaactatatatttatttagacgcgctgacattataagtttgcacaccagatgtttctggagtgttatctgttcaaccggacacaaattttggatccgacaacaaaaattacaaaggtttgactattgtattctgtttctcatttcatatatttatatttatattgtagtcctgaatcctatcatcaaaatcgtgcctttttgaatgtcatgtgccacatcaatgccttgatttttgttccaacgttatttttttctgaaatgaatcattccaataatatatttcctgctaagaagcaaaatgctttgttcccgactcctagccacctaagagggtggcaaaaatactactttattcatgcctctaacctgaactagaatggtagatatcctatatcattaaattttgatgctactgttaaatattcctggggtcttaatttggtatgaacatgttgattctgttacatcttgtactcactggcatattctcccctgaaaacatacctagtaggccttgcaggtagtgtattcattcatagtgctaaggaataatgaataaaacacccacatcgctttttatgatttcaggtgatgacagcttcaaatcgtctgaagctactcaggctgaagtcaaaactaaaaggctttttgttacaggtaaagtcatcatgtactacacatgaatttcagtgtgtttatctaatcatttatcatttacatgagaatgctatcttctttgtcctggagtaatatattttgtgtcctccctattgaatcgctatgtttttatgcccaatttttattattcagtggataggtaggtagtctaaattagacaataagaacctatgtgagggatagtagttctaaaatgtgaatgactaaacccccactgagaaatattggttagatgcaaagcatatgaaaataagtgtcctccatcagatttcaagtgtaacaagtcagacgagaatgggagatgaaaatcttctgttgtttttgctctcatctgtgagacaagcaacactgcacaacaaaagcatacactgcaatagaagatcagttatattttaatcctgttttacttattttaaatctggtgtgatatttctaatttctggcaggtctttcattttatacatctgagaaaactttgcgggctgcctttgagccttttggtgaactagttgaaggtttgttctgctaatacagaaatgctcgtacatctccattcagatcttttcgtttgagatattgagtttgatccattattaaattattacagtgaagataataatggacaagatatcaaaaagatcaaaagggtatgctttcatagaatacaccacagaagaagctggaggtgctgctctgaaagcaatgaacggacaggtaacctgacaaaattctctttactggtaggctggtaatatcttcaagacattcatttatctctcgagcttatatatacgcgtcaatttacagataataaatggctggatgatagttgtcgatgttgctaaacatagatcgagggaccgtcaacccccgtatagtgcatcaggtagatccaatcaagtgcttcgatcgcgttatcatactggatgaacaaagcatgacacctagagattagacacaagattagcagtgagtacgaagtagaaaccatagttttccggtggtgttgtatttttgcgtggcctgctattctaatgtttccaagagatgatagcgggctacagattccataagtttagtaatatctaacatgtactggattgatgcaatatcttttgatactgcattggtaatatgagcttgaatagataatctcatgtaacatatttctatcaacaaataatgtgaaaaaaagagatgtgattaat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0730800, RefSeq:Os02g0730800