Difference between revisions of "Os02g0733300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0733300| Description = Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)| Version = NM_001054568.1 GI:115448506 GeneID:4330637| Len...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0733300|
 
GeneName = Os02g0733300|

Revision as of 19:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0733300

Description

Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4)

Version

NM_001054568.1 GI:115448506 GeneID:4330637

Length

3807 bp

Definition

Oryza sativa Japonica Group Os02g0733300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:31460315..31464121

Sequence Coding Region

31460534..31460764,31460858..31461265,31461351..31461605,31463068..31463182,31463279..31463796

Expression

GEO Profiles:Os02g0733300

Genome Context

<gbrowseImage1> name=NC_008395:31460315..31464121 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:31460315..31464121 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggcggcgtcgttgagagtcgaggcggtggcggtggttgctgcggctgtgctggtgctgctgctctcgccggctgcggtggtggtggtggccgggcagcatgattacggcgacgcgctccataagagcatactgttctttgagggacagcgctccggcaggcttcctcccgaccagcgtctccgctggcgccgcgactccggcctccacgacggcgccgccgccagcgtggacttgaccggagggtactacgacgccggcgacaacgtgaagttcgggttcccgatggcgttcacggcgacgctgatgtcgtgggggctgatcgacttcgggcggagcttcgggccgcacaaggaggaggcgaggaaggcggtgcggtgggcgacggactacctgatgaaggcgacggcgaagcccaacaccgtgtacgtgcaggtcggcgacgccttccgcgaccactcgtgctgggagcgccccgaggacatggacacgccccgcaccgtctacaaggtcgacccctcccaccccggctccgacgtcgccgccgagaccgccgccgccctcgccgccggctccatcgtcttccgcgacgccgaccccgcctactccaagcgcctcctcgaccgcgccatcgccgtgttcgagttcgcggacaagtaccggggcccctacagcagcagcctccacgacgcggtgtgcccctgctactgcgacttctccgggtacaaggacgagctgctctggggcgcggcgtggctgcacaaggcgtcgcgccgccgcgagtaccgcgagtacatcaagaagaacgaggtggtgctcggcgccagcgagtccatcaacgagttcggctgggacaacaagcacgccggcatcaacgtcctcatctccaaggaggttctgatggggaaggacgagtacttccagtcgttccgtgtcaacgccgacaacttcatgtgcagcctcctcccgggcatctctaatcacccccagatccagtactccccaggtgggctgctgttcaaggttgggggcagcaacatgcagcacgtgacatcgctgtcgttcctgctgctcgcctactccaactacctgagccacgccggcgcgcgggtgtcgtgcggcgcgggcggctcggcgtcgccgacgcagctccgccgcgtggccaagcgccaggtggactacatcctcggcgacaacccgctgcggatgtcgtacatggtgggctacggcgccaggttcccgcggcggatccaccaccgcgggagctccctcccgtccgtcgccgcgcacccggcgcggatcgggtgcaagggcggcgccgcctactacgccagcgcggcgcccaaccccaacctgctggtgggcgccgtcgtgggcgggcccagcgacgccacggacgcgttccccgacgcgcgcgccgtgttccagcagtcggagcccaccacgtacatcaacgcgccgctcatgggcctcctcgcctacttctccgcccacccaaacccagccgagtgggccgacgactag</cdnaseq>

Protein Sequence

<aaseq>MLAASLRVEAVAVVAAAVLVLLLSPAAVVVVAGQHDYGDALHKS ILFFEGQRSGRLPPDQRLRWRRDSGLHDGAAASVDLTGGYYDAGDNVKFGFPMAFTAT LMSWGLIDFGRSFGPHKEEARKAVRWATDYLMKATAKPNTVYVQVGDAFRDHSCWERP EDMDTPRTVYKVDPSHPGSDVAAETAAALAAGSIVFRDADPAYSKRLLDRAIAVFEFA DKYRGPYSSSLHDAVCPCYCDFSGYKDELLWGAAWLHKASRRREYREYIKKNEVVLGA SESINEFGWDNKHAGINVLISKEVLMGKDEYFQSFRVNADNFMCSLLPGISNHPQIQY SPGGLLFKVGGSNMQHVTSLSFLLLAYSNYLSHAGARVSCGAGGSASPTQLRRVAKRQ VDYILGDNPLRMSYMVGYGARFPRRIHHRGSSLPSVAAHPARIGCKGGAAYYASAAPN PNLLVGAVVGGPSDATDAFPDARAVFQQSEPTTYINAPLMGLLAYFSAHPNPAEWADD </aaseq>

Gene Sequence

<dnaseqindica>220..450#544..951#1037..1291#2754..2868#2965..3482#actctgtgcaacaccgtgcggtagcagagcaagagcagcaaaaaaaaaaaccaccacgcctcgttcagtcactcgcacgctcgctcgatcacccggccgccgcgaagcgtcgaccgaagtgtatcgcacatttcgaaagttcttcgcgggcaacagaaagcagtttgtggtgtgcattgccgatttgccattgcgttgggttcatttcttccatcggcaatgctggcggcgtcgttgagagtcgaggcggtggcggtggttgctgcggctgtgctggtgctgctgctctcgccggctgcggtggtggtggtggccgggcagcatgattacggcgacgcgctccataagagcatactgttctttgagggacagcgctccggcaggcttcctcccgaccagcgtctccgctggcgccgcgactccggcctccacgacggcgccgccgccagcgtacgtattctcgtcctataacttggcgttaagaatgtactactggtgaagcagcattgtgatttgtgagtaacctgctgtggccgcgtgtaggtggacttgaccggagggtactacgacgccggcgacaacgtgaagttcgggttcccgatggcgttcacggcgacgctgatgtcgtgggggctgatcgacttcgggcggagcttcgggccgcacaaggaggaggcgaggaaggcggtgcggtgggcgacggactacctgatgaaggcgacggcgaagcccaacaccgtgtacgtgcaggtcggcgacgccttccgcgaccactcgtgctgggagcgccccgaggacatggacacgccccgcaccgtctacaaggtcgacccctcccaccccggctccgacgtcgccgccgagaccgccgccgccctcgccgccggctccatcgtcttccgcgacgccgaccccgcctactccaagcgcctcctcgaccgcgccatcgccgtaagtacaccagtgcgcgccaccgcggcagcattgatttcgattgtttcctcatgtccacgttatctgcttcgtgtactcctaggtgttcgagttcgcggacaagtaccggggcccctacagcagcagcctccacgacgcggtgtgcccctgctactgcgacttctccgggtacaaggacgagctgctctggggcgcggcgtggctgcacaaggcgtcgcgccgccgcgagtaccgcgagtacatcaagaagaacgaggtggtgctcggcgccagcgagtccatcaacgagttcggctgggacaacaagcacgccggcatcaacgtcctcatctccaaggtaaatgcaccattcctccatgattttactactgtgtgccgatgctgacgcgcttttcaaagaagcctcgtcatttttggcagcttcattatgccttcgtctttcacaaagagttgcccaaaccgcaagttatccggtagtactcttgaaacctctttttactgttaataataaagatctactaatgactgcataactgactgcgtacggaattgaaccttttaagttttaacccttttagctttacatgtgggctcaatcaggtttgttctgaacttctgatgcttgtctttgaatactcaaagagtcaaagtaagccagtacaccctgacggccgtgacaggagaactgatagtatcacgtagagtacgtactccgtaatactatactgctagtaatagcgtactttgactagcagcctaatccatcatactccctccgttccataatataaagtatacatgtatgtaagtaattaactatgacttattctctattaattattttttaatcctctctcatgttctctaattttaagagcacccgcaatggtaaagtaaagtgctctctataaaacatgttcatctcagcaatagactagattaatagtaaaccacctcaatagtatgtctacatgggtatctatacctctctcatgcattgcctcgtttttctctatagattatctctaagttagtagatagctttgctctctctattcatttaatatcttccaagtaggaaaatatgctgacatgaatctcttgtagagagcttatagataaccattgtgggtgccctaatggatgcatgcaatgtatttattaggatgatccatactacaatatgataataattattttttggtatttgggttaagggtggttatgccttagaacaagtataatagtgagctataagcctactataagcttaggtggataagagagatactgaaaaatcaaagttgtgggctctcatgcaagagctagcttatcacaagatccaagacaaatacattaaatgcataagtgagagatagagagaagataagaaaaatataaccaatcttatagctaatctattatatatattggctttaagatgaattaatagtaggaactgagctagtatactgctattatattttggaacggagggagtactagtagagtagtagtgtacgactactgtatgagcatgcttgtccgttgcactgcactcctcctatgatagcctcctaggtccttgtgctccggttgctgcccgtgctgcagtctactgtagaagtagcagggaagaacgcttttcagtgctcacggtcacgggtcgatcgattctctcgtgcaatgtccaaaacaccctgagttctagccttctaggggccagtactacaaacaactgtactaccagtaggagtattactgtactgcttacgttaattaatcttgcgttactccaggaggttctgatggggaaggacgagtacttccagtcgttccgtgtcaacgccgacaacttcatgtgcagcctcctcccgggcatctctaatcacccccagatccagtactccccaggttaatcaatctctctatcaccatctctctctctctctctcttttctcagctagaaccgcagctcttaaatttgttgtgttggcattgcaatgcaggtgggctgctgttcaaggttgggggcagcaacatgcagcacgtgacatcgctgtcgttcctgctgctcgcctactccaactacctgagccacgccggcgcgcgggtgtcgtgcggcgcgggcggctcggcgtcgccgacgcagctccgccgcgtggccaagcgccaggtggactacatcctcggcgacaacccgctgcggatgtcgtacatggtgggctacggcgccaggttcccgcggcggatccaccaccgcgggagctccctcccgtccgtcgccgcgcacccggcgcggatcgggtgcaagggcggcgccgcctactacgccagcgcggcgcccaaccccaacctgctggtgggcgccgtcgtgggcgggcccagcgacgccacggacgcgttccccgacgcgcgcgccgtgttccagcagtcggagcccaccacgtacatcaacgcgccgctcatgggcctcctcgcctacttctccgcccacccaaacccagccgagtgggccgacgactagaacaacccgccaaagtatatcagctatacgggcctgggctattgtttgttttgtcagggccgaatcgggtgattattgcctggttgattgatactacttgtgtaaccaaatatagttaacttcctctacaaaaccccaacaaagtatagttaactgcagccacctcctttcatgcgaaaaatatcggccaggaggaatgcataggctttattaggctgctactcctactagcaatgttgtaacagtactgtagacatagttacacttgtactgctatggttcagcgagtggattatatataaagtgcaccaccgacgtttcctct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0733300, RefSeq:Os02g0733300