Difference between revisions of "Os02g0762800"

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(Created page with "{{JaponicaGene| GeneName = Os02g0762800| Description = DEAD/DEAH box helicase, N-terminal domain containing protein| Version = NM_001054742.2 GI:297599953 GeneID:4330819| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0762800|
 
GeneName = Os02g0762800|

Revision as of 19:23, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0762800

Description

DEAD/DEAH box helicase, N-terminal domain containing protein

Version

NM_001054742.2 GI:297599953 GeneID:4330819

Length

8771 bp

Definition

Oryza sativa Japonica Group Os02g0762800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33012785..33021555

Sequence Coding Region

33012785..33013132,33014586..33014778,33015417..33015475,33015557..33015631,33015925..33016038
,33016144..33016263,33016572..33016584,33016789..33016880,33017446..33017532
,33017622..33017696,33017998..33018048,33018220..33018315,33018503..33018589
,33018680..33018736,33018843..33018968,33019077..33019317,33019396..33019482
,33019628..33020005,33021215..33021555

Expression

GEO Profiles:Os02g0762800

Genome Context

<gbrowseImage1> name=NC_008395:33012785..33021555 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33012785..33021555 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccttcgacgagcaaatgcaaccgcatcagccgcgtcgccgatgaggaggaggaggaggagatcgttgccgtctcctccgacgccgacgaatcggagtcagagtcggaggtggggagtggagcggaggaggaggatgacgactacgtgggggagagtagtgactcggccggcggcagcggcagtggcagcggcgacggcgacggcgacgaggaaggaggtaggagcgacattggcgatggcgagggcgagggcggcgggcggcgagttcggagcgcgtgtcgcggcgtgagagcgaacgaccgggagaggaaatcgcagaatgtggatgccctcgtcaggggaaatctagttgtaagaaggcagccacttattccacgtattctttcggtttctgatgcggcagcaatagctcgaaagccattcaaacctccctgtcaaaatggatacagtgaaaataatgagcaacttgctcggcgcctttcagctcgtaaaagatttgtcccatggggttcggtgcagccatttgcagttacaaatattcttccacaatcacctgctgtttctagtgatgattccgtagaaaatgaggaatcccttccaccaggcatagagccattgattttgtggcaacccgaggggcgtgacaaggaaaacagcaatttttctgcaatcaaggttgatcacttgcttgtacgttacctccgaccccatcaaagggaaggagttcagtttatgtttgattgtgtatctgggttgttaaatgatgatggaatatctggttgcattttagctgatgacatgggattggggaagactttacagtcgataactttactatacacccttctttgccaaggatttgatgctaagccaatggttaaaagggctgtcgtcgtaacccccacaagtttagttagcaactgggaatctgagataattaaatggttaaaaggcagagtgcagttgcttgctctttgtgaaagcacacgcgctgatgttctttctggaattgaaagtttcttaaaacctttgagccgtcttcaggtactcatcgtatcttatgagacattccgcatgcattcttcaaaatttgaaaggccgggaagctgtgacctcctcatatgtgacgaggcccacaggctgaaaaatgatcagaccctaaccaataaagccttggctgcccttccttgtaaacggcgtatcctgttatcaggcaccccaatgcagaatgatctggaggagttcttttcaatggtaaatttcacaaacccaggagttctgggggatgctacatatttccgcagatattatgaagcaccaatcatttgcggaagagagcccacagcaagtgcagaagaaaagaacttgggatctgagagatctgcagagctcagtgcaaaagtaaatctgtttatattgagacggacgaatgccctgttatccaatcacttgccaccaaagatcgttgaagtagtgtgctgcaagttgactgctttgcaaactgcgctgtacaaccacttcatacattcaaaaaatgttaaacgcttgatatctgaaggaacaaagcaatccaaagttttggcttatattactgctcttaagaagctatgcaaccatccaaagctgatctatgacaccataaaaagtaataattcagggggctctggttttgacgactgcctgcgcttttttcctcctgaactgttttcgggaaggtcaggttttgtgacattggatctgtttgcacaattatgtcgggaaaggagatacccgtatattaggcttgatggagcaacatccattaataaaaggcaaaagttggtgaaccaattcaatgatccatccagagatgagtttgtctttctacttagtagcaaggcaggtggctgtgggcttaatttggttggtggaaatcgattgattctctttgatcccgattggaaccctgccaatgataagcaggtatatcagcgtcagatgtcgaaagaaggtctccaaaaagttattcagcaggaacaagcagatggcaaaatgcaggggagttctctttcaacagaagatctgcgtgatctttttaccttccatgaacaaatcaggtctgaaatacatgaaaatttgaagtgcaatcgctgtaacaaggatggatgtatggttctcgatggtagcaaatttgattcagcagccactgagcatgaggcttctaactcaggagagaacagttacattgatattggtggatttggagcgatctctggatgtgtgcagaaaatgaatagttcgaatcaacaggtttcttttgttttcacaaatcagatcgatgggaaacttgttccagttgaatctatggcgcgagctgcaactcatcgaacacatgaagtgactgttaatgcagaaaaagaagtgggaaaaatcaattcttctaatgtacctggaaccgaacggcaatctctacttggaaaaaatctgaagatgatgggattcaatttaaagaattcgtctatgaaattcccaactaagtccagaagaatgctgccaaactgtttgcaagggatgaacaaaaccagcacatcttcagatcatcaacaaactaaaaagcttcatgttatttctgatgcgtctgatgatgattttgtatga</cdnaseq>

Protein Sequence

<aaseq>MPSTSKCNRISRVADEEEEEEIVAVSSDADESESESEVGSGAEE EDDDYVGESSDSAGGSGSGSGDGDGDEEGGRSDIGDGEGEGGGRRVRSACRGVRANDR ERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLARR LSARKRFVPWGSVQPFAVTNILPQSPAVSSDDSVENEESLPPGIEPLILWQPEGRDKE NSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQS ITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADV LSGIESFLKPLSRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKA LAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTA SAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHF IHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIYDTIKSNNSGGSGFDDCLRFFP PELFSGRSGFVTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLL SSKAGGCGLNLVGGNRLILFDPDWNPANDKQVYQRQMSKEGLQKVIQQEQADGKMQGS SLSTEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCMVLDGSKFDSAATEHEASNSGEN SYIDIGGFGAISGCVQKMNSSNQQVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNA EKEVGKINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTS TSSDHQQTKKLHVISDASDDDFV</aaseq>

Gene Sequence

<dnaseqindica>8424..8771#6778..6970#6081..6139#5925..5999#5518..5631#5293..5412#4972..4984#4676..4767#4024..4110#3860..3934#3508..3558#3241..3336#2967..3053#2820..2876#2588..2713#2239..2479#2074..2160#1551..1928#1..341#atgccttcgacgagcaaatgcaaccgcatcagccgcgtcgccgatgaggaggaggaggaggagatcgttgccgtctcctccgacgccgacgaatcggagtcagagtcggaggtggggagtggagcggaggaggaggatgacgactacgtgggggagagtagtgactcggccggcggcagcggcagtggcagcggcgacggcgacggcgacgaggaaggaggtaggagcgacattggcgatggcgagggcgagggcggcgggcggcgagttcggagcgcgtgtcgcggcgtgagagcgaacgaccgggagaggaaatcgcagaatgtggatgccctcgtcaggtatgctgggaagagcccatttcggctaatagattagttgatttcttcttcgaggtgtacgtgcgtgagatcgtggcgtgtcgacgcaccataatagattcctagggctcgcatgtgtgcggatctagattttgatggtggcgagattgttcgatgtacgcttagttgcttacgactgttatggaactctgtcttggggttcctgatgcaattccacattggacattttcccagaaggccaacagcccagcttgggtttacatttcttccccatgttgtttgatttaggtaccctagtctggtaacatttggttcatttcctcataaatttagggtaatagttataaaccgtagttggcgaataacatttttattgtctgggcaatggtagagttggaatctatactccactgactgggagaacacatttgtatccctggatcgaccctaagagttgtgatgggtttatttgctgaagaagttcaaagtgaaatccctgaaaccctgaacgtcgatagcgtaacataggccgtttggctagataaacatgcattatttactaaatcatgaataacaggattcatttaattcaacattataaattacctctaaaagtatattatggatataggcatgacagtgactagtacacattgttcatgtgatctattggagtccaccaatatcactgtatttggccagttgacttttggacactggaagtccggaacaaccttgctccatgcgatatgatgctagtattcacttcaaccttttttacctgtatactgtaaacttcaaatttgtcaaatgcctttaactttcttcacataaacaaaactgggggatttcctgtgcaattatatagatattaaaagtagaattgggtttaatataaaactcttacattctgtttctatagatacaattgtaatttgtatacaactgttcctatcaatctacactgctataatttggtcccaccatgatctaatggcttaggttttatttttttctccaattaatgtagcaatctctagaccttcacagcgaatgtggtgggtgatggcttcttttcgagctatctttataatataggagaagagatagatagatagatagatagattgtttcgactcgatccactacagcctgagtgacaaacagttcgtcttgtttcatattatctttctttccggtttatgtcaggggaaatctagttgtaagaaggcagccacttattccacgtattctttcggtttctgatgcggcagcaatagctcgaaagccattcaaacctccctgtcaaaatggatacagtgaaaataatgagcaacttgctcggcgcctttcagctcgtaaaagatttgtcccatggggttcggtgcagccatttgcagttacaaatattcttccacaatcacctgctgtttctagtgatgattccgtagaaaatgaggaatcccttccaccaggcatagagccattgattttgtggcaacccgaggggcgtgacaaggaaaacagcaatttttctgcaatcaaggttgatcacttgcttgtacgttacctccgaccccatcaaaggtaatatactccttttgcattatcctcttccatatatgtttatttggaggcacttcataaaaaacacctattaaagtggtgatataattaaactttagttcagtacccatctctttacaatttacatgatgatgttctgatgcagggaaggagttcagtttatgtttgattgtgtatctgggttgttaaatgatgatggaatatctggttgcattttagctgatgacatggggtactacgctgggtccctccatcttgtcttttctttttcattattatataatgcttaacttgttttatacttgtccagattggggaagactttacagtcgataactttactatacacccttctttgccaaggatttgatgctaagccaatggttaaaagggctgtcgtcgtaacccccacaagtttagttagcaactgggaatctgagataattaaatggttaaaaggcagagtgcagttgcttgctctttgtgaaagcacacgcgctgatgttctttctggaattgaaagtttcttaaaacctttgagccgtcttcaggtgttccttttctcattcattttcatctatgctattttagttcagaaacaaacacaagttgatggtaatgtcttctgaaaatatatctttattatgcattcccttcaggtactcatcgtatcttatgagacattccgcatgcattcttcaaaatttgaaaggccgggaagctgtgacctcctcatatgtgacgaggcccacaggctgaaaaatgatcagaccctaaccaataaagtatatcaactgtaaatttgttacatctcaatattttatacacgtgaattgtttgcaccacatatattcctccttgatgttctcatcacaacaaataatgttgtaggccttggctgcccttccttgtaaacggcgtatcctgttatcaggcaccccaatgcaggtaattttagctttcctgttttgttctgtctttctttcttgaatggaacaaatgttttcaatgtcaatcgatacaatttttttcctgcagaatgatctggaggagttcttttcaatggtaaatttcacaaacccaggagttctgggggatgctacatatttccgcagatattatgaagtaagtattgaagttaatacgaatcaagatatactgcaaaaatatgagttagtatattgggaggaaaatattagagttcattagtccaaggatttcctttttgtttatctgtgtgcctatgttcatgtgagatgtgcacccaatatttctttgatttatctctcatattacctgcccctgactgaaggcaccaatcatttgcggaagagagcccacagcaagtgcagaagaaaagaacttgggatctgagagatctgcagagctcagtgcaaaagtaaatctggtaagacttgtccttctgatgaagcctgttcaccaacatgattatttttatcatgtttatgattcatgggttatgatgtcttgcgccttttaagttgttttgacgtatttccttctgttttaatataaccagacattaatcatgttttgatgctttcttgatgatatccagtttatattgagacggacgaatgccctgttatccaatcacttgccaccaaaggtatgctcatatatttagttgaactctttgaattttctgtttagttaagttttgccctatattgttcgttgcacctttgattgaaagaactatagaacatttatctatctgaggttctaaaatgtggtcaactcatcttctagtgcttatacagcatagtcgtacaaggttggggcgcatgttccttctatgcggtcttgtaggccttattttgaaaactgtattcctcttattttataaggttccttttggaagttcaaatgatttttctgccttagcattgcttaatgcttatacacagatcgttgaagtagtgtgctgcaagttgactgctttgcaaactgcgctgtacaaccacttcatacattcaaaaaatgtgagtgcctaacatcacatagttccaagtccaaacattttgtttagtaggcactatacctacaacactgtattatttgcccttttcaggttaaacgcttgatatctgaaggaacaaagcaatccaaagttttggcttatattactgctcttaagaagctatgcaaccatccaaaggtaaataattttaatgcgtcactagaaatgcatttctcgctgtttcgtcgatagtaacttcagtgatattcctacaaagttcattaacaatcttattacttctactatcatctctcttagtcacttccatacaaaataaaactctgacagcattgcaaactccttattgttaccatgtggtatcctgcatgaaaaactggaagtaatagattttgaagaaaaggctcctcattggtatttttttcaatgtgaaacaaaattattattatttttgtcatgataattctgtcatgtgtcctgctcagattgacagtgttgtaacttgaatatataatccttgtaatatgcaaaattagcacgggccaagtctgaagtctcactattttcctttcttgattatcttgcataaaggaagttagatgacataatggttacaaagaatctctgggaaactgtttcttgtgacactgttgctactagccatcctgcatgttatagtttcaacttttgggttgtaataagcacgatacatgatgtttgttgtttgactatatttgtatcgcagctgatctatgacaccataaaaagtaataattcagggggctctggttttgacgactgcctgcgcttttttcctcctgaactgttttcgggaaggtatttcacactttctaactagcttcaaaattagctcgcccaacttatagcaacttctaattttgtgcaagatctggatcatggaccggtggaggaggaatgtgggtagaactgtctggcaaaatgcatgtcttagctagattactggggcacctccgtctgaaaactgatgatcgtattgttcttgtatcaaattatacccaggtcaggttttgtggtacatcattttaatatatatgcctggcttccttctatagctgtcaaaataatatatttcgaagcgcttgattttacccatgaccttattttctccacatcttagtgcctacctctgctatgtatggctcattctccataattatctcaaatcagtagttgagcatgtactgcgcttttaaactgcatagaatgtattttcttgatacatgagaatagagtagttattgtaaattattttcctcttttgatacctatacagttaggaacaaaacaataattgatcattgttttcttctaaaaattcagacattggatctgtttgcacaattatgtcgggaaaggagatacccgtatattaggcttgatggagcaacatccattaataaaaggcaaaagttggtgaaccaattcaatgatccatccagagtatgtaaaatctgctacatacccctttttagatcaagaatctgccctgtgtcctgaagaactgttccaaatttgaacatacaactatatatgtctttttggcaggatgagtttgtctttctacttagtagcaaggcaggtggctgtgggcttaatttggttggtggaaatcgattgattctctttgatcccgattggaaccctgccaatgataagcaggtcaatgtctctgcatctctgcttcatcaccttgtgaaggttcttgtaactccaaaccttgtctggtctgacctgttttcatctatcgccattttacaaaggctgctgctagagtatggagagatggacaaaaaaagagagtgtacatatacaggttcttaagcacaggaaccattgaggagaaggttgccagtgaatcttatacttccagatattgttcgctttttttttaattgtccaatggaagaatgctgagtttctagctactttcttgtgctgacattcgtatataggtatatcagcgtcagatgtcgaaagaaggtctccaaaaagttattcagcaggaacaagcagatggcaaaatgcaggtttatctgtttggactgattatttgctttctttaattctttttagtgttaagtctactgtattcaaatcttctttaacaggggagttctctttcaacagaagatctgcgtgatctttttaccttccatgaacaaatcaggtgaattatgttcatttgaattgtgggactctttaatttcttgtttccgggctttatttatgttcatattttgagaacttattgctagtatgaaggcattaatgaaagcatcccataaaccaacggaaccatataacacatgataaaattggatatacctggtggataattgagtgaactggttgggaaaaagaaattagaattgttctcttttctgagtaaccatcaaccaatgcacattttttatcaactcaatttttcatttatttggagaatattgtggtgtcagctgccagtcttagacagttatacgtatgtactactattagcatcactttcacagacaattgtttttaagatcaagaatgctgcaatattagtatgtaaaaagttgggcattgtcaatttcattcattatctcacgaccatttcttccctttacagagggggcatttttttttctgtagataatatggcagcaactataaaaaagcctgcctaaaatgttcaattttgaagctgcaagtatcaattgtttcattaccttaatataaatgcagtaccatagctgatattctgtgtcatattgtttcttacttttttttgtggggatttcttactttcatttggtgacgcaggtctgaaatacatgaaaatttgaagtgcaatcgctgtaacaaggatggatgtatggttctcgatggtagcaaatttgattcagcagccactgagcatgaggcttctaactcaggagagaacagttacattgatattggtggatttggagcgatctctggatgtgtgcagaaaatgaatagttcgaatcaacaggtagtccgtgacaccctttttatttttaatctaattaatactgtagttggctagctgcttcaaaacttttaatctaattagagtaaatttcacaaaactacacgttttgtggtccaagttgcagaaaaccacatacattttgacacttggcacttaagtacatatattttggttgtgtagtttcacaaaaccacactatcgatgaattgattcactcgcgagatgacgtggatgtttcacctaggacgaggacatggcatcctattactagccatcacacgaaattaataggatgccacgtccccatcctagatggaacaaccacatcatctcatgggtgaatccattcatcaatagtgtggttttgtgaaactaaactactaaaatatatgtacttaattgccaagtgtcaaaatgtgtgtggttttctgcaacttgaaccataaaacatgtagttttgtgaaatttactcatctaattaatactgtagttggctagctgcttcaaaactcagggttacatccttttcagattggaagtccttctgaagaagatttaggaagttggggccatcattctgatccatcaactgtacctgatactatactccagtgttcttctggtgatgaggtgatgtcctcaatgcatttgcatcttacatcttatctatagaaaagttcaatttcatacttgtcccccataataagtttctccctcttccacttgttcatttttagttttttactatcttcattatatttacatgataaaacagaaaagaaagagggttgggggcgggggggggggggggggggtggtgggatttatatatgctgctccaaagtgcctcttggcagaatggcagcccatccactattcaccatccaccattgtatcatatgatagatctcaaagtaacactccttgcctatgaagtgacagctctgacatgtctgtgcacgctgtgtgtattagctggtccaccacagtcgttccaaacttagcagttcataataggccaagataaggatgaaaaattacatatttgaatttgccaaatgtcctatctcaagcttgcaggactaggtttagcttgaaaatagagtaatttgaacctagcagattggtagtaatggatgagggaagactccatatggatgagtaaggaggaaggggcgttatgttcttgaattatccataatttaatttttcaaagagtggtcactatctagtgccatttcttgaggaaaaaacttgactgtcatgtattaacagcattcaatatgaactggcacatatctaaatttctaaagaagaaaatgcttgcctgcgaagctgtccttttagcagttaaataacctttatctgatatcaaggattttttttttgaaatatagagtttgattttcaagaaattctggcaactgttaacaaatggcatgcacttttgcaggtttcttttgttttcacaaatcagatcgatgggaaacttgttccagttgaatctatggcgcgagctgcaactcatcgaacacatgaagtgactgttaatgcagaaaaagaagtgggaaaaatcaattcttctaatgtacctggaaccgaacggcaatctctacttggaaaaaatctgaagatgatgggattcaatttaaagaattcgtctatgaaattcccaactaagtccagaagaatgctgccaaactgtttgcaagggatgaacaaaaccagcacatcttcagatcatcaacaaactaaaaagcttcatgttatttctgatgcgtctgatgatgattttgtatga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0762800, RefSeq:Os02g0762800