Difference between revisions of "Os02g0816300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0816300| Description = Armadillo-like helical domain containing protein| Version = NM_001055046.1 GI:115449620 GeneID:4331138| Length = 768...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0816300|
 
GeneName = Os02g0816300|

Revision as of 19:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0816300

Description

Armadillo-like helical domain containing protein

Version

NM_001055046.1 GI:115449620 GeneID:4331138

Length

7683 bp

Definition

Oryza sativa Japonica Group Os02g0816300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35869036..35876718

Sequence Coding Region

35869038..35869203,35870011..35870172,35870276..35870373,35870613..35870687,35870781..35870849
,35870920..35871005,35871078..35871195,35871769..35871867,35871943..35872270
,35872363..35874050,35874190..35874249,35874461..35874565,35874666..35874740
,35874832..35874900,35874982..35875050,35875362..35875463,35876206..35876355

Expression

GEO Profiles:Os02g0816300

Genome Context

<gbrowseImage1> name=NC_008395:35869036..35876718 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35869036..35876718 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggagatgaatgcaaggatgggaaatggagaaaaaaccccatgcatatcagatgtccaagacaaccgatgtatgacaatacaaattgaaccaacggataccaatcaagcaaagaaaagtcccaaagtgaagattgttacaagagatgcctcacttcttgcaggagatggagatattacaagaaaatcgcttggaccaataaaggtattctctgagaaggacctatcaagagaaatagaaagagtagcatctactttacatccagataatgaatgggcaatacgaataactgcaatgcaaagagtggaaggcttagttctcggaggtgctgccgactattcagccttccctatgctcctaaagcagcttgtgaccccactcataacccagattctggataggagatcaagtgttgtgaaacaggcatgccatttgctaaatttcttatcaaaagaactgctacgtgactttgaaccgtgcgctgaactgcttattccggtccttcttaagaatgttgtgatcactattcatgtaattgctgagtcctcggataattgtataaaagagatgctgcggaactgcaaagtagctcgtattctaccaaaaattattgaatttgcaaagaatgataaaagtgcagttctccgtgccaggtgttgtgagtacgcaatattgatgttggagttatgggttgatactccagaaatacagagatcagttgatctgtatgaagaattcataaaatgttgtatagaagatgcaactagtgaggtccgatcaagtgctagagcatgctacagaatgttttcaaggatttggcctgaacgttcgcatcagttgttttcatcgtttgaatcatccaggcagaaaatgataaatgatgaagatgctgagacacagcaaaggcatctttctcctgtagaaagagttaaattgatgcagcctcaatctagttcttgtaattcaactgaaattgacaaagttgtcaaggtcgattctggaacatcgttttcttctgtagaccttcaatcagtacaagtgaaagcatccgttcagcatgatgatatgacctcaaaaattcagcctgaaggcaaaactgatggcactacaactactggaagttcatttaaagataccagtacgttagaaaaagaaacaagcccagacaaaggccctgatcctgataaatgtgattcaggtgtcaatttatcatcttgtgatccatcctctgccactcaatttatactagaacctacttcagaattgctaccgtctgatgcaactgttgtaacaattgttcaagacaaggctgaatgcaggccaaatactgaacagctgactcagcaagttcaagttttgggacatccttctgatctgctgaaccgttcacctcctgttagtttgaaagaatcaggaaactcgctgaaacataaccctattcaagtgaactttgatggtagctcaggtggaaaactaggagctcagaaagtgaagcatcatactagcgctcctaataagagtgttgttcgtaaggagccgcggaacaattacattcccaacttccggcgtcctctcttgagtaagcagatgacaaactggttttatgccagtaacagaagtgatttagatgacaagcaactcattttgggtgaaatggtcagcaacatggatgtgccctcctctctcaccgaggcactttctttgggtcttaaaccaaagtcagattggatgatgagggtatacgcattcaatttcttaagacaatctttgctagagcagggaccaagaggcattcaggaggttgcacaaaattttgacaaggttatgaggtttgttagtcgttacctggctgatcctcatcataaaatagcacaggctgctctctcatcactttcagagatcatgccagtttttaagaagccttttgaacattatctggacaagactctgcctcatgttttctctcagctgaatgatccaaaggaatccatcaagcagcagtgctcagcaattttgaaacttgcaggtgaaatctattccattgattcgctcttaccggccctacttcgtacactagaagaacagaaatctcccaagtcaaaattggcaattattgagtttgcaaactcttcttttgtaaaatgcacagtcagttctgacaactattctagcagcagcttccttaagccatggcttgaaaagctagctcttttgttcaaggacaaaaacagtaagctaaaagaggttagcgttgctggtttctcatcaatctattctcactacgatcctgcatctttgttaagctttctagttagcttgtcaatggaagaacaaaagagattaagacgggcaataaagcagttgatccctacaatagagagcgacttggaagagtttttgcaacaaaggaaacataagccaaaggtgccactatttgattcttttgttggtgcatatcaaccttatgctaaaggtttagtcataaagcaaaataagcaccatctgcatgccacatatcagtctgattgccttcaggctgatgatgtgttcgattctgcactccactgtctcccaagaatttctttggaagttcgtgagcgacgcgctgggaaaattgaatctgaatcttacgatgaatctaatggtcatgatgctgaaatgatggacaagaaatctagtgatacaaggtcgagtgacccccctagaacatttgattataatgtgatatcagataacacagttgagagtccaagaaaagagggtactgacatcaagagatttgaggaatcaaacgagagtgaactgaacataactgtcagaaataggaatgtcatattgaatagctgtcaagatcatggaccaagcatttccaggacatatcatcaggatgaaatgagtcaaatggaagaagttccagagataaatggcccttccgtgtcaatcaagaatttacaacagatgtcctcttctctacttgagatgcttgatgatccagaggaatccaccagagagcttgcacttactctattggttgaaattcttgaaaagcaacgaaaggcaatggagaactgtatcgatactcttatagttaaattgctgcatgcaaccaaagatgctgccttgaaggttgtaaatcaagcccatatctgtttgacaacggtggttactcaatttgatccgctgacatgcctaagagcaattgcttctcagttggccaaccaggatgaaaaagttcttattgtcagcatcaacagtttgagcaagcttgttattcgattatcacaggacaatcttatggcacatttgtcgatatttcttcctgcactcctggacgccttcgaaaaccatagtccatatgtccgcaaggctgtggtgttgtgcttggtggatacgtacctgaagctcgggccagcgttcttgccgtatttggagaggctggacagcgcccagctgcagctggtaaccacgtacgccagcaggctgtcccagacgagctttattgctgtggacgcttga</cdnaseq>

Protein Sequence

<aaseq>MKEMNARMGNGEKTPCISDVQDNRCMTIQIEPTDTNQAKKSPKV KIVTRDASLLAGDGDITRKSLGPIKVFSEKDLSREIERVASTLHPDNEWAIRITAMQR VEGLVLGGAADYSAFPMLLKQLVTPLITQILDRRSSVVKQACHLLNFLSKELLRDFEP CAELLIPVLLKNVVITIHVIAESSDNCIKEMLRNCKVARILPKIIEFAKNDKSAVLRA RCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIEDATSEVRSSARACYRMFSRIWPE RSHQLFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQPQSSSCNSTEIDKVVKVDS GTSFSSVDLQSVQVKASVQHDDMTSKIQPEGKTDGTTTTGSSFKDTSTLEKETSPDKG PDPDKCDSGVNLSSCDPSSATQFILEPTSELLPSDATVVTIVQDKAECRPNTEQLTQQ VQVLGHPSDLLNRSPPVSLKESGNSLKHNPIQVNFDGSSGGKLGAQKVKHHTSAPNKS VVRKEPRNNYIPNFRRPLLSKQMTNWFYASNRSDLDDKQLILGEMVSNMDVPSSLTEA LSLGLKPKSDWMMRVYAFNFLRQSLLEQGPRGIQEVAQNFDKVMRFVSRYLADPHHKI AQAALSSLSEIMPVFKKPFEHYLDKTLPHVFSQLNDPKESIKQQCSAILKLAGEIYSI DSLLPALLRTLEEQKSPKSKLAIIEFANSSFVKCTVSSDNYSSSSFLKPWLEKLALLF KDKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQKRLRRAIKQLIPTIESDLE EFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSDCLQADDVFDSALH CLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDYNVISDNT VESPRKEGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEEV PEINGPSVSIKNLQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAMENCIDTLI VKLLHATKDAALKVVNQAHICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINSLS KLVIRLSQDNLMAHLSIFLPALLDAFENHSPYVRKAVVLCLVDTYLKLGPAFLPYLER LDSAQLQLVTTYASRLSQTSFIAVDA</aaseq>

Gene Sequence

<dnaseqindica>3..168#976..1137#1241..1338#1578..1652#1746..1814#1885..1970#2043..2160#2734..2832#2908..3235#3328..5015#5155..5214#5426..5530#5631..5705#5797..5865#5947..6015#6327..6428#7171..7320#agatgaaggagatgaatgcaaggatgggaaatggagaaaaaaccccatgcatatcagatgtccaagacaaccgatgtatgacaatacaaattgaaccaacggataccaatcaagcaaagaaaagtcccaaagtgaagattgttacaagagatgcctcacttcttgcaggtactatgagagaactcagggattcaaacctaaagaatgtgaattgctgtttcagtttcctttctttttagaccaatatcacactaaacttgttcttataaattacaatgtgaaatacttgtatccaattcagcatgtttttccacaattgtttgttctcagataagtttcaacatcaacaatgtaatccaatatacttgataggcaaaagcgtcccaaaactatttacttttttttgtaagaagtcaattaatttggtcttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgctaactgaccaaatgggtcatgagctcatgattgcatttttttcatcaaaataaaattagtggtgcaaataatcttaaattatctgtgaaaatgcatggcatcatctaacagcattttataacatatataaagttaaaagtgaaacaattgttagaatggtttgacccgcacaattttttatccctcaatttccaatcgagaacttgtttttatatgatcaactcaggcctgctggtcaagatgctcttcttgccactaactaatcttagcccaataggtgataataggctaagagcaagcagtgctggtttttagaaccatagatacctcaactgaacaatggagttctggttacctgttattctattatgcatcctggactctgatttttctgttctgttttcttcacattctttgatcttaccaaagctatccctgatcattgggaatttgggatgcgatctgtccatccatatttggtacaggagatggagatattacaagaaaatcgcttggaccaataaaggtattctctgagaaggacctatcaagagaaatagaaagagtagcatctactttacatccagataatgaatgggcaatacgaataactgcaatgcaaagagtggaaggcttagttctcggaggttgtaattcctgcacatttctgtttgtattgatcactatcattgtacacattgggtaagttgaagatttttgtgatttttgtctaatagtaatttgtgccaggtgctgccgactattcagccttccctatgctcctaaagcagcttgtgaccccactcataacccagattctggataggagatcaagtgttgtgaaacaggtctggatgtttagtttgttcgtctttgtaataatgcaacctatttcactgtttgagataagagaatgttgcttgtatgtactgcaaaccatatagttcccatagatgtactgtaggcaaaccaaaaatagatatattgacttggtgagcgactgcctttaaacctttggtattgaacagaccatctttcaatcatattttgggcgctcattaatccaagtgttttccaatatttacaggcatgccatttgctaaatttcttatcaaaagaactgctacgtgactttgaaccgtgcgctgaactgcttattccggtatgttgctaacctatttttacatctgttggaagttaacagtatcatcctggatacttctaaaatgacctcgttaccatcttatatttgtaggtccttcttaagaatgttgtgatcactattcatgtaattgctgagtcctcggataattgtataaaagaggtaatataccgaagaaattttgttttccatttgatttcatcatttttatgttcattacttccaaatacagatgctgcggaactgcaaagtagctcgtattctaccaaaaattattgaatttgcaaagaatgataaaagtgcagttctccgtgccaggtaagagaaacacaatattatagtatagctataatcttggatgaatgattaaaaaggcatttgctgttgtaggtgttgtgagtacgcaatattgatgttggagttatgggttgatactccagaaatacagagatcagttgatctgtatgaagaattcataaaatgttgtatagaagatgcaactagtgaggtatttatacggcacgattatttgaaatgtatgaaaggcacttacacatttcttccttatcttttccatcctccttttacctttgcagaaactttttagtggattttctttgcgttatatatcacatatatttagttaaatgtactgtacacctcaaatgcataactactagccatgaattaagtatcttttcgttattaccaaaaaaaataaaaatacataccacattgcgatgacaaaaggattgaaaggaaaaccaggaaaaataaaaggtataatgtaatttttagccactgtataagataaaatacctgcataaaaatagtgatttttccagtttcttaaaaaaaagggtaatctggaacattggtcctggaaattttttcaagaacacatctcaacctttgattatggttaaggccataatttaggcagatggttcactatatttcactaaacacttacatttttgtgcactgcattgcacttaaactagtggtcctgtgtggatgttcttttaatgttcatcttgatgacttaatcagagatttacactgattttccaattcgaaggtccgatcaagtgctagagcatgctacagaatgttttcaaggatttggcctgaacgttcgcatcagttgttttcatcgtttgaatcatccaggcagaaagtatatcctcagatttaactgatatatttacctaatttgttctataatttaacattattttgttgaattgcatagatgataaatgatgaagatgctgagacacagcaaaggcatctttctcctgtagaaagagttaaattgatgcagcctcaatctagttcttgtaattcaactgaaattgacaaagttgtcaaggtcgattctggaacatcgttttcttctgtagaccttcaatcagtacaagtgaaagcatccgttcagcatgatgatatgacctcaaaaattcagcctgaaggcaaaactgatggcactacaactactggaagttcatttaaagataccagtacgttagaaaaagaaacaagcccagacaaaggccctgatcctgataaatgtgattcaggtatatgtcatgcagaaataatttatttatattttatctgctagcaaatcaggatccattgaccaagtaattgaatccagccaatactgcaggtgtcaatttatcatcttgtgatccatcctctgccactcaatttatactagaacctacttcagaattgctaccgtctgatgcaactgttgtaacaattgttcaagacaaggctgaatgcaggccaaatactgaacagctgactcagcaagttcaagttttgggacatccttctgatctgctgaaccgttcacctcctgttagtttgaaagaatcaggaaactcgctgaaacataaccctattcaagtgaactttgatggtagctcaggtggaaaactaggagctcagaaagtgaagcatcatactagcgctcctaataagagtgttgttcgtaaggagccgcggaacaattacattcccaacttccggcgtcctctcttgagtaagcagatgacaaactggttttatgccagtaacagaagtgatttagatgacaagcaactcattttgggtgaaatggtcagcaacatggatgtgccctcctctctcaccgaggcactttctttgggtcttaaaccaaagtcagattggatgatgagggtatacgcattcaatttcttaagacaatctttgctagagcagggaccaagaggcattcaggaggttgcacaaaattttgacaaggttatgaggtttgttagtcgttacctggctgatcctcatcataaaatagcacaggctgctctctcatcactttcagagatcatgccagtttttaagaagccttttgaacattatctggacaagactctgcctcatgttttctctcagctgaatgatccaaaggaatccatcaagcagcagtgctcagcaattttgaaacttgcaggtgaaatctattccattgattcgctcttaccggccctacttcgtacactagaagaacagaaatctcccaagtcaaaattggcaattattgagtttgcaaactcttcttttgtaaaatgcacagtcagttctgacaactattctagcagcagcttccttaagccatggcttgaaaagctagctcttttgttcaaggacaaaaacagtaagctaaaagaggttagcgttgctggtttctcatcaatctattctcactacgatcctgcatctttgttaagctttctagttagcttgtcaatggaagaacaaaagagattaagacgggcaataaagcagttgatccctacaatagagagcgacttggaagagtttttgcaacaaaggaaacataagccaaaggtgccactatttgattcttttgttggtgcatatcaaccttatgctaaaggtttagtcataaagcaaaataagcaccatctgcatgccacatatcagtctgattgccttcaggctgatgatgtgttcgattctgcactccactgtctcccaagaatttctttggaagttcgtgagcgacgcgctgggaaaattgaatctgaatcttacgatgaatctaatggtcatgatgctgaaatgatggacaagaaatctagtgatacaaggtcgagtgacccccctagaacatttgattataatgtgatatcagataacacagttgagagtccaagaaaagagggtactgacatcaagagatttgaggaatcaaacgagagtgaactgaacataactgtcagaaataggaatgtcatattgaatagctgtcaagatcatggaccaagcatttccaggacatatcatcaggtttctaactacttgattgacccgcctaatgttttgtctgatcattgttttttttagattattcccatttcggtcagtctattttcttttgtggtttctattatacagtatgatcacatatattatttttgataaacaggatgaaatgagtcaaatggaagaagttccagagataaatggcccttccgtgtcaatcaaggttagataaggcttcgatctgaagctttaagtggcattgtcctgtaattagtcctgctgtcttttttctagggaatatgcaaaatgcttccgtactattgcattgagatagaaagccttttgcaaaatgatctaactatacatagggtataggcattagatccagcaacctgagaaaaaaaagtattctttttaactagttcccttttcagaatttacaacagatgtcctcttctctacttgagatgcttgatgatccagaggaatccaccagagagcttgcacttactctattggttgaaattcttgaaaagcaagtaagtgtttctgaagttatttaagagtgtgttcttggtgtggcatcatttaaatgccatcttccatgaaaatgacatttgtcatggccatgtaatccagcgaaaggcaatggagaactgtatcgatactcttatagttaaattgctgcatgcaaccaaagatgctgccttgaaggtactgcactgacagtgttcttttcagcttgcagttcttgatgccataaagttattgccctctcaagccttttatgacattgtcattgcaggttgtaaatcaagcccatatctgtttgacaacggtggttactcaatttgatccgctgacatgcctaagagtatgtattatttgtctttgggatattttattttcccttttgtagtagttggtatcttaagtgtttaatccaaataagcaggcaattgcttctcagttggccaaccaggatgaaaaagttcttattgtcagcatcaacagtttgagcaaggtactcctaaccccaagactgcagttgatatatgtcaatctttttttttaaaaaaaaggaaagatatatgtcaatcttgtgtatggtaaaatggcgagttcagttctaacaatattttggtactaggctagtaggctaaaccatcaaattatatggtgaaagagcacatgtttaatcctgcatttcgttatctgtggattatgactttcttgtttacctccacttttgtgatatcatattagttgagtgagctatgtacgcaatttttcttctctttgttgctaattctcgacttcttcctttatctgcagcttgttattcgattatcacaggacaatcttatggcacatttgtcgatatttcttcctgcactcctggacgccttcgaaaaccatagtccatatgtccgcaaggtcattcattcccactaactctcacaaatcctgttttaagatcagatactatttctcataagtgaatctgaaaactttgttcttattattcttcacctttctcaaaattctggcatcaaagaggttatggcacaatcagaaatactttttttttaaaaaaaaatggaaatagattccacttcataatgagcgtagcccttgttcaactacattgacaaaaaaattcataagaagtacagctacaagcctgcaatgttgaggtgttgagcttgagcatctcccagtagagtttattcagaatccacgagcatgccatatcgatccttatatatgtttgtattagccccttcagttttatgggccagattccactttagtcttaactgatctcagcacagttcacgagtacttttgtatttggattcagtgggctgtgggcatcatgcggcgttgttcctttggaccttggattgtttgcaaggccttggctttgtaatgtcatttgtgcccccctgaatctgctttactatatttgtgctactcaacacagagatggatatattctccaagaaaaagcaaacaaaagaaagtagcatgaaacatgcaaacaagcaaagaattcattcatgcaccctgtactttccaattaagttcatatttcatcgagatttttttgtccacagctctatttgctacaagtagcagaatgctcatcatcctgtgtgctgccattatattgcaggctgtggtgttgtgcttggtggatacgtacctgaagctcgggccagcgttcttgccgtatttggagaggctggacagcgcccagctgcagctggtaaccacgtacgccagcaggctgtcccagacgagctttattgctgtggacgcttgatgcaggcaacccagcagcaacagcagcagcagcagaagacgcaatgcttgtttcaacgataactctccaccgttggttagccttagccttctctttctttttatttatggccatgtgtgcacaataagggcagcagctcagctctctccccctttctccaaatttatgagcatagtagaatagatctctatactgtaaatcataattacctgtttttactacccagaaatgagatacatgcatgtaggcagtgcagattgtacaaccaatggaagaatagtagtactagcattttcatcctgtttgctacagcttatgtgatctaaaggaaaggaagaaaaaaatataatgggtgtgcagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0816300, RefSeq:Os02g0816300