Difference between revisions of "Os02g0826100"

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(Created page with "{{JaponicaGene| GeneName = Os02g0826100| Description = Similar to RNA helicase (Fragment)| Version = NM_001055119.1 GI:115449920 GeneID:4331214| Length = 4960 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0826100|
 
GeneName = Os02g0826100|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0826100

Description

Similar to RNA helicase (Fragment)

Version

NM_001055119.1 GI:115449920 GeneID:4331214

Length

4960 bp

Definition

Oryza sativa Japonica Group Os02g0826100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36388944..36393903

Sequence Coding Region

36389101..36389331,36390064..36390246,36390408..36390623,36390705..36390800,36391304..36391390
,36391493..36391699,36391794..36392018,36392111..36392166,36392377..36392483
,36392811..36393838

Expression

GEO Profiles:Os02g0826100

Genome Context

<gbrowseImage1> name=NC_008395:36388944..36393903 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36388944..36393903 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggggcgggccgaggacgttcccgggcgggctgtcgaagtggcagcacaagcggatgcacgagaagctcgcgaggcacaaggagcgggggctcctccgccacgagaagcagctctacctcgcccgcctccgctccgagatccgcgcctcccgcctgcccgccgccggcgcctcccctcccgacgacggcgacgggcccacctcctcgcgcgcccacatccgcgccctcgccgaccgcttcctcttgcccggcgccgaggatctctggaacgaagacgacgggcccatccaccgcgccgaccggccgcggccgccgaggaggatcgtctccgttggcgggaatggcggcgaccgccgtaagttggactctacaaagcaggagctaccgaggggtgggaaggagccgcgtctggctgcgttcaatcctaggagggatttccagacggccgcgccctggtggtggcaatggagctcgtcttccgccattccttcgcgaacaaaggaggcatccttctgtttcttcggtcccaagagatcctactcagtgatgcctctgttccaggcgcatcaggagtccagtggtacatcgatggtgccgctgattgctagaggtcttgccagtgctcggattgctccctcgcagttgaatggagagaggttctactcgttcgcagcagggcgatttggcaggaaattgaggccagactcctcagatgaggatgatgaggatatatcaactgcgaagaaggatatgaggtttgcgaggtttggagcatccagtgaggaggaatcaggatacgatgaattggaggcgagaagtgccatcaggaagaaatggagcagtgctgctttgaggaactgtgatatgaagaaggagaggagagcgctcaagtcctatgaggaagaaaacaacgatctcgctggtagcttccgagagctgcgagaggagataaagaacagggaagtgttgggtgctgagcggaggcgttacgagtcgaggggcgaatctttgtttaccaataaaagatttgaggaatgtggtatctctcccctaacagtaaaagcactcactgatgctggatatgtacagactaccgttgtgcaggaaacagcacttcctatgtgtcttgaaggcaaagatgttcttgtcaaggctaaaactggaactggcaaaagtgcagcttttctgctccctgcaattgaatcagtcttgaatgctatgaagagccatacaaatcatcgagtgtctccaatattttcgcttatcctttgccctacaagagagcttgccatccagctcacagctgaggcaaatgttctgttgaagtaccatcaaggaattggtgttcaatctcttattggtggcactagattcaagctagatcaaagacgtttagaatctgatccatgccagattttagttgctacacctggtagactgctcgatcacattgagaacaaatcttcattctctgttcgcttgatgggattgaagttgcttgtattggatgaagctgatcatttgctagatttgggtttccgtacagacattgaaaagattgttgatagtttgccacgtcaaagacagacactactattttctgctacaatcccaaaggaggttcgaagggtttcacagctagttttaaaaagggatcatgtttttgttgatacagtgggcttgggagctgttgaaactcctactaaggtggagcagttgtatctcgttatgccacatgagctgcattttcatatggtttatcgccttctccgagaacatattgatcaggaagtggactataaggtgattgttttctgcacaactgccatggtgactgaatttatgtatataatgcttcgagatttgaagctaaatgtccgagaaatccattcaagaaagcctcagctctatagaactcggatatcagaagaatttcgagattctagtcgcttgattctggtgacctcagatgtttcaacacgtggagtgaattatccaggtgtcaccttagtcattcaggttggtgttccttcagatagagagcactacatccatcgacttggaaggaccggaagagaaggtaaatctggtaaagggattcttttgcttgcgccatgggaagagtatttcttaaatgagatacatgatctcccggtgcagaagtctcaaacaccaaacattgacgaggagatgaaacgaaaggttgatggttcaataaagatagttgatatgagcatcaaggaggcagcatatcacgcatggcttggctactacaattcaataggtgatgttggaagagacaagaccatgcttgttgacctagcgaacaggttctgtaaatccatcggtttggaaaagcctccagcactgtacaggaaaactgctctgaagatgggccttaaggatgtacctgggattcgaatcaggaaatag</cdnaseq>

Protein Sequence

<aaseq>MGGGPRTFPGGLSKWQHKRMHEKLARHKERGLLRHEKQLYLARL RSEIRASRLPAAGASPPDDGDGPTSSRAHIRALADRFLLPGAEDLWNEDDGPIHRADR PRPPRRIVSVGGNGGDRRKLDSTKQELPRGGKEPRLAAFNPRRDFQTAAPWWWQWSSS SAIPSRTKEASFCFFGPKRSYSVMPLFQAHQESSGTSMVPLIARGLASARIAPSQLNG ERFYSFAAGRFGRKLRPDSSDEDDEDISTAKKDMRFARFGASSEEESGYDELEARSAI RKKWSSAALRNCDMKKERRALKSYEEENNDLAGSFRELREEIKNREVLGAERRRYESR GESLFTNKRFEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGK SAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGV QSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADH LLDLGFRTDIEKIVDSLPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVE TPTKVEQLYLVMPHELHFHMVYRLLREHIDQEVDYKVIVFCTTAMVTEFMYIMLRDLK LNVREIHSRKPQLYRTRISEEFRDSSRLILVTSDVSTRGVNYPGVTLVIQVGVPSDRE HYIHRLGRTGREGKSGKGILLLAPWEEYFLNEIHDLPVQKSQTPNIDEEMKRKVDGSI KIVDMSIKEAAYHAWLGYYNSIGDVGRDKTMLVDLANRFCKSIGLEKPPALYRKTALK MGLKDVPGIRIRK</aaseq>

Gene Sequence

<dnaseqindica>4573..4803#3658..3840#3281..3496#3104..3199#2514..2600#2205..2411#1886..2110#1738..1793#1421..1527#66..1093#gagtgataattgattgataaaccctactgcttctcgccgccgccgccgacgaggacgccggtgggatggggggcgggccgaggacgttcccgggcgggctgtcgaagtggcagcacaagcggatgcacgagaagctcgcgaggcacaaggagcgggggctcctccgccacgagaagcagctctacctcgcccgcctccgctccgagatccgcgcctcccgcctgcccgccgccggcgcctcccctcccgacgacggcgacgggcccacctcctcgcgcgcccacatccgcgccctcgccgaccgcttcctcttgcccggcgccgaggatctctggaacgaagacgacgggcccatccaccgcgccgaccggccgcggccgccgaggaggatcgtctccgttggcgggaatggcggcgaccgccgtaagttggactctacaaagcaggagctaccgaggggtgggaaggagccgcgtctggctgcgttcaatcctaggagggatttccagacggccgcgccctggtggtggcaatggagctcgtcttccgccattccttcgcgaacaaaggaggcatccttctgtttcttcggtcccaagagatcctactcagtgatgcctctgttccaggcgcatcaggagtccagtggtacatcgatggtgccgctgattgctagaggtcttgccagtgctcggattgctccctcgcagttgaatggagagaggttctactcgttcgcagcagggcgatttggcaggaaattgaggccagactcctcagatgaggatgatgaggatatatcaactgcgaagaaggatatgaggtttgcgaggtttggagcatccagtgaggaggaatcaggatacgatgaattggaggcgagaagtgccatcaggaagaaatggagcagtgctgctttgaggaactgtgatatgaagaaggagaggagagcgctcaagtcctatgaggaagaaaacaacgatctcgctggtagcttccgagagctgcgagaggagataaagaacagggaagtgttgggtgctgagcggaggcgttacgagtcgaggggcgaatctttgtttaccaataaaaggttacactttagtttaccttctattgctgcctatttgctcatgtagttttgatttatttgttctggagcttattagctttagaacatcatatatgtattgttattatgaacttttaggcaaaacaacaaaagaatttgaaacataccgatcatggtatatgaactaagaagttgctacacatagtcttcttggagtttcattttttatggcactgatctacagcaagaattaaccataataaatagagagtgtattcctcctagcatgctccgaaacagagatacttactatgtgattaataagccctattgtttcgttgacatcagatttgaggaatgtggtatctctcccctaacagtaaaagcactcactgatgctggatatgtacagactaccgttgtgcaggaaacagcacttcctatgtgtcttgaaggtactttctttttttattttcattcgaatatgtgctactaacaacacaagtttatactgaccatgttactcacttcagtagttccacacatactacttagcagttagcaccttgtggcaccattttatcttttgatttatctgaacatgttaccactgaaaccttcaacaatcaagaggttgcccctcactcatcactgtatgcatccaggcaaagatgttcttgtcaaggctaaaactggaactggcaaaagtgcagcttttctggtaatactattttgcaaggagatactttgagatgtttagtttttattgttggttccttcaaccaatttattcataaatgtattgataaacagctccctgcaattgaatcagtcttgaatgctatgaagagccatacaaatcatcgagtgtctccaatattttcgcttatcctttgccctacaagagagcttgccatccagctcacagctgaggcaaatgttctgttgaagtaccatcaaggaattggtgttcaatctcttattggtggcactagattcaagctagatcaaagacgtttagaatctgatccatgccaggtttgtaatgtttactgacctactatagatcaaggtaatagctgctgatgtttgtcgtttgtctgaactatatcttgtgttttcccccttgaagattttagttgctacacctggtagactgctcgatcacattgagaacaaatcttcattctctgttcgcttgatgggattgaagttgcttgtattggatgaagctgatcatttgctagatttgggtttccgtacagacattgaaaagattgttgatagtttgccacgtcaaagacagacactactattttctgctacaatcccaaaggaggtactgtgatcagcatgggcaaaagcactagtattctgtaaatttttgtctatctatttctgtattgattgacaaccacatgtctgaatttgccaatgacaggttcgaagggtttcacagctagttttaaaaagggatcatgtttttgttgatacagtgggcttgggagctgttgaaactcctactaaggtctatactttccagttctactctagtatatttagtactgcatatcaacttaatcttcgatttttctcatctgcaatgtgctcattttttctgactcctgcaagtacagaaatgtgatgtgatcaattttcttggtttgcattacctagagcatctgttagcatttattttaatgtgccaattaaaagaggtcccattgcattattgcatctatggaagggacttccattagctctgcattgttcagcacttttgctttccatggatacacatacagacattcacataaacagatatcctagaccatacgtctttcttgccattgtgtcgaccatttggatatttgatacatttgtacactttgtataacatataaactatatttctaatgatttttagctcaaaagtaaaatattgctgcgtagtctctttttatcttctcccatggaaataatttttcagttgcttactgatcccttgatatgtggttttcttgagcttaggtggagcagttgtatctcgttatgccacatgagctgcattttcatatggtttatcgccttctccgagaacatattgatcaggaagtggactataaggtgctctcatccctctcttttgaccagacaattgattaagaattaaaatatgataaacttacttagcctttctcattccaggtgattgttttctgcacaactgccatggtgactgaatttatgtatataatgcttcgagatttgaagctaaatgtccgagaaatccattcaagaaagcctcagctctatagaactcggatatcagaagaatttcgagattctagtcgcttgattctggtgacctcagatgtttcaacacgtggagtgaattatccaggtgtcaccttagtcattcaggtagtcttttttcttttaaaaatgtagttgtgaaagttcaggacagaattgctactttgctgaagcaaaagcaactgctgtagtggacctctctgcagctgattgtatggctgcttcttcactgcaattactattttaacatatatactattttggtttaggttggtgttccttcagatagagagcactacatccatcgacttggaaggaccggaagagaaggtaaatctggtaaagggattcttttgcttgcgccatgggaagagtatttcttaaatgagatacatgatctcccggtgcagaagtctcaaacaccaaacattgacgaggagatgaaacgaaaggttcgaatgagctaattttaacttgtctattctgttagtgcagcatgagctagcatattatcagagctagatattattaaatcactactgctactcgggcatacaagtcttgtaccccgccaaatttgctactttgaggctgaactactgataggtgatagctagtttaagctcctctttttctctttgtttgctttgatacgttcttttggaggaatatttttcttacttttgcacaaaataaccagcattcctagcactattgcttttgtcatgtttcgtttttgcagactgcattagcctccatgccatattgtttactgtctttgatacgattcgttgtatttaggttgaatgagtagagacgtactatggtgttcaaaaaacagttgatgtgagcctggcactaattagcctgggacttatatatcgcttatggataggagtctaatctaaagattcataagttatagctaaatgctgttgcatagattttgcactaaccatgacatatgctatgaactataccattttagtttctgtttgaaccattgtttgtacgaataaccattttatcattttaaattccattctgttagtataaccattttacaccgtctatggggatttgagtaaatataagtaggacattttcccccctacagcggtgtgcattcgttgtcaattgtatctccagcttgaacgaacatgcatgttccatttgtaatgcaggttgatggttcaataaagatagttgatatgagcatcaaggaggcagcatatcacgcatggcttggctactacaattcaataggtgatgttggaagagacaagaccatgcttgttgacctagcgaacaggttctgtaaatccatcggtttggaaaagcctccagcactgtacaggaaaactgctctgaagatgggccttaaggatgtacctgggattcgaatcaggaaatagcaattgcatttctttccttttcttttactgaaagatggcagatagattgagtgagagagtagtagtatctgtgctgaacaattatggagtaatatatatttttaaaatttctgaaaggaggcaaagccctccgtataggatgtgtcaaattaaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0826100, RefSeq:Os02g0826100