Difference between revisions of "Os10g0457600"

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(Created page with "{{JaponicaGene| GeneName = Os10g0457600| Description = Similar to Acetyl-CoA C-acyltransferase (3-ketoacyl-coa thiolase b) (EC 2.3.1.16) (Fragment)| Version = NM_001071299....")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0457600|
 
GeneName = Os10g0457600|

Revision as of 21:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0457600

Description

Similar to Acetyl-CoA C-acyltransferase (3-ketoacyl-coa thiolase b) (EC 2.3.1.16) (Fragment)

Version

NM_001071299.1 GI:115482341 GeneID:4348804

Length

4150 bp

Definition

Oryza sativa Japonica Group Os10g0457600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:17232602..17236751

Sequence Coding Region

17232832..17232918,17233014..17233090,17234112..17234196,17234309..17234435,17234525..17234623
,17234721..17234788,17234892..17234999,17235105..17235182,17235299..17235431
,17235516..17235612,17235843..17235966,17236046..17236154,17236277..17236360
,17236449..17236558

Expression

GEO Profiles:Os10g0457600

Genome Context

<gbrowseImage1> name=NC_008403:17232602..17236751 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:17232602..17236751 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaggcgatcaacaggcagagggtgcttctcgcccacctggagcccgccgcgagtcccgccgccgccgcgccggccatcaccgcgagcgcgtgcgccgcgggggacagcgccgcgtaccaccgcggggcgtgcttcgcagacgacgtcgtcatcgtcgctgcctataggacagcaatttgcaagtccaagagaggtggtttcaaggatactcccgcagaggacctcttggttccagtattcaaggctttgatagataaaacgaagttgaacccaagtgaagttggtgatattgttgttggtactgttttagctcctgggtcccaaagggcaattgaatgcagaatggctgcattttatgctggattccctgataccgttcctcttatgactgtaaacaggcaatgttcgtctgggcttcaagcagttgcaaatgttgcttctaacattaaagcaggactttatgacattggtattgctgctggcctagagtccatgacagtgaaccaagttcgccttgatgggcaagtgaaccccaaagttgagctgttttctcaagcacgcgattgccttctcccaatgggcctcacgtccgagaatgttgcaaaacgatttggcataacacgaatggagcaagaccaggctgctgttgagtcccacaggaaggctgcggctgcagctgcttctggtaaattcaaggaagaaattgttccagttcacacgaagattgtggatccaaaaactggtgaggaaaaggagatagtggtctcggcagatgatggaatccgaccaggcacttcattggcagtcctgtcaaaactcaaaccagcattctctaaagatggcaccactactgctggaaacgctagccaagtaagcgatggtgctggagcagtcttactaatgagacgtgacattgctatgcaaaagggtcttccaatagttggcgtcttcaggagctttgcagcagttggagttgatccagctataatgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaatagatgatgttgaccttttcgagattaatgaggcctttgcatcacagtacgtatactgctgcaagaagttgggacttgatcctgcaaaagttaacgttaacggaggtgcaatggctcttgggcatccattgggtgctacaggtgcacggtctgtcagtacccttctcaacgaaatgaagcgacggggcaaagactgtcgatttggtgtgatttccatgtgcataggttctggcatgggggctgctgctgtctttgagcgtggggatgcagtggatgagctcactaatgctcggtgcatcccgacccataaccggctttcgaaggacgccatgtaa</cdnaseq>

Protein Sequence

<aaseq>MEKAINRQRVLLAHLEPAASPAAAAPAITASACAAGDSAAYHRG ACFADDVVIVAAYRTAICKSKRGGFKDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVG TVLAPGSQRAIECRMAAFYAGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGI AAGLESMTVNQVRLDGQVNPKVELFSQARDCLLPMGLTSENVAKRFGITRMEQDQAAV ESHRKAAAAAASGKFKEEIVPVHTKIVDPKTGEEKEIVVSADDGIRPGTSLAVLSKLK PAFSKDGTTTAGNASQVSDGAGAVLLMRRDIAMQKGLPIVGVFRSFAAVGVDPAIMGV GPAVAIPAAVKAAGLQIDDVDLFEINEAFASQYVYCCKKLGLDPAKVNVNGGAMALGH PLGATGARSVSTLLNEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDAVDELTNARCI PTHNRLSKDAM</aaseq>

Gene Sequence

<dnaseqindica>231..317#413..489#1511..1595#1708..1834#1924..2022#2120..2187#2291..2398#2504..2581#2698..2830#2915..3011#3242..3365#3445..3553#3676..3759#3848..3957#acatctcgcactcgcatcgcagctcccaactccaactcaagtgggctccttcttcccccacaactccacggaaaaaacctcgcagtacacggccacccaccacctaactcccttccttcctctccctagaaatattcccgcatccgcatcccgcatcccgcctggtttgtgattcgccgaacagctttgccgggagaaagcgaggaaggaaggaaggagaggagggagccatggagaaggcgatcaacaggcagagggtgcttctcgcccacctggagcccgccgcgagtcccgccgccgccgcgccggccatcaccgtgagtccacctaccgccgcgttccgccctggggtgtccagatctgcgcggcgtgctgatgtttttgattgttggttttggtttggttggtgcaggcgagcgcgtgcgccgcgggggacagcgccgcgtaccaccgcggggcgtgcttcgcagacgacgtcgtcatcgtcgcgtaagtgagatgtgtttccttccccccgcggcggttctgccctttggccatgccaatggcctggattttatagcttctgattatagataatttatttagatcggtgaaattgattcaagatggatggctgtttttgtgttgaccgtgttcttctcccggtcgatggttgtcgggtcaaatttagttatcagcttattacgaattaaacctggacgaaaatagtaaaggtctttcgaaaaatatctggacgaagaaaaaaacggaattgctatatttgtgtcgctacaattttgttcattttattgtcagatctcagaccatccattgctgctttgagatttgcctgttgcagttgattatcttcaaaattcatgctagtattcactttcacttggagattaaactattatcactcatggataaattactcatactaattacatcgtacttattgtaattttgggacttatattgtaaatacactaaaattacatatgtaatttaggaacttacaatgtaaatacatgccgactattttttggtgaaaaatatggcgtcttaaatatagctactccccccccccccccccccccgcggcaaaaaaaaaagctatgaaagttatgaataaaattgggctacttgtttccgctaatattttgaagaccgcatgttgaataaggagaatgatatataaacatgaaagttttagcattgccaacataggggaaaagggtgtcatagtctgatagccgttgtgtcatatggtctggattatataggatagttagctgccgtaagacaactcgtgttggcctagttttctttttctcgatgtaatttcattgctaaataaaatacccattatctaaaaacatatgaaaaagagagccaaaaaagctgtgaaaaacacatgtgattgttgcttggtttaccgttagattcagtggcaagtgatttttttccttatttgattatcataagtcataaatagaagtgaatcatgggtcttttgtgtcttcagtgcctataggacagcaatttgcaagtccaagagaggtggtttcaaggatactcccgcagaggacctcttggttccagtattcaaggtttgtatttgttatcatatactcattttctcccaacttgacaattagtgaactggttgcttctgtctcgacctttggtctcattctcatatattttgcctcccaactacaggctttgatagataaaacgaagttgaacccaagtgaagttggtgatattgttgttggtactgttttagctcctgggtcccaaagggcaattgaatgcagaatggctgcattttatgctggattccctggtaagagtcataataaacattatcatgtttgccattaatattggactgtcatcattctcaacttgattaatttgttttgtatgctccagataccgttcctcttatgactgtaaacaggcaatgttcgtctgggcttcaagcagttgcaaatgttgcttctaacattaaagcaggactttatgacattggtatgatccgctggtggttaatcttaagaagtcctttttgtgaggagaagtttgaaaaaaaaattcatggtgaactgacttttgttatttattcaaggtattgctgctggcctagagtccatgacagtgaaccaagttcgccttgatgggcaagtgaaccccaaagtatgtgaaacatgatggtcaatgcagcaagataatctttggatgcacgtgtaaagatatttgagcttgatttttttttggctgaaatctcccgctattttaggttgagctgttttctcaagcacgcgattgccttctcccaatgggcctcacgtccgagaatgttgcaaaacgatttggcataacacgaatggagcaagaccaggctgctgtaggttgccttatcaattctttctttggacatgtgtattgatacacagtgaagtgttgcacaatatgattctttcccttattattttcatatattgatgtttaggttgagtcccacaggaaggctgcggctgcagctgcttctggtaaattcaaggaagaaattgttccagttcacacgaaggtaatttagcagcttggttatcttcctaaaataactgtctgaactctttaatattattgttacatgatagtcttctgtttactgtgttatcctgacatgatcattgtgttgtgaagattgtggatccaaaaactggtgaggaaaaggagatagtggtctcggcagatgatggaatccgaccaggcacttcattggcagtcctgtcaaaactcaaaccagcattctctaaagatggcaccactactgctggtaacgtgtaatgaatgtttgttaggcacaactgttgattagttgtattcacctctaaagattagtgtttgttttaacccataggaaacgctagccaagtaagcgatggtgctggagcagtcttactaatgagacgtgacattgctatgcaaaagggtcttccaatagttggcgtcttcaggtattagtatttctctatgactctatatatcatatcttgggtcacaactcacatctataggcattgttttcagcctaattaaaaaagtaccaaagaacattaattttaagtttttaacaaggtggttcaatcttcccttcttagtcatgaaagcaaataggcatatggtacaactaactgtcgcaaaactttgttaagaaactcagcatgagctgaatgtggaaatgtaggagctttgcagcagttggagttgatccagctataatgggtgttggtcctgctgttgccatccctgcggcagtgaaagctgctggtcttcaaatagatgatgttgaccttttcgagattaatgaggtatactttcatccattcatcgagtttctccactagacaacagatctgccttgtaatatttatttgctcttgtacacaggcctttgcatcacagtacgtatactgctgcaagaagttgggacttgatcctgcaaaagttaacgttaacggaggtgcaatggctcttgggcatccattgggtgctacaggtattttcttgctgctatccttgatacttatcgtatagccaaactgttattttagtatcagtaatctataattaagcaaatgtgccaattgcaatgatatttctcatgtttcctcttggcaggtgcacggtctgtcagtacccttctcaacgaaatgaagcgacggggcaaagactgtcgatttggtgtgatttccatgtgcataggtacataaccatattccattggcctgcatgaaaattcaaaataattctttcagctgggagtaacttgacaagaacttctggtgaacaggttctggcatgggggctgctgctgtctttgagcgtggggatgcagtggatgagctcactaatgctcggtgcatcccgacccataaccggctttcgaaggacgccatgtaactagaactatatatatatgtcataaaaattgtgcaactgccactattgtttgaaatatcaacacaagagtagggaataaaacgcttgtgtatctgtaatctcatccagctctgaacttggctagttggagaatccttgttaattaggaaattcatgcataataactcaaaagttgtcccttgtcagcctgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0457600, RefSeq:Os10g0457600