Difference between revisions of "Os01g0159400"
(Created page with "{{JaponicaGene|
GeneName = Os01g0159400|
Description = Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) ...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0159400| | GeneName = Os01g0159400| | ||
Revision as of 18:44, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0159400 |
|---|---|
| Description |
Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) (G6p) (AtG6) |
| Version |
NM_001048619.1 GI:115434651 GeneID:4324062 |
| Length |
5824 bp |
| Definition |
Oryza sativa Japonica Group Os01g0159400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:3107117..3112940 |
| Sequence Coding Region |
3107668..3107796,3107879..3107971,3108082..3108253,3108341..3108417,3108514..3108673 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:3107117..3112940 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:3107117..3112940 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggggaagcaaggagatgggcgcgaggaggatggcgctaaggtcggcctcccggcgctggatatctcgctcgcgtttccgcaggccacgccggcatccatcttcccgccatcagcatcggactattatcagattgatgatttactcaccactgaagagcagtctatcaggaagaatgtcagggctataatggagaaagaaattgcacccattatggcaacgtactgggagaaagcagagttcccatttcatgccattcctaaactttcaagcctcggtgtagctggaggcacaataaagggatatgggtgcccaggactttcaataacagcaagtgctattactatggcagaaattgcacgggtagatgcaagctgctccacgttcattctagtacactcctcccttgcaatggtcacaatagctctttgtggatctgaggttcagaagcagaagtacttgccatcccttgctcaacttactgctgttggttgctgggcattgacagaaccaaatcatggaagcgatgcaagctctttgataactacagcaaccaaggtacctggtgggtggcacatagatggacaaaaacgctggattggtaacagtacttttgctgatgtgctcgtggtattagctaggaatgccaatacaaaacaactaaatggatttattgtgaggaagggtgctcctggcttgaaagctacaaagattgagaacaaaattggtctcagaatggttcagaacggtgatatagtttttaataaagtatttgtccctgaggaagatcgactgccaggtgtcaattcatttcaggatataagcaaggtccttgctatttcacgtgtcatggtggcatggcaaccgattggtatatcaatgggggtgtttgatgtctgccatcggtatctgaaagaaaggaaacagtttggagttcctctagtagcttttcagctgaaccaagaaaaacttgtgcgaatgcttggtaacatccaagcgatgcttcttgttggctggcgactatgcaagctttatgagtcagggaaaatgacaccagggcatgctagtttagggaagggttggacttccagaatggctcgtgaggtggtttctctcggtcgagaattgttgggtggaaatggaattttggctgattttctagttgcaaaggcattctgtgacctggagcctatatactcatacgaaggcacatacgacatcaacagcctggtgactggtagagaaataactgggatcgcaagcttcaaacctgccgcattagcaaaagctcggttataa</cdnaseq> |
| Protein Sequence |
<aaseq>MAGKQGDGREEDGAKVGLPALDISLAFPQATPASIFPPSASDYY QIDDLLTTEEQSIRKNVRAIMEKEIAPIMATYWEKAEFPFHAIPKLSSLGVAGGTIKG YGCPGLSITASAITMAEIARVDASCSTFILVHSSLAMVTIALCGSEVQKQKYLPSLAQ LTAVGCWALTEPNHGSDASSLITTATKVPGGWHIDGQKRWIGNSTFADVLVVLARNAN TKQLNGFIVRKGAPGLKATKIENKIGLRMVQNGDIVFNKVFVPEEDRLPGVNSFQDIS KVLAISRVMVAWQPIGISMGVFDVCHRYLKERKQFGVPLVAFQLNQEKLVRMLGNIQA MLLVGWRLCKLYESGKMTPGHASLGKGWTSRMAREVVSLGRELLGGNGILADFLVAKA FCDLEPIYSYEGTYDINSLVTGREITGIASFKPAALAKARL</aaseq> |
| Gene Sequence |
<dnaseqindica>5145..5273#4970..5062#4688..4859#4524..4600#4268..4427#4066..4175#3498..3557#3323..3396#3070..3193#2069..2146#1666..1772#268..369#126..141#actactactactcctctttcccactcctctcgcttccttcctcctcctcccctgcttcgccgccgcgtgctcctccgccgccgccggagaagctccaagcctcctcctcctccgggccgccgggaatggcggggaagcaaggtgtgggggtggcgcttctcctcccgtggtttgggaacggctcgattttggtgcggcgttttgggtgggtgattcgatcgattcgacgcatttaattggtttgttggttggttggttggtctccaggagatgggcgcgaggaggatggcgctaaggtcggcctcccggcgctggatatctcgctcgcgtttccgcaggccacgccggcatccatcttcccgccatcaggtgaggaaaaacaaaattgagttcatccatccctttggtgcgtgttgaattgttgatccatgaatgaagcgagatggggaggatcgatttttcggtcaacatgctgataagatgtttactagtcggattacttactgttactggagattagctggttttgtgctgcgagatgggaaaattgtgatgatctgaccgtagccttgcctggttatcctgttgaattgcttggccataattgtccgctcctatcattgttttgttttagtagtttcagtaccttcagtactattcggaggttttgttgcgcgcgtcacttgacttcaattattaggtacggtcattaggccatgtaggagtcatgcgtgccgctttattttcaacttaatgcagctgctgtcgaacttcgctcgatagttctagaatagtagagtttgatatttcctcgattcgtcttttattagcctataaaaggctaaaacaatgatgtcaaaacttttctttgcgtcaaaaaaatgtcaaaactttctaaagtcttatcgtaaatcaggaaatcccaaaacaatattaatctactagatgtgtcagtcaaaacacttacaatattataattatattactttatatattaataggttacgcaaaatggttcaagttggttctttcagacaccccccccccccaaaaaaaaaagtcaataacatcacatggagagaagtgaagttttttctaacatcaaagataaatgttcgtgtggtccctgcgattaagaaatattggggtgtactacaatttatttgttaatgatgcgagaacctatttccagaagcatataaagtctgcatgatgtagaaatattctgtttaagacattctcattgattggagccttggatgggttgctttggcatccaaaaatgcacaaacggaactgtattatcacgttcttttgatatccaacatatctcttatttaattcttagaccttagtagtatgttgatcatttctttttgtcttccaacatatcaggctgtttttccccgcaaaaaaaaaaacatatcaggctgttcttatttgacatttataatgctttatattcatgtgttcttgcttctcgatctgttgctgcttcattttcaggattgggctattcaacccttggtttttgctttaggaatgctaacttagatataggatcctaggttcagtgttctcagttaatttgtagtgtaccaattagaaggtacttggtgggtgttgcatacggttttatctgagtatatacaccttcatttgcagcatcggactattatcagattgatgatttactcaccactgaagagcagtctatcaggaagaatgtcagggctataatggagaaagaaattgcacccattatggcaacggtatgtcaattccgaaacaagtatgtttctggcattattgcatccttgaagtttttgcctatcatgtaaaccacagtaaacttgacctcctttatggaatcttatattatattttaagttttacctagcaatatattgctcataacaaaactttttcagaaacctgtaagagcgcagaagcactaatctactataatttgattaactagataatatgcccttgacaaactttattggtcatataataacctgcctttagaagatgacataaccatttcgtaaatttgctactgcagtactgggagaaagcagagttcccatttcatgccattcctaaactttcaagcctcggtgtagctggaggcacaataaaggtaacaatttctctatgatgcagttatcttttagatcagtcaaattaagttcagcagtatttgtgcatcacgttcctattcaatctgttccacgaaaagaatggagaatttacgtaagggatttttttagacaatctactcgagattttcttcagtactcttgctaagataagcttcttgttttcaaagaagaattaatagtaaagattgtgacattcaattgccttttcgcatgagttgccgagtaggtagtatttgtggatcaaaccctataagcttaaagccattgtttttgtcatctagataaatctcaaatcaaagtgtttctttgaacttgaaggttgatcaggttgctcttattttctacttcctccgttttacaatgtaagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatattatatgaaatatgggtaatgctagaaagtcttacagtatgaaacggagggagtatctacataaagaaatcaagccaaattcttagtcactctttataattgaatctgtagcatacagcgagtaatatagcaagtcagaataggatacttgtacctttaggtgcaatgtattcaagagattggcacccttgctgaattgaaattggccacctgcaacattgatgttgttagagtttggattggtttgtgcaattattgcatgcattatgcacaaatggtgtttgtgtctatgatgctctcatatggatttggggggatgggaacagagatgtaatagaccagtgagtcaagaaggtctgtatttaagtacaaattttgccagagtgctgaagcttacccagatatatgattgtctttacatttcttatgattttcaatgctccagattttctcaacttcattgtgtgtgtgccttactacagggatatgggtgcccaggactttcaataacagcaagtgctattactatggcagaaattgcacgggtagatgcaagctgctccacgttcattctagtacactcctcccttgcaatggtcacaataggtaaaacatctacgattttttaattgatactatctcatataatctaatttgaaactttgccaaagttggttgtgctactactgaaccatgcttttgctcttctctgttttttttttttctgaagaacagctctttgtggatctgaggttcagaagcagaagtacttgccatcccttgctcaacttactgctgttggttgctgggtacgtggaaaattgtctaatattcactttgattgtaagcaactcgtacaaatgagtaaatggcgcatagtatccacctaaaatatatttcctttctgtaggcattgacagaaccaaatcatggaagcgatgcaagctctttgataactacagcaaccaaggttcagcacttgaggatttgaagcattatatgttttttactaaataaaaaatctcaaatattttttgtccaattctatatacatgtcttgcagcaggggagcagcaatgcatggtatctcatagtccatagcaccctaatatttttttgttccttccagttttattaggatttaattttttttgttgaactcttttggtttccagctttgtagtaacataagtggagagcaagatagatactgtaacaaagttgctttgttgcaactgaaacccaaagcctgcttttatctgctgcttccatgcataaatcagattagatatcttgcctccccgctgagtacctattccacctccacatttggataatatatcatgctacctcattgtcatactgtgcagatctaaaattgagtattcttggtacattttttggatgtatgaacctttgatgggcaagcaaataagtaattgtgcttagcataaattttgtggcttatcatgaaacaggtacctggtgggtggcacatagatggacaaaaacgctggattggtaacagtacttttgctgatgtgctcgtggtattagctaggaatgccaatacaaaacaactaaatgggtaaaccatcagctttagattcgatctttggaattgaagcataaatgactcagctagtgttgctatctaataattcatttggctccttgtagatttattgtgaggaagggtgctcctggcttgaaagctacaaagattgagaacaaaattggtctcagaatggttcagaacggtgatatagtttttaataaagtatttgtccctgaggaagatcgactgccaggtgtcaattcatttcaggatataagcaaggtattgatatttcatagcattttcgcttatactgatacattaacatgttgcatagagtaatccagtcctggtaccaacttttgagtgcccaaacaggtccttgctatttcacgtgtcatggtggcatggcaaccgattggtatatcaatgggggtgtttgatgtctgccatcggtatggaccagttcaccattttttggttatttatatgccacatcatatgcattttcacactcttcttttttgcacgaattgaaataggtatctgaaagaaaggaaacagtttggagttcctctagtagcttttcagctgaaccaagaaaaacttgtgcgaatgcttggtaacatccaagcgatgcttcttgttggctggcgactatgcaagctttatgagtcagggaaaatgacaccagggcatgctagtttagggaaggtttgtgaaatactagctggcaaaggctgcctttcttcctctgtaactagaactttgtgttcctttgatatatcagtgattttaacttttgattcctcgctcccatttagggttggacttccagaatggctcgtgaggtggtttctctcggtcgagaattgttgggtggaaatggaattttggctgattttctagttgcaaaggtagatagacctcatgtaggatattgagatattcatatgccatcattcaatacttaattaatgatttttattatctccgtaggcattctgtgacctggagcctatatactcatacgaaggcacatacgacatcaacagcctggtgactggtagagaaataactgggatcgcaagcttcaaacctgccgcattagcaaaagctcggttataaccatcattttccgaagaggataaagctacagctcactgcaatttcttctcagattgctactacaggaagcaaataaaaatcaggtccccatgcaccgattattggccggctaatgcagcatgatgcagaccaaatagactccttggaaaattctctggtcaatcttggctggctagaaggctgtgccgtgcgagaggatatctaacgtatccgaatcacctcgttggaatcgtgtccggtggtggaggacagcatgaataaaagctccgtcctgtatgccaagtcttggcatttaactgttgtatacatttgtgaacgctgtaaaatctgaataaaggtcaagaacagtagtgtcgaattttacctctttcaaacctacactgcctgttcttgttttggtttgtttcaagcatgggtccagagaataattgtcctttctcgattgtttgccttactctgtcagtaaattttctgactttagacaggaaacttctgtatatctagcatgcgcactgctacacgtgcttaaaagattcaagacaacttttacg</dnaseqindica> 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| External Link(s) |
