Difference between revisions of "Os01g0175200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0175200| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001048705.2 GI:297596196 GeneID:4327133| Leng...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0175200|
 
GeneName = Os01g0175200|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0175200

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001048705.2 GI:297596196 GeneID:4327133

Length

3016 bp

Definition

Oryza sativa Japonica Group Os01g0175200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3857824..3860839

Sequence Coding Region

3857824..3857866,3858097..3858176,3858257..3858424,3858542..3858643,3858973..3859125
,3859865..3859993,3860115..3860204,3860759..3860839

Expression

GEO Profiles:Os01g0175200

Genome Context

<gbrowseImage1> name=NC_008394:3857824..3860839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3857824..3860839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaatgaatatatatacagagaagaagaagagtcaatcaaggaagacgaagagtcgtggcccttccggagaaatcagcctaacgtaattatcaataatggagccggtagtcccctgatgagttcccttatctaccgatcattgaagtgtatgaagctactcataaaggctggtgctgatgttaatggcaagggtacagttgtaacccctttgatgcttgctgcgtcgcagggaggctatactaacttcattcagtttcttctgaaggctggagcaaaccccaatattcctgatgatttgggttggttgccaatagagcatgctgcattacgtgattgcagggaagaagttgaaatgctatttccattgacttctccaattccaaatgtcccaaactggagtgttaatggaataatcgctcatgcaaaagtcaaaaatacaaagccaatggatcaacatcagaaggagagtagaaaagtcgttttgaaggcacaggcagatttggtattcaagcagaagaattacgccgctgcagcaaaaatatatgatctggcaatagctcatggaccgactgcagttttgtacgcaaacaggagcatctgtagattgctcatgggtgatggtgaaggtgctctttctgatgcttacagatgccgaatgatgcggcctaactgggcaaaagcttgctaccgtcagggtgcagctcacatgctactcaaggagtacaaacatgcgtgtgatgctctcatggatgcacaaaaattagattctgggaatgtcgagattgagagggaactaaggaaagctagggaattaatggcgaaacctccagatgagcagtga</cdnaseq>

Protein Sequence

<aaseq>MENEYIYREEEESIKEDEESWPFRRNQPNVIINNGAGSPLMSSL IYRSLKCMKLLIKAGADVNGKGTVVTPLMLAASQGGYTNFIQFLLKAGANPNIPDDLG WLPIEHAALRDCREEVEMLFPLTSPIPNVPNWSVNGIIAHAKVKNTKPMDQHQKESRK VVLKAQADLVFKQKNYAAAAKIYDLAIAHGPTAVLYANRSICRLLMGDGEGALSDAYR CRMMRPNWAKACYRQGAAHMLLKEYKHACDALMDAQKLDSGNVEIERELRKARELMAK PPDEQ</aaseq>

Gene Sequence

<dnaseqindica>2974..3016#2664..2743#2416..2583#2197..2298#1715..1867#847..975#636..725#1..81#atggagaatgaatatatatacagagaagaagaagagtcaatcaaggaagacgaagagtcgtggcccttccggagaaatcaggtggctttgcactttttcattatactccaacgtaagattgtcttttatattttagtccttttcgcgttttggagcgcacgcacgaaccacgctgtgccacgtggcatcgctaatcgctcgataacttgcacggatttcgatagtaagagatggcatatttgtaccttcatctacctcattgctgaccttctggttcgatattgacttcactaaatgtgcactaaaatctcttctattccaatgcagtagcttcagtttggcttcatgaaatttgagtaaatgtggcattgcctacatctgaactctgattataataattatggtttcacgtgtaatatattttttctattgtagtaaaaagtctgtaaaatatgcacataatgcaactttaattctcaacagcgaaagttgctaacttcaacagttagacttataaaaagtggcaaacgctaatcagaaaaaaaaagttagagcattatattgcttttcctttttcttacacatattctgctttcaggctgtatttaggctaaatacttatattctgctttcagcctaacgtaattatcaataatggagccggtagtcccctgatgagttcccttatctaccgatcattgaagtgtatgaagctactcataaaggtcagtgttttattgagtctatatttggtcaactaatgctgtgttttaattttgctaactcaagacatttgttccatgaacatatggagctaaatattctattgcacaatgcttttctcaggctggtgctgatgttaatggcaagggtacagttgtaacccctttgatgcttgctgcgtcgcagggaggctatactaacttcattcagtttcttctgaaggctggagcaaaccccaatattcctgatgatgtatgttttctattcttctgagtcagttgttgcttctccactttggtctataagtctgattcttttgtgttttattacaactctgaggatgttttgtctaaggtcatgtcagtttatgattaagatacagattttacctcggtttttgttagcaaaattttcaaattgttaaactatgtatttcgtgcgaaaactttctatatagaagttgctttaaaatatcaaataaatccattttcaagtttaaaataattaaaactaaattaatcatacactaatggttttcttgttttacgtgtcccatatttaatattcatccttgtcacatcctaagagggcctaatttaacaaaaacattgcacttatgatttgcatattttgtagtttcctatggattatctgaacctgtgttcttttattttattgtatgtgtaagtatatcttacgagttgtacaaagcatggatgacctttcagcaaccgacgagttctcaaatccagcctatatccaaaataccattttgatagaagttcatatcaatgtccaaaaagcccatggccagctttgaacctacagaccatggttttttgggacgcaatgagtcgtttggttgaaacttgaaagccacagattgtgataataggccatacactgatttcaccaatattgtttgttttaggttccttgctgaattacgctgtatgaaactatttttcttcattctgttgtgcttgtgcagttgggttggttgccaatagagcatgctgcattacgtgattgcagggaagaagttgaaatgctatttccattgacttctccaattccaaatgtcccaaactggagtgttaatggaataatcgctcatgcaaaagtcaaaaatacaaagccaatggtacgtttcgtacagatatgcacttttgatctttctgtactaaaggtcctgctatgctctctgctcatatttcatgttgcttaccatgcactttgcattgcagagctctatttcacccacttcacgtctttgatgcttgttaggctgtaaaactggtttagcttacatatcaacggcatttaatagtactagatagaaggatcatgtcttaacagtactggttaatagtactggtttagctttgtaatcctaaataaatgttctgatattcaaaatttcaaaagttaacttcagatttgcatcaagatactattgtttacgttgtttaggatcaacatcagaaggagagtagaaaagtcgttttgaaggcacaggcagatttggtattcaagcagaagaattacgccgctgcagcaaaaatatatgatctggtaatttcttgcaccttatttctgattgttaacgctaatcaattattgttgttataaagtttttgtatgttattcttaagcttgggaatgatttgtttatctgatgcttgagcataggcaatagctcatggaccgactgcagttttgtacgcaaacaggagcatctgtagattgctcatgggtgatggtgaaggtgctctttctgatgcttacagatgccgaatgatgcggcctaactgggcaaaagcttgctaccgtcagggtgcagctcacatgctactcaaggtaagactcactgcagttaacgttttgtgatcctggtattatggtcggtgtcctgaactcctgatttactctaaaaccaggagtacaaacatgcgtgtgatgctctcatggatgcacaaaaattagattctgggaatgtcgagattgagagggaactaaggtaatcttctgtttcgctcgagtatgccttccaaataaaaatgtggttgcgcagggaacatgaccattagtactggcattccgttgtgattatgcccacatttactgcaactgaagcaactcaacactcaactgttcttttcggttttatatgccattcttccatctttgggtcaattttacgctttgggttgttataactgacatttttttggtccaaatcttttgtaggaaagctagggaattaatggcgaaacctccagatgagcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0175200, RefSeq:Os01g0175200