Difference between revisions of "Os01g0177200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0177200| Description = Similar to Ubiquitin-specific protease 14| Version = NM_001048720.1 GI:115434853 GeneID:4323863| Length = 8752 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0177200|
 
GeneName = Os01g0177200|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0177200

Description

Similar to Ubiquitin-specific protease 14

Version

NM_001048720.1 GI:115434853 GeneID:4323863

Length

8752 bp

Definition

Oryza sativa Japonica Group Os01g0177200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3985647..3994398

Sequence Coding Region

3985771..3985866,3985965..3986145,3986668..3986780,3986854..3987190,3988022..3988116
,3988330..3988463,3988548..3988604,3988711..3988788,3989333..3989387
,3990159..3990239,3990369..3990567,3990642..3990699,3990770..3990892
,3991440..3991528,3992450..3992539,3992619..3992792,3992911..3993035
,3993246..3993372,3993826..3993998

Expression

GEO Profiles:Os01g0177200

Genome Context

<gbrowseImage1> name=NC_008394:3985647..3994398 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:3985647..3994398 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatctcctccgctcgcacctccacaaggtccgcatcccggagcccggcagccgcatccacaaggacgagtgctgcgtctccttcgacaccccgaggtcggagggtgggctgtacgtcgacatgacctcgttcctggggttcgggagggagcacgtggcgtggaactacgagaagagtgggaaccccgtgtacctccacatcgtgcagcgccggaagccggagcccgacgacgaggcggatcgcccgctgaagaagcccacgctactcgccatcggagtggagggaggtttcactgatcaagaacccgaatacgatgaggcttttgaaattgttatcttgcctgaatttacttctctcccttttccatcaattgacttgccagagaaggttaggattgcagttgacaaagttatacttgccgaaagtgctgatcgaaaacaacaattggcttcttgggttgctgacaagaaaaaagtcagtgcacatgctatggatctgaagcagctagacaatggtgtcattgtgccacctacaggatggaagtgcagcaagtgtgataaaactgagaatctctggttaaatttaactgatggcatgatcctatgtgggaggcggctttgggatggaagtggggggaataatcatgctattgaacactacgaacagactaaatatcctcttgcggtaaagcttggaacaattactgctgatttagaagcagcagacgttttctcatacccagaagatgatagcgttgaagatccactattagcgcagcatttgtcacattttggtattgatttttcttcactccaaaagaccgagatgactactgctgaaagagagcttgatcacaacacaaattatgactggaatagaatacaagaaagtggcaaagatgccgaacttttatacggccctggttatactggccttgtaaatcttggaaatagttgctatatggcctcagtaatgcaagttatgttttcaactcatccttttatatcacgctactttgagaagcagagcttgaaagctgcatttgcaattgccccagctgatccaacattggacttgaacatgcaaatgacaaagttggctcatggaatgctctctggcaaatactctgtgccaaatcaggagggacaagaaggaatacaccctcgtatgtttaagacagttattgctgcaaagcatcccgaattttccagtatgaggcaacaggatgcgcttgatttcttccttcatcttattgaccaagttgatcaggcaaacaccggaaaccatgagctgaatccttttacagggttcaaattcttcattgaggagcgtcttcaatgcccttctggaaaagtctcctataacaaacgttctgactacattctttctttgaacataccgttacatgaagctactaacaaagagcagctagaagcatttcatgagaagaaagctgcaatggatttggatggaaaggaagtgtctaatgaggaaattgtgaggcctagagtcccactggaggcatgcttagcaagtttttcaggcgcggaggaagtgcctgaattttacagcactgcattgaattcaaagacaacagcaattaagactgctggctttaaaacatttcctgattacctggtgttgcagatgcgcaagtttgtaatggaagcaggatgggtgccaaagaaactagatgtatacgtagatgtgccagatataattgatatctcgcacatgcgcagcaaaggcatacagcctggtgaagagctactacctgaaggagcttctggtgataacaaagctgaacctgttcatcctgttgccagtgaggacattgtatctcagctggcaagcatggggttcaattatcttcattgccagaaagctgctattagtacatcaaacacaggagttgaggaggcgatgaattggcttctctcacacatggatgatccagatatcaacgatccaatatctaaagattcacaggctgctgaacaaactgttgatgaaactagcgttcaaactcttgtttccttcggatttcaagaagatgttgctcgaaaggccttggcagcttctggtggaaatatcgagagagcaacagactggatttttagccaccctgaggcttttagctcagtacctactgattcttcaacaagcaatatggaagatgatgatgcacacataccagatggaagtggcagatacaaattgatggcgtttgtgagccatatgggcacctctacccattgtgggcactacgttgcccatgtcctcaaagacgggaggtgggtaatattcaatgatagtaaggttgctgcctctgtcgacttgcccaaggatatgggatacctgtatttctttcaaaggatataa</cdnaseq>

Protein Sequence

<aaseq>MDLLRSHLHKVRIPEPGSRIHKDECCVSFDTPRSEGGLYVDMTS FLGFGREHVAWNYEKSGNPVYLHIVQRRKPEPDDEADRPLKKPTLLAIGVEGGFTDQE PEYDEAFEIVILPEFTSLPFPSIDLPEKVRIAVDKVILAESADRKQQLASWVADKKKV SAHAMDLKQLDNGVIVPPTGWKCSKCDKTENLWLNLTDGMILCGRRLWDGSGGNNHAI EHYEQTKYPLAVKLGTITADLEAADVFSYPEDDSVEDPLLAQHLSHFGIDFSSLQKTE MTTAERELDHNTNYDWNRIQESGKDAELLYGPGYTGLVNLGNSCYMASVMQVMFSTHP FISRYFEKQSLKAAFAIAPADPTLDLNMQMTKLAHGMLSGKYSVPNQEGQEGIHPRMF KTVIAAKHPEFSSMRQQDALDFFLHLIDQVDQANTGNHELNPFTGFKFFIEERLQCPS GKVSYNKRSDYILSLNIPLHEATNKEQLEAFHEKKAAMDLDGKEVSNEEIVRPRVPLE ACLASFSGAEEVPEFYSTALNSKTTAIKTAGFKTFPDYLVLQMRKFVMEAGWVPKKLD VYVDVPDIIDISHMRSKGIQPGEELLPEGASGDNKAEPVHPVASEDIVSQLASMGFNY LHCQKAAISTSNTGVEEAMNWLLSHMDDPDINDPISKDSQAAEQTVDETSVQTLVSFG FQEDVARKALAASGGNIERATDWIFSHPEAFSSVPTDSSTSNMEDDDAHIPDGSGRYK LMAFVSHMGTSTHCGHYVAHVLKDGRWVIFNDSKVAASVDLPKDMGYLYFFQRI</aaseq>

Gene Sequence

<dnaseqindica>125..220#319..499#1022..1134#1208..1544#2376..2470#2684..2817#2902..2958#3065..3142#3687..3741#4513..4593#4723..4921#4996..5053#5124..5246#5794..5882#6804..6893#6973..7146#7265..7389#7600..7726#8180..8352#aatctaatcactcctcccctcttccaccctccccccacctcgtcgcctcgccgtctccacccccaaaaccctagccgccgccgcgctcctcctcctccgccgccgcccggcgccgcccgcggccatggatctcctccgctcgcacctccacaaggtccgcatcccggagcccggcagccgcatccacaaggacgagtgctgcgtctccttcgacaccccggtaaaccaaccaaccacccacccacccacccacgccttgtcccccccttcgctctggtttcctagggttagggttttgacgccgatttcgccgtgcagaggtcggagggtgggctgtacgtcgacatgacctcgttcctggggttcgggagggagcacgtggcgtggaactacgagaagagtgggaaccccgtgtacctccacatcgtgcagcgccggaagccggagcccgacgacgaggcggatcgcccgctgaagaagcccacgctactcgccatcggtatgagtgacagcgctttcccactgatcaccatcgtgtatttcatactgttaaaattgtgaacgcatgaatcgcgttagggtatgtgattgtgtttggatgatgtgatcgttttcctattgcgacttgtttttaccctatgatcaacatcgtatttcatactgttgaaaatctgtatccccattatctgttcccctttgtggtagagacttaccaaactatggtagttatcatatatcttgtgttctgtttgatctgttgagctactgtgctgtagagaaaaaatatggtagtgcattgctttgtttgctaatctggaaacagagaccaacatatggtggccatgttggtgaattgtttgttatgtgatatctgtatgctagttatttgtaattagaatagttgcctatgtcctggatttagatctatatagttgtattttctctgttctgtattcccatgatggcaaatagatgaatgcgttgaccatctttactaatccgggttttctacaatttataggagtggagggaggtttcactgatcaagaacccgaatacgatgaggcttttgaaattgttatcttgcctgaatttacttctctcccttttccatcaattgacttgccagagaaggtaactgtgcttgacataagagattgtacttacttactacatagtagttacttactactctacaactccacaggttaggattgcagttgacaaagttatacttgccgaaagtgctgatcgaaaacaacaattggcttcttgggttgctgacaagaaaaaagtcagtgcacatgctatggatctgaagcagctagacaatggtgtcattgtgccacctacaggatggaagtgcagcaagtgtgataaaactgagaatctctggttaaatttaactgatggcatgatcctatgtgggaggcggctttgggatggaagtggggggaataatcatgctattgaacactacgaacagactaaatatcctcttgcggtaaagcttggaacaattactgctgatttagaagcagcaggtaatgctactcgtggaccttttacatatttaggcttcctcttctattatcgaatacaacttacggtgacattgggttgtcgcctgtgaaaaattgaactaaaccccttttaacctctcacaaactgtatcctttgtaatatctaaattaaaagtgtcatatatatgatgctcaacttggaatgcacttttagaatactatactccctctagttttaaatatacaaaacggtggaccttttaaattcgtttgactatttgtcttctctagaaatatttgtgcaaataaacaaacatataaggcactcttaaagtacatttgatgaccactttacttaactaagtaattgaataaacattgttggtcaacgtttgagaaaagaagtggatggtgtcatatatttaaaaccagaggtaatacttaaatagcttttagagatatgtttgttataaatacttgtctttattcagaggcacaaaaagttggaaaatgttaatgattttgtgattggagggagtatattgcaattattattgaatattcactttaatcagtaagactcgttcttaaattccagagttgttccctggatacatactgctcgtacttcataatttataacacacagcccaattagctactataaaagtaatttacactgatattttaaccttccattgaaatattttgctttcgtcttattttagttttaacaaagaatattcttaaagtcctaaagcaaccttcctatcaagggcatgtgctgctgaagttactgttgttttatatttaaatatacctattcatacaagcttttctgtgacagctcagacgttttctcatacccagaagatgatagcgttgaagatccactattagcgcagcatttgtcacattttggtattgatttttcttcactccaaaaggtgagtagtatcattttcgatgacatttatgagcgataatttagctctgctcaatatgacttgctttttttattgtgatagtaacagattagtactttttcatgggaataatatattctgtagcatctcatgttcatactgtgttttcccctttatatgcttgtctatctgtctagtttagaggctatttgatgtgacccttttgttgtgcagaccgagatgactactgctgaaagagagcttgatcacaacacaaattatgactggaatagaatacaagaaagtggcaaagatgccgaacttttatacggccctggttatactggccttgtaaatcttggaaataggtagctttggttcattggttgacgtcatgaattttcttttgtaataatttctcttatgtaatgcatgcgtttccttctttgcagttgctatatggcctcagtaatgcaagttatgttttcaactcatccttttatatcacggttggttctactttctcaattgatacttcagcacttcttgtctagagttgcattttttcctttttagtagcacatgctcttgcatttatttcttgcatcatttcagctactttgagaagcagagcttgaaagctgcatttgcaattgccccagctgatccaacattggacttgaacatgcaaatgtaagtgtacaccagctgatctgtgtttttgcgtgtattggtattggattagtcactattctgaggtagttggtgtgagatgcagtgttaccttcttctaatgctaaatgtaaggataatacataaagcagttttttggccatttatcctgtatggttgtatgtgaagaaaccgtaattcgggtacaattacttttttaaacacttgcaatcacaaacaaagtgattctttctaggatctttttttttttggtgaatcagcactttcttgtttctttgctcgcgcttggtagctgctggagggaattcatcctgggtgctgtagtggtccagtgtgttagactcatagcaaatgctgtaatcaaacatatatcatgctgtccaagtgtccattgaaggctttgcattttgtttctaagtgaacgttttcctcaattcagtgctactgtggtatgataaaagaaatctagaaagaatctatttttatggaagaagttttagtaaaaaatatttccgctcttatactcatcacttgacattttcaggacaaagttggctcatggaatgctctctggcaaatactctgtgccaaatcaggaggtaagaatttgtttgtatatttgcctgttgttacgctttgtgttgttggtagttacctacttaccttagcaattttgtttgtttcagtaatggttcaatcttcgagtagactgctttcttgttttattttggatatgtgcacaaattacagcttcttaattctctgacaaatatggtccctatttgggtgggcaagtcctctcaagtctcaactgatatacaaaacctgcctgcatttaactgtgtgcgagaacttggaagttggaatattccttttctgtagcataaattgtgactcaagtcaaattctaaggaagctttaattcctaaatgtgctacacacagcttcctgctatcaaacatggtgtaaacatggaatcctacccacatgtttggaagtttaatactattgtggatttcaactcagccaatattcactgattggatgcacaaattctttaacttctattccttcaattctatgcaattttaaccactggtcactttcaatatgaatcgagaccctgtctggaataatggaattactcacgatatagttcaatcctatggaatctgaaaatgtttggcgttcctaacagggcccaaggtcgggagtaccatatacttactatacctgctaagttttctgatacataatgtgatcagcagatctcattttgatcctattctcattttttgatacttacagcctgaatagtacttttggacacacttttgaatactcctaatttttatgttccatattgatagggacaagaaggaatacaccctcgtatgtttaagacagttattgctgcaaagcatcccgaattttccagtatgaggcaacaggtactttggacctggaatcacacatttttggttgaggagctacttatttgaattttcctttgcatcattaactgcaattttgggtacaattttttccaaatagtcattttaactcatctctttgtccaggatgcgcttgatttcttccttcatcttattgaccaagttgatcaggcaaacaccggaaaccatgagctgaatccttttacagggttcaaattcttcattgaggagcgtcttcaatgcccttctggaaaagtctcctataacaaacgttctgactacattctttctttgaacataccgttacatgaagctactaacaaaggtgactttaaaacctttttccctgttgtattataaagttagtgcatatatccttgacacctgtgagatatgcagagcagctagaagcatttcatgagaagaaagctgcaatggatttggatggaaaggaagtgtaagttgttcatagctcatgcactgtctaatgagcacgacttatgtttcactttgcttccataaaacaggtctaatgaggaaattgtgaggcctagagtcccactggaggcatgcttagcaagtttttcaggcgcggaggaagtgcctgaattttacagcactgcattgaattcaaagacaacagcaattaagtatgcatatcttcattgccatttggttctattatatacatggaaatgtggtacagccttattgattgaataagaaatatttcaaaatgcaagcaaactcatatctgtggcatgttcagtttgtaaaagactgaatctctcaaacttgccttatatgtaacttggctagctgtaattcaactcaatatagcagatgaaatgtaatgcctgagcaattcaacattaacacattactgtgactgggtgtactgctataatttagtcgtactatcttaagaccattaccgagacacttaatagggaacttccagtccttgtttttttaatttctcagtgtgaggtgtcatgaccttggtttttatttttgaacatgattcctctgcttatttagtctcctggatcattcacaatgttttgtttcaacattgtccttgtgtgcaaatagtaaaatggtatgttcattatagttttagtataggtctgtttaatgatgtggaaacaggagatggcttcttactaacacattatataacttgttggttttcaggactgctggctttaaaacatttcctgattacctggtgttgcagatgcgcaagtttgtaatggaagcaggatgggtgccaaagaaactaggtaatgtccctatcaagtgtcagttgtctctcatgtgtgctgactctagattcgaatagttgccccaaactgtatggcggactgatttcctgaaagaactagcactctagcagtacctatccatatgatgacctatattcttcgtattttctggcccagtaaactttttatcccataattcatgttgatagaagttgattggaatgaggctttattaccagcgaatgatattccctccattttttaatagatgatgccgttgacttttgaacacatgtttgatcattcgtcttattcaaaaattttatgcaaatatataatatataaaccatgcttaatgtactttgagtgataaaacaactcacaacgaaataaattataatggtcaaacgtgtaacaaaaagtcaacggcttcatctatttaaaaagggaggtagtgtgatgtaacacatcgcattgtttgatgtactctgtctccaacaaacaataattttgaagtaatcctataatttggcaggaataacaactaggctttacttctaagttcttagtatttcacttctcctgtttgagaaattttggaacctgagctggtttcgtggtgcatacactccctccatcccaaaatataacaacttctagccttcaatatttgtcccaaatataacaacttctccacctacattctcttctcaaccagccacaatcttccaccattcaaattctctacctacctcctcttctcaaccaatcacagccttctcccatttagttccactttcataataaccgagtccaacgtactccttatattttgggacgtaggtagtaactaagtttccatgtagacagtaattcagtttcttttcaccatatttggtcatttgttgtcttgagtcttgacattgaatttcccctcagatgtatacgtagatgtgccagatataattgatatctcgcacatgcgcagcaaaggcatacagcctggtgaagagctactacctgaaggaggttagactgttgtttattagattttcaacttgatcagattttcccgattgactttgctgactgcaacatattcttgcagcttctggtgataacaaagctgaacctgttcatcctgttgccagtgaggacattgtatctcagctggcaagcatggggttcaattatcttcattgccagaaagctgctattagtacatcaaacacaggagttgaggaggcgatgaattggcttctctcacacatggatgatccaggtcagtatacaaacagaaatgttacatattacttctttgtcatcatgaaaggatgattggccgtcttgtaatttgtaacttgaccgctacaaactttaatcacctttctgctatacagatatcaacgatccaatatctaaagattcacaggctgctgaacaaactgttgatgaaactagcgttcaaactcttgtttccttcggatttcaagaagatgttgctcgaaaggccttggcagcttctgtaataatcttctgtttttaatttcatccatgatagttgatcttttacattttcttgtacagttcgcaatgttgaatacctctcagaaagttgatatttgcttattttcatataatgacctttcaaaactgtcttagggtgttcctttcccgttgtctgcaaccaacctttttgatcggaggcttatgttttgtacttctaatgtgatagggtggaaatatcgagagagcaacagactggatttttagccaccctgaggcttttagctcagtacctactgattcttcaacaagcaatatggaagatgatgatgcacacataccagatggaagtggcagtaagtttttctaccccttctgttttactgtttctagtgccaagcttccaatctcatgagctaatttcattaacattctgaactgttaatgttgaatttgtagtttgcaacatttgaaagatgactttgtacatgccctgagcatttctgaataacgatggcacattatcgtcaagaaatggatgtggatttacaattatatgacccatgtcccatctaagtttccaagaaaacttacttttttaatttttttttcttttaagatatatgtaaagaaatccatggtagtgaatgattagccaaaccatataaaagtaagctccaaacttgtctcagactgtaggtgtttccaaaccattgggttcaatacttctagatggttgattatctatcttcagtatgtgtgtgtgttttgcagttcttggtttattaacattgctctatgctctgcaggatacaaattgatggcgtttgtgagccatatgggcacctctacccattgtgggcactacgttgcccatgtcctcaaagacgggaggtgggtaatattcaatgatagtaaggttgctgcctctgtcgacttgcccaaggatatgggatacctgtatttctttcaaaggatataaagcattagcagctgaaagacttcacaggcaagaaatacattcgctcgctgacttgagtcttagttatgggcacctatgatcaaaagcacggcggatagtcggtgaacttgcatgcagatggacttagagcgagtgttggtcacatcctgtcgtgctgactttagactgatcgatcagctgggatatcactttgttccatggcattatgcattggcacattcaattcttctttgtcgatctatcatcttagcgttaacattctgccatgaaaactttggactggctcaactttttacatatgaaatggaaaacaaaaggcaagggacggtccctgatgccgcatatatattttgcacattgtagcagagcgctgggtgttaaaagattggtcctggacacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0177200, RefSeq:Os01g0177200