Difference between revisions of "Os01g0178100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0178100| Description = Conserved hypothetical protein| Version = NM_001048724.2 GI:297596206 GeneID:4323867| Length = 3679 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0178100|
 
GeneName = Os01g0178100|

Revision as of 18:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0178100

Description

Conserved hypothetical protein

Version

NM_001048724.2 GI:297596206 GeneID:4323867

Length

3679 bp

Definition

Oryza sativa Japonica Group Os01g0178100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4058510..4062188

Sequence Coding Region

4058600..4058878,4059485..4059652,4060306..4060552,4061129..4061275,4061355..4061626
,4061727..4061888

Expression

GEO Profiles:Os01g0178100

Genome Context

<gbrowseImage1> name=NC_008394:4058510..4062188 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:4058510..4062188 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggaaacgccggggtcgtcggcctcccctcatcaggagaggctccttcaatccctctccgcccgcgggtggtgcttccgtgaccccagcaacgagatcatccaggagctactccacgcctccccctcgccgtcgccggaggccgtggagaccgagctcgtcgacgtggacctgaggctcttcggcggcaagtcgctccctgaccgcgccgccgccgccgccacggggaggcggctttcctacctccatggccccatcgtcctacaggtagtatcagtaagagatatatatagaagcatcattgatgcgtcctttaagaacccacagcaacaccgccttctgcgctttgttctgactgatggaatttctgaagcagtagcgatagagtttttcccaatcccgtttatcattgaagatattgctccaggtactaagatttgtcttgagaacaagattccaatacataatggcatattgtgcttaagtgcgaagaatataagtatcatggggggagttgtccaatcattgtatgaagagtggcagatgaaccagaaattctcagggttatctcgttcatccttgaggttgtctcaaaatgatgatggagttggacctccaccatttgagaagttagatgttgaagcacgtcctagtaggacatcccgttctcaaacctattctgataataaggctaggaaaccggaagtcggtcgtcagaatgtgtcagttagttccagtggcaaaccagtcaatgagagttcaagtgatgagaacaaagagtctgcagttgaacccaaacaatctatttcagatggcagaccaaaagaggtcagtgaagctattcctgttcaaaaccaagccactgcacagaagcttctgcagaaaatgacccaggctgcgcccgaagacagatatggtcggggccatagattcaagggtaaaggcaggcaagaagatactccagtatttaccctcgatgaatgggagaagcgaaaatccgctggtttgaagtccacagcacaaagctacatcgacgataccagccgagacgaggagctggcaaggcagctccaggagcaactagatcttgaagactcctatggagtgccagagagttcagacgcagatcgtttgcggatgagcatgttcagcttcagcggtcctgaagaaacgggaggcgggagaagagattttcgagggcgaggacgggggagaggaaggggccgaggacgagggcgagggcgaggcaggggaagattttag</cdnaseq>

Protein Sequence

<aaseq>MAAAAETPGSSASPHQERLLQSLSARGWCFRDPSNEIIQELLHA SPSPSPEAVETELVDVDLRLFGGKSLPDRAAAAATGRRLSYLHGPIVLQVVSVRDIYR SIIDASFKNPQQHRLLRFVLTDGISEAVAIEFFPIPFIIEDIAPGTKICLENKIPIHN GILCLSAKNISIMGGVVQSLYEEWQMNQKFSGLSRSSLRLSQNDDGVGPPPFEKLDVE ARPSRTSRSQTYSDNKARKPEVGRQNVSVSSSGKPVNESSSDENKESAVEPKQSISDG RPKEVSEAIPVQNQATAQKLLQKMTQAAPEDRYGRGHRFKGKGRQEDTPVFTLDEWEK RKSAGLKSTAQSYIDDTSRDEELARQLQEQLDLEDSYGVPESSDADRLRMSMFSFSGP EETGGGRRDFRGRGRGRGRGRGRGRGRGRGRF</aaseq>

Gene Sequence

<dnaseqindica>91..369#976..1143#1797..2043#2620..2766#2846..3117#3218..3379#ctatggcgtataccacaaaacccgccttcacgtctcctaccctagcactctcccagacctcgccggagaacacttcgccccccgactgcgatggcggcggcggcggaaacgccggggtcgtcggcctcccctcatcaggagaggctccttcaatccctctccgcccgcgggtggtgcttccgtgaccccagcaacgagatcatccaggagctactccacgcctccccctcgccgtcgccggaggccgtggagaccgagctcgtcgacgtggacctgaggctcttcggcggcaagtcgctccctgaccgcgccgccgccgccgccacggggaggcggctttcctacctccatggccccatcgtcctacaggttccgatgacacccctcttttgtttcgatattagctcagtaattctaattaattttattcctggtaaaaaaaataagggaaagaaatgcctcatttaggaacagttcttagtctgctattgattctgtggctggggattgtatccagattgtggaagcggccagagtttgtagccgagtagactgacgaaaagatgttcttggctgttcttgtatggatatgtgtcaggcctttgtgaaacgatggtgttcttggctggacataaggttgagaatttgtgtctggatgctagggaatggccttacttaagatcgtttcaatcatgtggctggggcttgcgttgtatcattctcagtttgtggatgggtcgggttttgtatccgagcagatgaaaaagatgttcttggctgttccagggtggctatctgaacgtcctctgtggaacaatgatgtctagttgtctatctcaatggtgaaacatgggcttgtctttcctgatcatgattgaacctacatctagtgtttgtggagctgaactgttgtccttgtgttttggatttttttttttactgtttgatccctgcttaatgcaaacttgtttgcaggtagtatcagtaagagatatatatagaagcatcattgatgcgtcctttaagaacccacagcaacaccgccttctgcgctttgttctgactgatggaatttctgaagcagtagcgatagagtttttcccaatcccgtttatcattgaagatattgctccaggtactaaggttagtccaccatgttcttgatctaggttctagatgtgcactgatatttgtcattctgctttattttaggttagaggacatagtcagagtctctgcacatagtttcatctttgtctgaatttcatcttaggctcctaactagttcagtattgagttcccatgtcaccggaactagataaatagaaggagagatgctcagatagctcattgatcaatggtgtgtttctattccacacatcccacatgaataatgtttggaaaacaaaatgcaagaatgctccttgataacattgaatctgaaatcctccttagtaaatgctgcatgaggtttgtgtaagagctacctgtagagatggtgtatttatattgcatcatcaggatggggttgggagatagcattcctaattcccactgtttgtctgtctgtctctgtcctacagtctattgagtttcatccttaatcattgcttatgagcaaactgcagcatagttttgatacagaacagtagaatattttcttagtgattatttacacaatatataccttgtcaaataaacaatattgaaatccgtgattcagacctaaatgcttttgctatttactgactgttttacatcgtcatgtattttctccttctttacgactcatgtagatttgtcttgagaacaagattccaatacataatggcatattgtgcttaagtgcgaagaatataagtatcatggggggagttgtccaatcattgtatgaagagtggcagatgaaccagaaattctcagggttatctcgttcatccttgaggttgtctcaaaatgatgatggagttggacctccaccatttgagaagttagatgttgaagcacgtcctagtaggacatcccgttctcaaacctattctggtaattgttctgtcctctctctctctctctctctctctctctcacacacacacacacacacacacaccccttacccttagttatgtccactgtaaagttggcatttatgcgtggcagttgttatatatataaaggtaccaagggtttgaattcgattctcctggtgaaatctatatgcatgaattaagatgttcagaactatttcctctaaacgagggtgttccttttgggtgcaatatgggtgattatcagttgtgttactcactagtaagattttccctgtgttggaatctgactggagattattgtcaagtcctgcaaaattaaacaaataacattatttggataaaaaatactctttattctgaaaaacatggagctgaactgcacttttgcatgactttagttggaaaacctgatctgcatctggttattatgctgacaatatatttggattagcaagtgaatgtgtttttgacatacaaattacttcctttttttgtgtatatatggagttcatattgcttgtttccgtgacttgtggtccacttggactcctttcttatgtcatagcagataataaggctaggaaaccggaagtcggtcgtcagaatgtgtcagttagttccagtggcaaaccagtcaatgagagttcaagtgatgagaacaaagagtctgcagttgaacccaaacaatctatttcagatggcagaccaaaagagggttggcttccattcaaaatatttatatatatagtatattggtggcagttggttacaaaccttttgctttggcgttgcagtcagtgaagctattcctgttcaaaaccaagccactgcacagaagcttctgcagaaaatgacccaggctgcgcccgaagacagatatggtcggggccatagattcaagggtaaaggcaggcaagaagatactccagtatttaccctcgatgaatgggagaagcgaaaatccgctggtttgaagtccacagcacaaagctacatcgacgataccagccgagacgaggagctggcaaggcagctccaggagcaactagatcttgaagactcctatgtcggttcaacttccctgatcagaacccctttgtgtttcaaaacttccattaccgccattccaagaatgttgattcccatggcattgtgctattttgcagggagtgccagagagttcagacgcagatcgtttgcggatgagcatgttcagcttcagcggtcctgaagaaacgggaggcgggagaagagattttcgagggcgaggacgggggagaggaaggggccgaggacgagggcgagggcgaggcaggggaagattttagcccaatccaaacatccaatggcagtggcaatagcagttgtggtagaccaagtcatgttctttcctctggttcccttcagatgatgcttagctaaaagctaatgtctcaattcagaaacaacatgtactgtacactatcctggatagatttttagttttttgttcacagatgcatggaatcagcatatgattaggcccttttttgacatagctatggattcttttttttttttttgagcttggtattcctaactccacaaatttatagatctagacctgtgatctcgttgataacatttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0178100, RefSeq:Os01g0178100