Difference between revisions of "Os01g0198000"
(Created page with "{{JaponicaGene|
GeneName = Os01g0198000|
Description = RNA dependent RNA polymerase family protein|
Version = NM_001048839.1 GI:115435091 GeneID:4327336|
Length = 9866 bp|...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0198000| | GeneName = Os01g0198000| | ||
Revision as of 18:46, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0198000 |
|---|---|
| Description |
RNA dependent RNA polymerase family protein |
| Version |
NM_001048839.1 GI:115435091 GeneID:4327336 |
| Length |
9866 bp |
| Definition |
Oryza sativa Japonica Group Os01g0198000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:5306415..5316280 |
| Sequence Coding Region |
5306754..5307008,5307107..5307279,5308223..5308370,5309197..5309356,5309694..5309839 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:5306415..5316280 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:5306415..5316280 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggtctaacaacaccactgaatatcctcttcttattcaactccgcctgttctacaatggatctgctgtaaagggaacagtcctagttgacaagcggcttcctcctaggactatacatatccgaccatcaatgttaaaaataaaaacttatccagaattatctggtgtccaatctgtcaactcattggacatagtctctgcacgaaatgccaagaaaagtctatctggggttcagtccgtgaattcttttgaaatagtctctacaagcaatcgatcaggaaggacattcacatcaaataatttaattgcattacttcactatggaggagttccagaagaattctttatggagcttctgcagactgcgattgaagaggctgacaatgctcgttttgattatgctggcgcactgaacattgcattcaactatgctgacatggaagattcaatgccagcacggatgattctttccggaatcccactagaagagtcgtacttgcaatctaggctggatttcttgtctctactggaaagaaaaggaatcaagaatggaaagataccaattgatgactgctattatttgatgggtactgcagaccctacaggaaaacttggacctaatgaagtctgcgtgatacttgattatggccaagtttctggagatgttcttgtgtataaatatcctggcttacatcctggtgatatacatgtcttgaaggcaacatatagtagcgacatagagaaggttgtgggaaattctaaacatgcgatactcttccctactactggacaacggtctttggctgatgagatggccaatagtgattttgatggtgacatctactgggtctcattaaacccaaagctgttagaacattttaaaccttcgaaaccatgggttccagctattacaccaaatgggaccaagcaaaagggacccgaggattttaatgaatccgagcttgaaagagtgctatttcatgagttcttgaaaacaagatttgcacctagttatgcgcgtgctacggcagctactaactggttagtatatatggatcggctattaactgtttcacttgacgaaagtgaaaagaaactaattgagaaaaagatgctcaagttagttgacctttattatttggctttggatgctccaaagatggggaacaaggtcaatattccacgtgatctaatggtaaaacaatacccccacttcatggaccgcagtccttcgtaccattcgtcgtccatacttggaaaaatctatgataaagcaggtgatccaaaaccgctgcgatctgataatgttcaaccaaccagtatatcatcgctcccatgtttcgcggagagagacgtgcctccagcaatcaagcaactctggcaacaccgctataacgagtacttggctgatagttcacttctctatgccgaagaggcggatgaagaagaaaagaagataaagtttcaggaactctatgaaaagtacaagcatttgctctacggtgcatctgaatttgaagagacaccgagggacctcgacgacgtgttctccgaggcctgtgcaatctaccagatcgcgtatgagaaagcacggtctgccaacaacgtcgccagatgtggcttcgcttggaaagttgccggccgtgcattgtgccatttctacacggtcaagaatgagggtaacgctgtggtttgctcgctccaacttctccgcaacttcagatttaccaagaagtaccgcaagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MGSNNTTEYPLLIQLRLFYNGSAVKGTVLVDKRLPPRTIHIRPS MLKIKTYPELSGVQSVNSLDIVSARNAKKSLSGVQSVNSFEIVSTSNRSGRTFTSNNL IALLHYGGVPEEFFMELLQTAIEEADNARFDYAGALNIAFNYADMEDSMPARMILSGI PLEESYLQSRLDFLSLLERKGIKNGKIPIDDCYYLMGTADPTGKLGPNEVCVILDYGQ VSGDVLVYKYPGLHPGDIHVLKATYSSDIEKVVGNSKHAILFPTTGQRSLADEMANSD FDGDIYWVSLNPKLLEHFKPSKPWVPAITPNGTKQKGPEDFNESELERVLFHEFLKTR FAPSYARATAATNWLVYMDRLLTVSLDESEKKLIEKKMLKLVDLYYLALDAPKMGNKV NIPRDLMVKQYPHFMDRSPSYHSSSILGKIYDKAGDPKPLRSDNVQPTSISSLPCFAE RDVPPAIKQLWQHRYNEYLADSSLLYAEEADEEEKKIKFQELYEKYKHLLYGASEFEE TPRDLDDVFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFYTVKNEGNAVVC SLQLLRNFRFTKKYRK</aaseq> |
| Gene Sequence |
<dnaseqindica>9273..9527#9002..9174#7911..8058#6925..7084#6442..6587#3574..3799#2407..2629#2079..2227#767..936#146..217#34..60#caggacattgtggattgtgctgcaagcaaattgatggggtctaacaacaccactgaatatgtattgtattaactataagatgttctgatttaccccttttctgttttttctatgtttgttattcttatctattttatttttctagcctcttcttattcaactccgcctgttctacaatggatctgctgtaaagggaacagtcctagttgacaagcgggtatgcactgttttctaagacaattagtttgtaagcaggtttggtatcaaaataatttcttcaggattacctctttattccaatcttggttcatagttgcttgaacatctatatattagcgccttccatatgtttgtgccgtacaatcggagattgtctagtacgggtcttgcaatttaatttcataattttttatttattttttagaacacgcaggagaatttcataatatatgattatgtaaaagtagtatacaagaagagccgtatttatccgtgcttcattcaggataggtgtgctatttcttgcatctcatcatttcctaagaccgcctgatcatttctttgtttgttcatgttgacataatctttgctgatatcctcttattgtcatagttgcactggccgagtggccttcactgtcttcaccaatatatgcattgtttacataattttgaagtgtacagatcatgtcctttttctatcttatcttgactgaccttatatcttgagtgtactttataagaaataataaagtctcctgttgcagcttcctcctaggactatacatatccgaccatcaatgttaaaaataaaaacttatccagaattatctggtgtccaatctgtcaactcattggacatagtctctgcacgaaatgccaagaaaagtctatctggggttcagtccgtgaattcttttgaaatagtctctacaaggtatgccaaatatctgagttgcattgctatgttaggtatggtgaataatggcttaacacatattaatgctttgtattgcatgcctacatctttttagatcctctgcagagtataattatgctatcaagtagcattattttcatccctttcgtttttttagttatacgtcacgcatcacgtgtcatctttcgtaagtgtggttgaagccagaaactttgagatgttagttttgcctacggtcgctgttagttttttttgagtatttccagtgcatcctcttttaggcaacgcaaatggccatgaaaaactgcaaacaaggaaaacactggctttgcaattcatgatataatcaggcatgtacgaaatttcagcttaaaatccatgatgtgctaggataaacacagaggacaaattttggtgaattgtagatctctctctctctctctcttctctaaagcccaggagaattgtgcttcatttcattaagacggaaacaaaaaatatataagaaaaataattaaaaaaatggtgaattgtatctctctctctctctatccagatttcctatacggcagaatgaattttgatttgaaaatttgatgctgatagattgattttttgtcaaggttgccattgccattcttcttttccagagtttttcaggaccatccacacaacccacccagatatatttttcccaatttctgctacagttgctatgaggtggcataacttggaaatcagaacaacaaaatacgtttgatgtgttagatgtgaaactcacttttttttttctataaataggattacttgcctttgcttagtaatttgagtttaggtttttggatgagttgttggtacatgaaactcagatgtccaaaggaacgaactctgcatttaaatcattgtggtatttgggattttgggtgggctggtggccagacttggaggttccttactgtggtttaagtgctgtcacatgtctaatcctcatggttggggccggttaggtagaggcaggagggagagtaaagctgagctcattaggtaggtgtgtaaggggtagtaaagctttttgattggcaacaggcagtcagttctattttttgttcacagtaagtaatatcatttctttttctcagcaatcgatcaggaaggacattcacatcaaataatttaattgcattacttcactatggaggagttccagaagaattctttatggagcttctgcagactgcgattgaagaggctgacaatgctcgttttgattatgctggcgcactgaacagttagttcgaactaccctcattgcattgcactgtgttctgtacaatttgtatatatgtgcttcttcattctgtagaacctgtactcatcttactagttgtaatagagttactattttctttatatttttcagtcacctgtccgtgtttgatccggactaatattctcatgttcttgcagttgcattcaactatgctgacatggaagattcaatgccagcacggatgattctttccggaatcccactagaagagtcgtacttgcaatctaggctggatttcttgtctctactggaaagaaaaggaatcaagaatggaaagataccaattgatgactgctattatttgatgggtactgcagaccctacaggaaaacttggacctaatgaagtctgcgtgatactgttagtaatggaaatactcttttgcttcttcttggtgtttgagtgtgtgtttttttgttatgcttcagtgatcctttgttaccacataagataggagtatcattatccaccatgggcatcattggaactactttaatgtcttacagtcttctttagttgtaacgcaccaacattaccatttttcttactatttacaatcctcaattttgaatcacaactcaaaggttagattggttggcatgtattctcttttcgcaaccggactgtattttttattcaaactatccgaaaatagtggcaacaatattggttgcaattgtgaattttgtcagcaaatggagtctaaagaaagtattgaactgacaacataagatcataaatacatgtcatgtatttggaccctcgagactttaatgccattctttagttcattcaacctaattttgaatttcttgagtatatctgtatatggccttttttagctcagtaatttgatctgtttaattgtttttaatagttaggaaaaaaaattctaccaacagatactactgtttttcaatagatgacgacattgattattgatagaacgtttgaccattcatcttattaaaaaatttagtgtaaataacgaaaatataattcatgcttaaagtttttttaatgataaaacaacttgcaacaaaataaatgacacttgtataatttttttgaaaaagaagaatggtcaaatgtcatgccaaaagtcaatgatgtcagctattaaaaaatggggagagtatattggattacgaaaaggggtttgaatttgccaaagataataactttgttctttgctatatatattccttgcataaatgtgcatcaatatacaagtattaatttgtagcgtgcctgttatgttttgggtctttctttacttatttgctttatatgtggttaaacagtgattatggccaagtttctggagatgttcttgtgtataaatatcctggcttacatcctggtgatatacatgtcttgaaggcaacatatagtagcgacatagagaaggttgtgggaaattctaaacatgcgatactcttccctactactggacaacggtctttggctgatgagatggccaatagtgattttgatggtgacatctactgggtctcattaaacccaaaggtatgttaattcctgattgacattttaccgtgaagtttattggaaatcatcgtcttgggagatgcacctaatattgtttttgtgcttgattatcttttatggtcagcaaaatccctgacagagttttgctcagttgcccctagtccacagcgtagttgttccattcatacagcagttatgctactttacccatggtctatgtcgattgtatttatccagtaatgctcttggaaatgatctgttctttataagagaagtgtccgatgttataactccaggaaaaatggctctttcgccaaacctgaggagctaatttggtcactgcacccaaaccaaatgatattaaatgtcatagctcctttgcttttagaagaattcagttattagtatgcttaggttttaatgaggaaaaggcttgttttacaacattaacctcaaacctcaaaagtagacactattcaaaatctggacgatcaaaatcattcactttataccttagcctgaatcggattgtttttacatgacattcattaaggtggcagtaagggccaaggttgaaattatttttgaatttttggaattagtgagttgacataaaaaatatggacaaattctttagtcgcaccttggagtatagttagtctcaagtgaaacagagtatattttagtcagtgaaatgaaaattggcttatttagttttgaacacacctttttccagatgcttatactttatttttctcgtactaaattttctaggctatatatacaccataatattattgagaattttccagaactgattcaggtgttttctgattctgaatgttaaaaaatatacaccaggtataaatggtttttgaattttttatgataactaaatgacttaaattttctttttgattggttgttgggagtattgaaaacttggataaattagtcgaacatttatataaatttgtaggtatttattttttaacattatttttgaagggccagttatactttatctaggtccactgtactggttagaggtttccagaacgttttgaaatagtttactaagtcagtttaaaattggttcggccttgggtgacatcgtcatgttgccaaaacaggtctgcatttggggtgaacttgaaaggtgattggttttgaagttcagggtggtgtttaagaccagtaaagtccacttgggaaaatattttctcgtaaacgcaggagagaaaaaaaatccatttcattaagaagaagtataacacacttacaagttacaaacgagggtttacgaaaaccctcccacaaaaaacacaccacggaaggtgacgcacgaccacaccttcaaggacaacctagctgcccgaggcaagcaacctacagaggaactcttggagcgcatgctctccagctagacaccacaaactagcctcggttgtggtggtggactcacaacctacagaggacttgatccattgaacatgtaatcattctggtctttccaaatctcccaatctactacgataatcaacgagttcaaccccttacgctgctccttaggaatctccttgacaaccttccaccaccatcctgaaaaatgggatactgaaaggctgaggggccgcatccaccaatcccaatttaagatcaaggtccatacttttcctggaaaagacacatgagacaagaatatgcttcatggtttcatcctcttgatgacataggccaggtgtggtaagccacacttggctagacggtctgatgtcgaacatcgattgtcgactgccaatcacaaggaaaaattatgttgtggaggaacccaacttctctaaattcgctcccaagttgcaaacttgattgataagtaagcattgtatgcgacttacttgtgtagaacttgtaagcttctatctatgctcatccagaacatcttgttgcaagattatcccatccaccaagtcccaaatatgtagatactcacaaataacctgaattgtgagttctttaatatcagccacccatatcctattaaccaattcctttgccacagtgcgttgcttccttactcttcggggaattgtctcaagaaggttagggtccaattcagccaatgttttgcgcagccatatatcagtccagaacttggtgttctccccattaccaattatagtttccgtagctacgtagaagagcgcatgaacattgtgacttgtgagatacttggataggcaagctgacccatggtctagaagaatcaattatttgaagcctttctaggttatgtatgtcaagaccacaatactgtattggccggcaaacatgttcccaagacaaaagacagttgctttatcctgtcctttccaaagaaatcctctgcttttcttataatagctttgaacgcccatttgggtggatccatagccatcttaaggtagatagggtcctagggtagctgtttttttagttatgccatgtttgctttttgttgcaaaattgtgcatcgctgtttcattgtgtctttgcattgtttcactatatgtttgcttattattcttgcatgtatatggttttgatatataacagcacattctctcttttgagcttttcaaagattattgctgctctgataataaaaatggtcttttcagctgttagaacattttaaaccttcgaaaccatgggttccagctattacaccaaatgggaccaagcaaaagggacccgaggattttaatgaatccgagcttgaaagagtgctatttcatgagttcttgaaaacaagatttgcacctaggtattaataccaagctcagtttttctaatgtatatttttcattaggaaaccatttctctactgtaaagaaatttacctcatttaacttctagtatatacaacttattgaggtgttcaatacttcaatggatgtcctcccatgcgccaatgatgatcccttgaccgaattcaatatttttataactacaagtgcttgggtatctttttgtatgaatccgattagtacatttttaaatatctaatgttggtgacaattttctgtagctttttaatatatacaaccttataagttttgtacgatctaacatgagtttggatttcttttttctcctttcagttatgcgcgtgctacggcagctactaactggttagtatatatggatcggctattaactgtttcacttgacgaaagtgaaaagaaactaattgagaaaaagatgctcaagttagttgacctttattatttggctttggatgctccaaagatggggaacaaggttaacttcaatcttgggcttacacaatgtttgttgcaaatgcttttacatggaactgaaatccttattaacttatgctttcatctggtattttgataaacaccggaaagaaggaaacaaattgaaccaagaccttgtagtaataattagttaataacaccttgattaagtttggagtgaaatcaattggactattcttatatacatgtcaacatatgaactgaactacttatgaaatcatactgaggaatgtgctgacaagtcagcctatccaattcaatccatatatgctattgggtagtgcgtgtgaaggttattagttgctattatattctattctggtagtaagtactacaaaattatagcaaaatcagtcatatgcacctgaatgttgctatctgctgtggatacactacactggtcttgatgtacatagttatgaagtcactcttttattaaattaatataccataacatgatgattctttgttccattagttgcgtcttgattgtggttgtgtgaacttttaaccatatgtgttaactctcggtatattagcgtgatttaagaatggatgtaccatgcttagttatgggaataactcgttggtatttcatatttggttcttatatattactttttatatgtacagatgcatggccacatgaatgcatttgacatatgaagcagtcagattaagtaaaattacaagatacaaaatgaaatgtgcaattgcatctttagttatttgaagctttgtaatgtgagggtattgaatgcatattgtgctttaacaatttaagctttgcccaccaatcccgacaggtcaatattccacgtgatctaatggtaaaacaatacccccacttcatggaccgcagtccttcgtaccattcgtcgtccatacttggaaaaatctatgataaagcaggtgatccaaaaccgctgcgatctgataatgttcaaccaaccagtaagttgtctttatttagctcccttcttttttcaatttgtttatctgtagtagggatactccacacattctctctattctacctgtagcacatagtaggctacaacttagcttgagcttgcagcagttaaggtggcaatgaggatgttgatattaataaatatatatttcctccatttcacaatgtaagactttctagcattgtccacattcatttagatgctaatgaatctagacatgtgtatgtgtttagattcattagcatctatatgtactccctccgtcccataatataagggattttgagtttttgcttgcactgtttgaccactcattttattaaaaaaatttggaattattatttatttttttgggacttactttattatccaaagtactttaagcacaacttttcgttttttatatttgcataaattttttgaataagatgagtggtcaaacaatacaaacaaaaactcaaaatcccttatattatgggacagagggagtatattggtaatgctagaaagttttacattgtgaaacggagggagtatgtgttatcatggaaagagtttaggactctaggtcagttttgtgagactataggatcatattcgtataatttatatgtaaaattaatggagaacaattacatctattctaataagttgtctgtgtataacccatggtatgctgtatgtcatcactttttttttctatttaactttcaaaaacaaacgctgcaaaaaattttggccatgccatccgatgtggtgtgcttcgcaacatttagaacaactcatgattttggcacagaacacggttgatgtgaattgtgatgtggtgtcacaagcaggtttcatatatttgatgagacaagtactttatgaatgttctctgtaacatgacattccttttctcttttgtttttgataataaggtatatcatcgctcccatgtttcgcggagagagacgtgcctccagcaatcaagcaactctggcaacaccgctataacgagtacttggctgatagttcacttctctatgccgaagaggcggatgaagaagaaaagaagataaagtttcaggaactctatgaaaagtacaagcatgtgagtgtcctgtattcttttgaataccagctttttttttcctaatggttggaaaacagcttcagagttctgacccaatcgctcttgccaacattcagttgctctacggtgcatctgaatttgaagagacaccgagggacctcgacgacgtgttctccgaggcctgtgcaatctaccagatcgcgtatgagaaagcacggtctgccaacaacgtcgccagatgtggcttcgcttggaaagttgccggccgtgcattgtgccatttctacacggtcaagaatgagggtaacgctgtggtttgctcgctccaacttctccgcaacttcagatttaccaagaagtaccgcaagtgaagtagcatcgcatttagggatagttaatttgtatgaagtttggcgtatgtagtattgtaacagcaatataggagcaggagcggactaataaggacttcttaagctgatggtttagtaggaaaatgtcaggacagactttataactaagctgatgggcctattaacatggctgcttgaagtgaacacaagcagtcaagctaaagattgctacgttagctctggaatcatttcagcatgcatgcatgcatcatgtatcactgaacaaatgcacattcagagcttgcatgactgacatgtgaagtctaaatgaaatatcaagagcttgcatattcagagtgg</dnaseqindica> |
| External Link(s) |
