Difference between revisions of "Os01g0227300"

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(Created page with "{{JaponicaGene| GeneName = Os01g0227300| Description = Similar to RAB7D| Version = NM_001049005.1 GI:115435423 GeneID:4327180| Length = 3533 bp| Definition = Oryza sativa...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0227300|
 
GeneName = Os01g0227300|

Revision as of 18:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0227300

Description

Similar to RAB7D

Version

NM_001049005.1 GI:115435423 GeneID:4327180

Length

3533 bp

Definition

Oryza sativa Japonica Group Os01g0227300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7042992..7046524

Sequence Coding Region

7043110..7043162,7043289..7043315,7043441..7043540,7045090..7045236,7045322..7045402
,7045489..7045634,7046010..7046079

Expression

GEO Profiles:Os01g0227300

Genome Context

<gbrowseImage1> name=NC_008394:7042992..7046524 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7042992..7046524 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgcgcaggcgaatgctcctcaaggtcatcatcctcggtgacagcggggtcgggaagacgtctctgatgaaccagtacgtgaacaagaagttcagcaatcagtacaaagcgacgatcggcgcggatttcctgaccaaggaggtgcagatcgacgaccggctcttcacattgcagatttgggacacagcgggacaggagcgatttcagagtcttggtgtggcattttaccggggagctgactgctgtgttcttgtatatgatgtcaatgttaccaagtcatttgaaaggctcaacagctggcgtgaggaattcctaattcaagctagcccatcagatccagagaatttcccttttgttgtacttggaaacaaaattgatgttgatggtggtaatagccggactgtttctgagaagaaagctaaagcttggtgtgcttctaagggaaacatcccttattttgagacatctgctaaagaaggcttcaacgtggaggctgcttttgagtgtatagcaaggaatgctatcaagaatgaaccggaagaggagatatatcttcctgatacaattgatgttggaggtgctggaaggcaacagcgctcgtcaggctgtgaatgctag</cdnaseq>

Protein Sequence

<aaseq>MASRRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD FLTKEVQIDDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSW REEFLIQASPSDPENFPFVVLGNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAK EGFNVEAAFECIARNAIKNEPEEEIYLPDTIDVGGAGRQQRSSGCEC</aaseq>

Gene Sequence

<dnaseqindica>119..171#298..324#450..549#2099..2245#2331..2411#2498..2643#3019..3088#aatcccaaagcaaagagaagcgcaaagatcatctctttgcttctcgccttctcctcctcctcctcttctccctcctcgtgctccgcccgatccgtccgccgcctccagatccgcgcccatggcgtcgcgcaggcgaatgctcctcaaggtcatcatcctcggtgacagcgggtgcgaaaaagcaaaaaaaatcccccaccttttcgttcaatttctactgggggatattctttctgggcgaaatttattctgtttctctgatcgctgatgcgtctcttttttttttctcgttggcagggtcgggaagacgtctctgatgaaccagtaagatcaagggggcgcaatcttgcgttgtccgattcgtcaaatttgagggtttttttaggcgttgtttgaagggggacttcgcgatgttgaatgatttgggtgattttgtttttgttgttcaggtacgtgaacaagaagttcagcaatcagtacaaagcgacgatcggcgcggatttcctgaccaaggaggtgcagatcgacgaccggctcttcacattgcaggttcggtctaatctgctttcccagaatcacttcgcagcttcatcgcagctggattttggtgcgcggtgatagtttgttttggggggattattggggtgcttagatctttgcagataagtaggggaattggggattagggcgtgatgcacatgcaccgttgactgattgtggtcggaattgcttttttgccaaatcgtgcagacctgatttagcttgaccgtctactagtactgtaggtttggtctactagacaacaatggattcagataatattgggggaacagtaaaatcgttttgctcaaaagaaaaaatattttgcttgtgacagttagagtttaggtttcatgtaattattttgcttggtactcttgttttattttagtgtgagatgtgagatacctgtgcaaccatcatgtaattgcttattggagacgttaatgagatcacaaaagatgtaaaacacaaatatgacagaagggatagagcggttactagaaaattgtttttattccactctatttacgcagtttggaagccatattgcatagctcctttcataagctacaatgaggattatgttacgattgcataagtacatcaagttatatctagttcagtactgcattttcggttgctggttgtacaatggtacaatctctcagggatgatgttttcttagcacggtattgcttcctaatgtaagttactagtgctagtgtctgggattctgtaccacctgtatcagggattctttattactttttattgtttgtgcaagaactgcagttggatgggacaataagttgtaccttacgtctcctccctggttgtctgacaatgtgttgttcccctcgtgaaaagcgagtactattctgttctattccctctatcccaaaatataaggacttctagattttttcttgagagagattaatgatgaagggaaaagactatgatgctcctcattaaatgttgggtgattggggagtgggaaggtggtttggggtaaaattgggtgaaaattaaatgagcgttagttggtgggagaagtagtactatggaagtccttatattttgagacaaatttcaaacgcttgaagatatgttgggacagagggagtagtaaatattatattacattattaattggcaaatgcttttctaagacaaaatcaactgcagtagagaatcatcttgactatgtggaactaatgataccctcactttacagcaagttggagaaaatatccacacccataatgctctttgatagtagtccatcagtgccaaaaattatattcactttcccacatttattggaacaaagactgtggttttcgatttgtatctaactcgtaaatcagcaaagtaactccaacgtttgctgttatagctcaatacctgataattattaccaatatctgctggtttaagtgttataaatcatagaaatactagaatgtatggcaatcaaagtaataccttgtcatttgtcaaacagtaattctgtctacatttacgctaatacttgtgtttacctggaacttagatttgggacacagcgggacaggagcgatttcagagtcttggtgtggcattttaccggggagctgactgctgtgttcttgtatatgatgtcaatgttaccaagtcatttgaaaggctcaacagctggcgtgaggaattcctaattcaagtaagtagcttacttatcgattacccaaaattccaaatgtactgcaatctgtttattgaaagttgaatcattattctcaatgcaggctagcccatcagatccagagaatttcccttttgttgtacttggaaacaaaattgatgttgatggtggtaatagccggactgtgagtatttgtcctcatagaagtgcctttagcctctgatttcctgatttgcattgtgcttttcttaacctagttgttcttcccaggtttctgagaagaaagctaaagcttggtgtgcttctaagggaaacatcccttattttgagacatctgctaaagaaggcttcaacgtggaggctgcttttgagtgtatagcaaggaatgctatcaagaatgaaccggaagaggagatgtaagttaattattgccctgtttgaatctgatgaagatgaagatttaagtacgcacacgtaaaacgagaaagccattagcacatgattaattaagttttaattattttaaacttgaaaaattggatttatttgatattcagagcaacttctatataaaaagatttcgcatgaaatatactgtttagcagtttgaaaagcgttgctaatggaaatcgaggtaaaatttgtatcttgcagcctcccagtagaaacatcaattttaaaaaaactcaattctttttcctgataaggggagcatttagaagtactaacgcagagatgaactacaaagtgcaaaccatgccgttcaatgacactttgctataattttgtagatatcttcctgatacaattgatgttggaggtgctggaaggcaacagcgctcgtcaggctgtgaatgctagaagatatggcaccagcgatatcgccagttgattctaccggatcggtgtagatcatcatcctcacctcttccactgtgtgatatctttagtttgaaagcctctatctatgtccaatgctacatattgtttttttagtgctccaacataattggagaagattcatttgtaactgtttttactcctacctttgtatctgctagatgctagagttgggatacctttttagtctttctacccttctgtttgattgctgcagtgcacatatcttttctgtttgattgcttcagtgcatatctggagagaccaaaacatgttctgtgaaagcttgtaaattgacagaacaacctatcaatctggttctgttctctgcccattttgatggtagagcgtgccagatctgtatctatatggcttgctacttgctaatacaatccttccattatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0227300, RefSeq:Os01g0227300