Difference between revisions of "Os01g0229200"
(Created page with "{{JaponicaGene|
GeneName = Os01g0229200|
Description = VHS domain containing protein|
Version = NM_001049019.1 GI:115435451 GeneID:4325877|
Length = 8092 bp|
Definition =...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0229200| | GeneName = Os01g0229200| | ||
Revision as of 18:47, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0229200 |
|---|---|
| Description |
VHS domain containing protein |
| Version |
NM_001049019.1 GI:115435451 GeneID:4325877 |
| Length |
8092 bp |
| Definition |
Oryza sativa Japonica Group Os01g0229200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:7128216..7136307 |
| Sequence Coding Region |
7128377..7128477,7129924..7130002,7130450..7130548,7130634..7130747,7130940..7131082 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:7128216..7136307 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:7128216..7136307 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgggctccatggtggaccgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgacatctgcaaccgcgaccccgggcaatcaaaagatgttgttaaggcactcaagaaaaggattgggcacaaaaatccaaaagtccaaattcttgcgctgactctcttggaaactgcaatcaagaactgtggggatatattccacatgcatgttgcagaaagagatgtgttgcatgagatggtgaagatagtgaagaaaaagtctgatcagaatgtcaaagagaaggtattaactatgatagatacatggcaagaagcattcgggggaccacgtgcaagatatccacagtactatgcagcgtaccatgacttggtgcgtgctggagctgcatttccaaagagatctgatcgacctgcaccattgtttaatggccagtctccagcaggcagaaatatgcgtagtcctgatcagcaggatgaagctgaatcgtctgctggaaatgattttcctgctttgagcatgtcagagattcagaatgctcgtggtataatggatgtgctagccgagatgctaaatgctttagaccctggaaacagagagggactaaggcaggaggtaattgtggagcttgttgatcagtgtcgcacttacaagcagagagtggtactactagttaatgctaccgcggatgaggaacttatgtcacaagggcttgcactgaatgatgacttgcaacgtgttctcgcaaaacacgatgcaattgctgcaggcattgcagttcgagtggagaagaaacctaagtctctgcaggcacttgtagacactgaggattctatgaaccaagactctaagaaagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagaaccaagccaaagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgtcaaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctgggatgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtagttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaacacaaccaataacattgccaaacctgcggatccctttggtgttaattctagctctactcttcctggatcacagccatacaatgctccaacccagcatcctctgcaagcacagcagcagcctcagcaggtgggcctctatcctaatgggggagctgtgaaccctggaacatcataccccacaagttctgggtggaatggtcaaattgcgaacaatgcgacgcctccagcgcagcaaacagtgaattatgatgagcaaagtggagcccttcccccacctccttgggaagctcagtcagcgccaagcggcgacatgtcaaatggcggtatgcagtctcacccggtgtcaaacggccaatttggaggtatgccatctctcccaacaccatcaaaccagatgggtgggatgcagcccttgcacccgcagatgaaccagatgggaggtccacaagcccaccaaatgtacaacaaccaacaaccgggagccatgcaacccagccaacctgctgtaacccagatgcaatcaggctttgcgaaccaattcggttcgatgccaccacactccatgccaggaatgcaattccccgggatgcaaccttcgccgatgccaggagcgcagccagtcatgatgtatgcgcaaccgatgatgatgccgggtatgcagtttgcagccatgccgcaaccacgaatgtatggcccccagatgtcccagtaccggcttgtgcagcagcaagcggcacaatactacagcaacagccaagggaggccaacatactacgctggtatgaatgacctctcccagaaaatgtatggcctctccatgcaagacagctcttacatggggatgaacagctcgccctactctacaacaccttcatcatcatcttccatggggcaaccatcgaagcctgaggacaagctgtttggagatcttcttagcattgccaaaacaaagcagaacaaggcttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAGSMVDRATSDMLIGPDWAKNMEICDICNRDPGQSKDVVKALK KRIGHKNPKVQILALTLLETAIKNCGDIFHMHVAERDVLHEMVKIVKKKSDQNVKEKV LTMIDTWQEAFGGPRARYPQYYAAYHDLVRAGAAFPKRSDRPAPLFNGQSPAGRNMRS PDQQDEAESSAGNDFPALSMSEIQNARGIMDVLAEMLNALDPGNREGLRQEVIVELVD QCRTYKQRVVLLVNATADEELMSQGLALNDDLQRVLAKHDAIAAGIAVRVEKKPKSLQ ALVDTEDSMNQDSKKEQALVDIEDPTTQETNKEPSQSASVQSPFEQLALPAPPVSNGS ATPAPKSDLGVDLLSWDDNPSTTENSLALVPVTDPVVDSTPSQNALAIVDIFSQNNTT NNIAKPADPFGVNSSSTLPGSQPYNAPTQHPLQAQQQPQQVGLYPNGGAVNPGTSYPT SSGWNGQIANNATPPAQQTVNYDEQSGALPPPPWEAQSAPSGDMSNGGMQSHPVSNGQ FGGMPSLPTPSNQMGGMQPLHPQMNQMGGPQAHQMYNNQQPGAMQPSQPAVTQMQSGF ANQFGSMPPHSMPGMQFPGMQPSPMPGAQPVMMYAQPMMMPGMQFAAMPQPRMYGPQM SQYRLVQQQAAQYYSNSQGRPTYYAGMNDLSQKMYGLSMQDSSYMGMNSSPYSTTPSS SSSMGQPSKPEDKLFGDLLSIAKTKQNKA</aaseq> |
| Gene Sequence |
<dnaseqindica>162..262#1709..1787#2235..2333#2419..2532#2725..2867#3481..3562#4190..4275#4644..4877#6449..6927#7074..7792#ggaggccaatccgctcgctcgctcgctcgccggcgacccgaatccggccaggagggggggcggctggccggagctagggtgggtgggtggttggccgcaccaccttcctccgcgccgccggagcgtgggcagcggcggcggccggtgggaggaggggaagcatggcgggctccatggtggaccgggcgaccagcgacatgctcatcgggcccgactgggccaagaacatggagatctgcgacatctgcaaccgcgaccccgggtacgtgtgctcctcttgatcccgtggcggtggcgggctgcctgatcttgatccgcggcgagcggtggtggtggtggtggtggtgtggtttctcgttgggatgatggggcacagcggcgcgggaattggatccttctattctgaaaattagaatgcgattggggggtggtgggtgaatgaatgctagtgctagatgggaggaggagatcaggatttgcggtggcggtggatctggctccgctcgcatcctggttcgccatgaggtctttgattgtgaggaggaagttttggaaatggctagatagaattgctggggattggtgcttgctttgccgttcaattggcttatttggtgaggtgacaagatgatacgctgcagttagatcgcaagagcgtggtggtattcatggattcactggcaaattgctagtggaaccaaccgtaaccgaggagaaaatacgagctaccatatggaataatattgctttcataaacaattttcagtaacctgtgagtttcataacttacgaggtgttcctagtgacacacatactagtagagagagaaaaaaaaagaaactgcagataatatagcaacctaggatggttcgtactccctccatcccacaatatagcaaggtagtagatattattgtgagaaggttgaaaaatagaaatgatgaatgtttgctcgccactgcaacttgactgttttcttcaaacaaatgacaactagcccatttgactcgggatgcagtttgtcagctgctgtaaaaattaggttagcttacattaatcctactaagattagtttagcccaatttttgtgcttggcagctaacaacattaatcaaaattagtgattagatagaggaggaggaggttagctggagagaaaatagaactcagggggttagttaagtgtctccaagattatttggttgtttaaacggctaccccatttattaaccttaaaacctaacaagcacagctttaggataaactgtgaagcattaattgcatattagagtacctttaattccttatcgtaaggcagctacttgagtgctgcttcatgattcacctgcatgcttttaaactagtatttctgtactgctgctgcaacgtatgatctttattagttgaatacttagcatacagctactaacggtagtcattagttgttacaacttacaactaagttagtggtggaggccaccaaaagtttgatgcagttgggctgtttaatgtgtctgctggttttgatgaggcaatgattctgttcctgtctagaggttttatagtttgccttgattcatggtcggttattgtgattggaaaccaaatggttgaggttgactctgaagatgaatatttattgtattgtaaataatttctttcgttttggttcgtcaattattgatgagcaaacatttgtcatgtacaggcaatcaaaagatgttgttaaggcactcaagaaaaggattgggcacaaaaatccaaaagtccaaattcttgcgctgactgtgagtttatcataactttacatcctttttaagagtggtgctaatggtacaagcaatgggaagaatctcttctctgtgtgttttaacatcaagcatatatgtctattgctcagctatatttgtgtgtttattttgttcactaagcactactgttccagtctgtattaatattattgtccaatatttcatgaacatgtgttaatgtaatgatcagttgcaaccatgcaacctgaagcatcattagcacaaaggaacatcatttcataataaacatgtgtgtattaattccttgtccagtccacgaaggtgggagggagatttgatgaggatacaacttattttacttatgcttcattattattttggagatgtatcttgtttaggacaacttgcacaggatctaaaatgaataatatcctgattttttttgggggagctctgtttcagctcttggaaactgcaatcaagaactgtggggatatattccacatgcatgttgcagaaagagatgtgttgcatgagatggtgaagatagtgaagaaaaaggtttgatatgctccatagttttgatctcaagctgttttgttttaatgtcctgaatatgatggcatatgttcttgtcctattacagtctgatcagaatgtcaaagagaaggtattaactatgatagatacatggcaagaagcattcgggggaccacgtgcaagatatccacagtactatgcagcgtaccatgacttggtggtatggttttgaatcccagattggtttatcaagctctgaagttttttcccacactgaattttccatattcagaagtcgttgcattgtttgatcatgtgattaattggttactgatctatctatatttgttagaattaagggggaattcaccttgctgtttgacatagctatcctcctatttcactattgcagcgtgctggagctgcatttccaaagagatctgatcgacctgcaccattgtttaatggccagtctccagcaggcagaaatatgcgtagtcctgatcagcaggatgaagctgaatcgtctgctggaaatgattttcctgctttgaggtgtgctttcatacttttcattttctgatttgataatatcttttcctatatgttctctttactggtttgagattatcacatgaacatgtggaaaactataactattagaagatcactattcactagtcggtacctcctgctgatctgtttagcaaagttgtgtgtaaagtgctatgacaatactagcgtagtacctaactacctgtgaatttcaatggatctcaaataaatatactataaattctaaacttaaaacaaataaatacgccctaaaagaattgcatacagaattcacatcacatcaattgacaccttatacgcacatgtgctgtgcagaggatgtaatcctttatagaagatattacaaataatttgaaaatgtttgtgtaaacccatccacaaaagaatccttgaaagaagggggatagatgaagaacttcatcacaaccaccaagtcactaattcctttggagtaaagttttttttttttccgtctccagtgagaacctttgaataactcatctacttcaccttgctttgcctgctgtttctctaaccttatattctttttctgtcatttgaagtaaaactgaatgtatgcttatattttcagcatgtcagagattcagaatgctcgtggtataatggatgtgctagccgagatgctaaatgctttagaccctggaaacagagaggtaccgataacacttaccttgcttttaaactcaagctgcacaaaaaaaaagcacatctaaatgttagtgtcacaaatacctgttaaagaaaacaatccatcttgttttattttgagaaataactcctgatcttttaatttgagaaatggtcttgttctaaccacataaaacttactatgctgtggagcgtgtttttgcccttacttgcttatgttctataaacatttgagtatatgacacgtcagcctgtagtctatcaaatgttcattgattccaagcagcattacttgaaataccatttgcctggttgccgtgtaccctatattgttatgaaatctatttggtatggtaactaaggtatcgaagcatgaacatggtataccattgttttcatgcttttgataacattcgtatgtgggtttggacacccatatttaaaaatcttagaataaaggagtactccattatattttaaaatccatttattgtggaagaataaacagaagtctaaatggaattttaattcgaggttcaaatctgtacttatatgttccatacttagttacttaacaacctccttttgtgttaggtttactgattttgtttgtctgactactctgtacacagggactaaggcaggaggtaattgtggagcttgttgatcagtgtcgcacttacaagcagagagtggtactactagttaatgctaccgcgtgagtaaatctaatatttggtgaatatagtttttacttctaagatatggatgaagttgactgactgaacttccttgacaaccctggattatgggcatgtgtctgagtagaggatggtaaaaaggatggtctttgtcatttttgtgaattaatctctataacatttcctcctgtgtgagatataatgttatgctcaagaagagctgatcataagaattatcttatcatcttataaagcatttggatccaaatataaaatattcactcatgaaaagctggcaaaagtagcccttggctggcatctgtattatctcatttaactatttattgcaacatatatactaaaattctggtttggccatttacagggatgaggaacttatgtcacaagggcttgcactgaatgatgacttgcaacgtgttctcgcaaaacacgatgcaattgctgcaggcattgcagttcgagtggagaagaaacctaagtctctgcaggcacttgtagacactgaggattctatgaaccaagactctaagaaagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagaaccaagccaaaggttataatcttctcctgtcacatttgcatatttcttatttctaggtaatattgaatgatatcagcccatgtgcgtgcgatttttgtgcataaatgctggaaacaatttttttattagtaattagccattattctttattaacaagtgcttaaacactgtaatatagttcttcagttttggtgatgtacaattgtaccatccaccatgtttctgtgggtatttcaggcttctccttttccattgcagagttctattcttctaaactgctaattatacttggtctaaagaacaaacaagtttgtacattgtaattgatcaatacagtttctgctattggcagcaatttgcccagtgtagtgtagctgtttaggcttgtgaacatatgcacttccagacaacatgttgtcatgtgtataaaatttcctatttatgttcctgataaagccagtatcataaacaccgattaaaatccaaaaagtcatcaccattgctgcttacctccacatatgtacatatattttttgtttatgaacacccctacaagtctgatagtcaatgcatttatacccttgacaagtacttcctccgttacatattataagactttctagcattgctcacattcatatatgttaatgaatctagacatatatgtgtgcctagattcattaacatctatatgaatgtgcgcaatgctagaaagttttataacctgaaacggagatagtactttttttttgtttttatcaacacccctgcaatccattttatcatcaaattataccctggggctaaatttttctcatcttctcactactttctcttgtttaatcataaaaggtcagtggctatatggaagcccaatggcatctacaaatgctagtgacccaaaccactgaacaatcacacccatggctccctttctgcacagtactagtatatcaaaattattaggacatgttggagggtaggtccatatgccagcctatttgcatatgtacatcttatacatggtagccactgtttgcatatgaggagccttggcctgtgactactgactcctcatggtaatcactgtgactactgattggggcccttaactgctacctggtgtggtatcagtttttgttttctacactaaatctacaatccgactgttcttattttacttgaattggtggtattggaaatcgtagtgctgtcttttacaaatttgttgaatatccgttttctgtaacttatggtagagggtgttttggtagcaaacagagcaaactgtggctctcagctctgtaaggtattgtagaactaaaaagatagttgttgagagaaagcacgtaggtagaaccttctctctctaaaataaagataaatgtgcatttcttgaacctagccaaattttatgatccaaactgcatttagtgttgatttgtttgtttctcttggctttcatagtatcactagaccatagtgatgatctatattcgtaactttttttttttgattatttatcatgttttacctggcttctttaataacatctgtttgcatgtgacctgcctttgtaacagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgtcaaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctgggatgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtagttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaacacaaccaataacattgccaaacctgcggatccctttggtgttaattctagctctactcttcctggatcacagccatacaatgctccaacccagcatcctctgcaagcacagcagcagcctcagcaggtgggcctctatcctaatgggggagctgtgaaccctggaacatcataccccacaagttctgggtggaatggtcaaattgcgaacaatgcgacgcctccagcgcagcaaacagtgaattatggtattgcaatttatttatacatttacatttctcaacctttttcctacaccatcatccctatcattggatgtcagaaccacgcatgtccatgcttgtgttctgtttgagctttgaagaaattctgatgggtctcctgaattttgtagatgagcaaagtggagcccttcccccacctccttgggaagctcagtcagcgccaagcggcgacatgtcaaatggcggtatgcagtctcacccggtgtcaaacggccaatttggaggtatgccatctctcccaacaccatcaaaccagatgggtgggatgcagcccttgcacccgcagatgaaccagatgggaggtccacaagcccaccaaatgtacaacaaccaacaaccgggagccatgcaacccagccaacctgctgtaacccagatgcaatcaggctttgcgaaccaattcggttcgatgccaccacactccatgccaggaatgcaattccccgggatgcaaccttcgccgatgccaggagcgcagccagtcatgatgtatgcgcaaccgatgatgatgccgggtatgcagtttgcagccatgccgcaaccacgaatgtatggcccccagatgtcccagtaccggcttgtgcagcagcaagcggcacaatactacagcaacagccaagggaggccaacatactacgctggtatgaatgacctctcccagaaaatgtatggcctctccatgcaagacagctcttacatggggatgaacagctcgccctactctacaacaccttcatcatcatcttccatggggcaaccatcgaagcctgaggacaagctgtttggagatcttcttagcattgccaaaacaaagcagaacaaggcttaatgagaaacaatcaaatggagtattaaaaaaaaagtgtgaagaggtctaatatctcttgtgtaattgttacacatttttttccccacgtggcttgatcatacgctgttgtagcatttgaatgtataatcttgttccggttttgtacgatgcccggccccgattgatttcatttgattcgttatacatacagtaccgtgtgtactgatcacggccgctgagaggatacgctggtaaattaattgatgatctagtataataagcatgtatttttcccccctctgatatactactgtctttaat</dnaseqindica> |
| External Link(s) |
