Difference between revisions of "Os01g0254900"
(Created page with "{{JaponicaGene|
GeneName = Os01g0254900|
Description = Similar to Syntaxin 22 (AtSYP22) (AtVAM3)|
Version = NM_001049155.1 GI:115435723 GeneID:4327713|
Length = 3949 bp|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0254900| | GeneName = Os01g0254900| | ||
Revision as of 18:48, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0254900 |
|---|---|
| Description |
Similar to Syntaxin 22 (AtSYP22) (AtVAM3) |
| Version |
NM_001049155.1 GI:115435723 GeneID:4327713 |
| Length |
3949 bp |
| Definition |
Oryza sativa Japonica Group Os01g0254900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:8474484..8478432 |
| Sequence Coding Region |
8474849..8474914,8475008..8475108,8475228..8475385,8475534..8475608,8476508..8476647 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:8474484..8478432 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:8474484..8478432 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagcttccaggacctggaggcggggaacgcccgcgggctgccgcggaggggcggtggcggcagggcgggcgccgcggccgccggggcgggggcgtcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcggctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggatacacaagacacgtcaacacataacacaactggtgaaggacacatcggagaagcttaaacaagctagcgaggctgatcatcgtgtcgaagtcagcgccagcaaaaagattgctgatgcgaagctagcaaaggatttccaagcagttctgaaagaatttcagaaagctcaacggttagcggtagaaagagaagctgcttatgcacccttcatttctcaagcgggcttgccacaaagctataactcgagcgaggtgaacaatggtgctgataagttggctgagcaacgcacggcgcttctagaatcaagaaggcaagaattagtcttcttggataatgagatcgtgttcaatgaggccgtcattgaggagagggatcagggaatacaagaaattcagcaccaaattactgaagtaaatgaaatcttcaaagatcttgctgttctagtccacgatcaaggacaaatgattgatgacattgacacccatatcgagaatgctgttatagcgactacacaagcaaaaggccaactctctaaggctgctaaaactcagaagtcgaactcttcgctgatatgcttgttgctggttatattcggggtggtcctgctcatagtgataatcgtcctcgcagcctag</cdnaseq> |
| Protein Sequence |
<aaseq>MSFQDLEAGNARGLPRRGGGGRAGAAAAGAGASQAVASGVFQIN TAVSTFQRLVNTLGTPKDTPDLRERIHKTRQHITQLVKDTSEKLKQASEADHRVEVSA SKKIADAKLAKDFQAVLKEFQKAQRLAVEREAAYAPFISQAGLPQSYNSSEVNNGADK LAEQRTALLESRRQELVFLDNEIVFNEAVIEERDQGIQEIQHQITEVNEIFKDLAVLV HDQGQMIDDIDTHIENAVIATTQAKGQLSKAAKTQKSNSSLICLLLVIFGVVLLIVII VLAA</aaseq> |
| Gene Sequence |
<dnaseqindica>3519..3584#3325..3425#3048..3205#2825..2899#1786..1925#1076..1169#182..390#ccccaattccagacgccaacgcgaggtcgacgaaggccacgtctccgactccggctcgatttccaccccccccaaatcctcctccggcgagcggccggccgcgagacaccccggactctcccgcgcggcgattcttcggtaccccgatcggaggaggaggcggcggggagggaggaggaggatgagcttccaggacctggaggcggggaacgcccgcgggctgccgcggaggggcggtggcggcagggcgggcgccgcggccgccggggcgggggcgtcgcaggccgtggcgtcgggggtgttccagatcaacacggcggtgtcgacgttccagcggctggtcaacacgctcggcacgcccaaggacacccccgacctccgcgagaggatgtgaggctccccccgcgccatactctctacctaccccacgtctgtttggttttggtttgatttggagcgggggtcgggggatcgattttggttcgatttggagcgggggattgggggattttgcgatccggggctccgattttggatgcgcgtgatgaattttgggggggaattgtgcggctccgctgcatgatttgcgatctcgattaggttatatgtttatgcggtcgattcgcgtgatgaacctatgtctctcatattatgtgttgcttagggatcgcttctccccttctcttcgtgatatctctcttattacgtgttgcttaggattgcttctcccttctcttcgtgataattatgtattagtgataattagggattcaatttggggagccctgcctgtagtttatctactagcaactcatgtttgggtgatagccgctgaacttaggtagaattgatgaatcatgccattcctggtatatgaatagatccgatggcctcgaataagatgttttctccattcctttctactgaaattgattcaatttatgccatgtatggcctggcatgctgtcttatagtgtagtaacttgtattatgccttaaccctttttctgtactttagactagttatttttttggtttgatgggtcgatttactttctgttggtgttgcttgcagacacaagacacgtcaacacataacacaactggtgaaggacacatcggagaagcttaaacaagctagcgaggctgatcatcgtgtcgaagtcagcgtaagtattctcttgcatctttgtccaagttgcttttttctcaaaacagaattggaactgtttctatcttgtatgtttgaaaccagaattatttcagtactcttcaccttttgcatcaaaatgaaatggaattgcaacatgtgatgctactttttgaaccagaaaaccttcaattttgacattttccttcaaagtacagaagagtgtaataatgcatattggtttggaaactgaacctacccagtccttatattctgactggaaacatcacttctaatttgggcattttttatctgtatcagtcttagttttgcctgactactgtgaacagtgatttgcctcagcacataaaacaaattgttttcttaaatactcaatatgctccagtcatgatattttcaagtgtgttgccatgccactggagaaataatctacaagcagattttagaatcatgtagagatcaaatgtagcatttgcatttcttatatgagctgctttatgtagtattgattgcctatgaatctatgatcattactattttaaggaacatttctatgttccatttttgctgatgtattacacaatgtgtgttgatgacctcgtttggaactacaggccagcaaaaagattgctgatgcgaagctagcaaaggatttccaagcagttctgaaagaatttcagaaagctcaacggttagcggtagaaagagaagctgcttatgcacccttcatttctcaagcgggcttgccacaaaggtagtttgctagtcagctggtgtacttctttctgtaaatacttgcttatttttcttcctggcatcttatgtttttgaacaaaagtgcacttactacaataatataattcatggcatattgtttatcattttcttggtagtgtactaatgctacagcatcctgttacattttacttactctgcagaataattttgttgcatactctctcttgaacaaataaattattctacgtcaagttttaaaaaaatttcatgaaaaaaatattttcagtttgactggacttaacactggattatgttttctgaggtaaatggaataataataacactggattagtgcttttaatctgccaagtgcttgatgaccctaatagttaatgccctggtttattccaacctaatacaataccttctggtgcgcatttacaggatgagcattcatatttgatcctatccaaatagttcgtattgctgttttgatctactgtagcgtataagtttctctgcctgttttacccttaaatatctagcgttttgttcatggtccactttctcagcccccaggccctagctttcaatatcataaattcattttctgactaaacttgcgatgaagtttgtcttattcatagaactcagaataataaaaccactttcaagtgtagcctgtcttcttgggtcttccaagtaaaacagcaaaacattattttcttaaaattatctccattcaatggtactttagatcattgcaaaattttgtacctcacattcattatatgttaattttctgtaataataataacaacatatttttgaggctggtctatgataatatattgtcaaagtttttccagtatgttgtcaacatatgagtaatctaggatggcttgttctttgcagctataactcgagcgaggtgaacaatggtgctgataagttggctgagcaacgcacggcgcttctagaatcaagaaggtgaattgatagtactatttggttatgctttggactatttgttttcgaacatttctataaagtattcacttgttttgaaatgaatgaacaaattcactcctttgcaaatgtgtgaacatgataacctcaatttttttctttactgtaggcaagaattagtcttcttggataatgagatcgtgttcaatgaggccgtcattgaggagagggatcagggaatacaagaaattcagcaccaaattactgaagtaaatgaaatcttcaaagatcttgctgttctagtccacgatcaaggacaaatgattggtatgtggtaccgttggggatgatagatgggattatgtgctatttgatacgttgaagcacgaggctgctcatatatctggtatgttatatctgattgtgtatctcctcctatactgcagatgacattgacacccatatcgagaatgctgttatagcgactacacaagcaaaaggccaactctctaaggctgctaaaactcagaagtcgaactcttcgctggtacttttagactcctttagcactcattaatatatttcactggcactcacttcaacatgtgaaacattgttcgattctcattttatgttgcagatatgcttgttgctggttatattcggggtggtcctgctcatagtgataatcgtcctcgcagcctaggcagcagcctggaagaacatgggactcctagatctggttgagcttagagcgaagtattccttcctgatttaattttgctgtgaagtcgggaatgtatcctgatctcctgcctggaggagggggttgcgttctggtcttgtgccatggtggtgtatgtgatgatgaatggtgtgtctggaatgcatggtttatatataagtaattaagtataatcgcttggtgtcactctagtgcctcctgccttgctcgctcgcccctgtttatatcttgtgatgtatcgttgagtgagtgttgtaagaacgaggagtttggtctttgcattataatagttgcttaagttggtcagtaaccgtcgcaatttgttg</dnaseqindica> |
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