Difference between revisions of "Os01g0314100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0314100| Description = Catalytic domain of components of various dehydrogenase complexes containing protein| Version = NM_001049405.1 GI:115...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0314100|
 
GeneName = Os01g0314100|

Revision as of 18:49, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0314100

Description

Catalytic domain of components of various dehydrogenase complexes containing protein

Version

NM_001049405.1 GI:115436223 GeneID:4327289

Length

4869 bp

Definition

Oryza sativa Japonica Group Os01g0314100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11946820..11951688

Sequence Coding Region

11947060..11947173,11947267..11947494,11948608..11948696,11949296..11949543,11949638..11950017
,11950109..11950234,11951008..11951151,11951255..11951497

Expression

GEO Profiles:Os01g0314100

Genome Context

<gbrowseImage1> name=NC_008394:11946820..11951688 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:11946820..11951688 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctgtgtactccgcctcgcctcccgctcccgctcccgctccggcctccggcccaccctcgccgccccgcggccgtctccggttccgcctccgccgccgcgggtgggacccacacccgtcgccccctcgccggcgcctctccgcggtctcctcctccccctatccccgctccgcctcgcttcccctgatgccttctcatcgtcgtcgccgtcgcccgcgtggctcctcgacggcctaaattggcggcgggcggggatcgggaggaggtggttcgcgaccgaggcgtccgcggcgtcgacggcggctgagctggtggacgtgcccctggcgcagaccggggaaggcatcgccgagtgcgagctgctgcgctggttcgtcactgagggtgatcaagtagatgaattccagaggctctgtgaagtacagagtgacaaggcaactatcgaaataacaagtcgtttcaaaggaaaagtacatcagattcactttggtcctggtgacattgtgaaggttggtgaaactttactgaagatgatggtgggcgacagccaaactgtatctcatgatagtatagcttcatccactgatcattcacatgcagtggatgctgcaaatccttctggtgaaggcagtgttcctagtggcacactctccacaccagcagttaggcatctagcaaagcagtatgggctcaacataagtgatattcagggaacaggaaaagatggtagagttttgaaagaagatgttctgagttatgctgccagcaagggtctttgcaaagaaccgacatcagctttggaagagaacattgatcaagtggagttactggagggaaggggatcattacccgatgctaactcttatgaagatagaagaatttctctcaggggctaccagaggtcaatggtcaaatcaatgaccctggctgcaaaagtaccacattttcattatctggaggaaataaactgtgatgctcttgtggaacttaaggcatcctttcaaaatgcgaataaagatcatactatcaagcacaccttcctaccattcctcataaagtctctttctaaggcactgagtaaataccctttgttgaacagttgttttgttgaggaaaccaatgaagttattttcaaaggatcccataacattggggtagctatggctacagaacatggattagtggtgccaaacatcaagaatgttcaatcgctttcaatattggagatcacaaaagaattgtcacgtctacatgagatggcatcgcacaacaggctgagcacagaagatattgctggtggaaccataacactaagcaacataggcgccattggtggcaagtttggctctccgcttctcaacttgcctgaagttgccattattgcactcggacgcattcaaaaacttcctcgctttgatgatgatgaaaatgtttatccttcctcaataatcaatgtgactgttggagctgatcaccgagttgttgacggcgccaccgttgcaaggttctgtaatgagtggaaaagccttgtggagaagccagaacggctattgctgcatatgcgatga</cdnaseq>

Protein Sequence

<aaseq>MACVLRLASRSRSRSGLRPTLAAPRPSPVPPPPPRVGPTPVAPS PAPLRGLLLPLSPLRLASPDAFSSSSPSPAWLLDGLNWRRAGIGRRWFATEASAASTA AELVDVPLAQTGEGIAECELLRWFVTEGDQVDEFQRLCEVQSDKATIEITSRFKGKVH QIHFGPGDIVKVGETLLKMMVGDSQTVSHDSIASSTDHSHAVDAANPSGEGSVPSGTL STPAVRHLAKQYGLNISDIQGTGKDGRVLKEDVLSYAASKGLCKEPTSALEENIDQVE LLEGRGSLPDANSYEDRRISLRGYQRSMVKSMTLAAKVPHFHYLEEINCDALVELKAS FQNANKDHTIKHTFLPFLIKSLSKALSKYPLLNSCFVEETNEVIFKGSHNIGVAMATE HGLVVPNIKNVQSLSILEITKELSRLHEMASHNRLSTEDIAGGTITLSNIGAIGGKFG SPLLNLPEVAIIALGRIQKLPRFDDDENVYPSSIINVTVGADHRVVDGATVARFCNEW KSLVEKPERLLLHMR</aaseq>

Gene Sequence

<dnaseqindica>4516..4629#4195..4422#2993..3081#2146..2393#1672..2051#1455..1580#538..681#192..434#gaggagtcccactccctcgctgctccgaagtgtcccgcacttctcgtcttcctcctcgccgtcgtcttccacaaccaccaccgcgccgccgcctaccaatccatccagaccttctcctcccccgccgatgcacacaaatcgccggtgacgtcacgccggtgaagcagcagcactaggagaaggaggagcatatggcctgtgtactccgcctcgcctcccgctcccgctcccgctccggcctccggcccaccctcgccgccccgcggccgtctccggttccgcctccgccgccgcgggtgggacccacacccgtcgccccctcgccggcgcctctccgcggtctcctcctccccctatccccgctccgcctcgcttcccctgatgccttctcatcgtcgtcgccgtcgcccgcgtggctcctcgacggcctaaatgtgcagtagacttccttctctctagacgctagatatcccggttcatgtcaccctgtgcgtcccccctctgatggcggatttggatttttttcacacggtgcagtggcggcgggcggggatcgggaggaggtggttcgcgaccgaggcgtccgcggcgtcgacggcggctgagctggtggacgtgcccctggcgcagaccggggaaggcatcgccgagtgcgagctgctgcgctggttcgtcactgaggtgagcgcagcgcgtcttcatttgttacggctcgctttctattaccttacactacggagttagctactcgcgctaatggagagaccgaccggttcttagtttgatcatgcgattacttgtcgtatattggatttgatgctgcacgatttatttcagtaagcgcgtttggtctgttagtagttaccatgaaaacaattggtacattcagtgaggtgaatttcagttgtcatatgtgttgcgagaatgctgtttcagtgcaatctatgtggtgcattgtatcatacagataacaaggcatgctataaattggctatgaacagacggtcagacgctgttaccatgagcaaatttggtctcctttcctagctggttgttgatttgataaataggatgatgctttggcacaccattcagtacttcagttgcagtattgcacaaagccatgcttgtttttcagtggatgagttcttgctgagtgaataccacaaagtaaacggattagacagttgagcagtgtgagtggaatcttcacaactttcatatccatgtttctggccttgataattaaaataacaaacttgaaaacaactgcaaaaatgcattgatgcctataactcgatttgtaagctgctaagtgaggttcaatgtccaaactagatttgcttctttcaggtcctttaacctcatctcaaattttaggccccctatctgagttctgagatatcaatgctattctggaaatgacttttttttttaactcgttcattttgcagggtgatcaagtagatgaattccagaggctctgtgaagtacagagtgacaaggcaactatcgaaataacaagtcgtttcaaaggaaaagtacatcagattcactttggtcctggtgacattgtgaaggtagctttgggattctttttcaatctcaacagaggtatacttgagttattcgcctgaatttattttgcttaagttaatctgcttatcttaggttggtgaaactttactgaagatgatggtgggcgacagccaaactgtatctcatgatagtatagcttcatccactgatcattcacatgcagtggatgctgcaaatccttctggtgaaggcagtgttcctagtggcacactctccacaccagcagttaggcatctagcaaagcagtatgggctcaacataagtgatattcagggaacaggaaaagatggtagagttttgaaagaagatgttctgagttatgctgccagcaagggtctttgcaaagaaccgacatcagctttggaagagaacattgatcaagtggagttactggagggaaggggatcattacccgatgctaactcttatgaagatagaagaatttctctcaggtatcatgcaagttttcgtgatgggcctactttgatatgttattacagctccagttataactctgacaactgacataaacatttctttctccaggggctaccagaggtcaatggtcaaatcaatgaccctggctgcaaaagtaccacattttcattatctggaggaaataaactgtgatgctcttgtggaacttaaggcatcctttcaaaatgcgaataaagatcatactatcaagcacaccttcctaccattcctcataaagtctctttctaaggcactgagtaaataccctttgttgaacagttgttttgttgaggaaaccaatgaagttattttcaaaggtatgcattttttagtttcttgttacactctgttacctttaatcaaaagaggatcctaaaagtatagttcaagagatccgaggtgcagaagtttatctctcatcagatgatgtcccatttaataatctagcttctcattaaaactgaattataagtaagaaatttatttgttgtgtgtatgccttctcctaaacccctatattatatttgccaaatatggtggtactcatcatcaacccaactcccaataaagaactcaagcagtgcctcttttgggctggattgattttgtgcagcataccttatgacaccaacggcatatgtttcttatttcttaggtaccagataggagtacctgactagcttcaatgctcccataaaaactaaaaaatgatagtattataacccacaccacttccccatctcagattatattatagttttgaatgcatatgtataccatttatctagataactgtgaacaaaaatatacatttttctttgcgtagtggactaaagtattgttatgttaattatctctgcatggcaccttattgtgctgaaggtatcatgaccaatggatggttttgttgttttaggatcccataacattggggtagctatggctacagaacatggattagtggtgccaaacatcaagaatgttcaatcgctttcaatattggaggtagccactagccaacaactgttttttatatgtaaattcatgagtatttcctcacttttctgaaatttcaattctcttacatgtttgcattcaaagtcaactgtagtttcacggctgctaggaaaaatgagaaacataaaaatcctctggaaaaaattcaatcctcaatgtaatggaccatacttaactattggatactcttaggaggactgatttaaatctaaacggtagaaaagaatttttggaagatggaaacaaatattatatttagggaaagaaagagagaaaaaacactaccatgtcaatcatgtttcgtcgttttatatgctaacatttggagtaaagaaatacaaggttcaaaggagctcccttcgaagacaaatcatagccaaagaagaaactatctctgattgtcttctttgcaaccaatttcttacaccacgccatgcaactaactagtcatactgaatttctttaattttttagtagatattttataaaaaaaaattggcggttcatatttctgattgttctcattgatttttagtacaattatttggtaaaaaaaatataagaaacatttattgcttgagttaaatgcgcacaatacattgtcgggttaaatattaaacaattcccgtaattgagttgaatagtaactataattgtattttacacttaccacataattgtgcagtcagttgcctcgttacttaaatgtttggttctttctattttcttacagataacatgcatgatctagatgcaatgaagtaagtgacatctaggatattaagtaattgcttgtcttcagaaatgagcattgttaccctagaaaatgtcgacatttattgtgttcttggtcttgagataagataatactctagccagaagtgattaaaagtgtttcccatattttgaagtcgcttgacctaagaaacatgatactccctccatcccttcttatatgaggttcaacagagtaccaccttttgtttttagatgatatatatattgtgaacttatgagtggtccagttacatctagacataattgattgtcttattggctgcctggatttttattcatcttgaaaatggttacacgtaccagatcacaaaagaattgtcacgtctacatgagatggcatcgcacaacaggctgagcacagaagatattgctggtggaaccataacactaagcaacataggcgccattggtggcaagtttggctctccgcttctcaacttgcctgaagttgccattattgcactcggacgcattcaaaaacttcctcgctttgatgatgatgaaaatgtttatccttcctcaataatcaatgtatgttatcatcttaaccccttccgcctaccatgagcctgcattccaatgcttgagcttacagtgtgatatcctgttgtacataccatgcaggtgactgttggagctgatcaccgagttgttgacggcgccaccgttgcaaggttctgtaatgagtggaaaagccttgtggagaagccagaacggctattgctgcatatgcgatgatccaattggatatctgatgcaggcgagggcagaccatttgcacaggtgctctgaaagcctgaaaacacaggcaatctggcatgatcgcatggagatttcgtactgtaagcctatgaaatctttttgctggacaaagaatctgtcaagtaaatatttatatgaatgtagtgagctgacagtgcaatggcacactgtgtaaaataattctaccacactggaataaagcagggaattgttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0314100, RefSeq:Os01g0314100