Difference between revisions of "Os01g0382200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0382200| Description = The start codon is not identified.| Version = NM_001049625.1 GI:115436663 GeneID:4325423| Length = 4175 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0382200|
 
GeneName = Os01g0382200|

Revision as of 18:51, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0382200

Description

The start codon is not identified.

Version

NM_001049625.1 GI:115436663 GeneID:4325423

Length

4175 bp

Definition

Oryza sativa Japonica Group Os01g0382200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16180492..16184666

Sequence Coding Region

16180492..16180854,16183585..16184544

Expression

GEO Profiles:Os01g0382200

Genome Context

<gbrowseImage1> name=NC_008394:16180492..16184666 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16180492..16184666 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaaccaacgcccaagcttgctctgtacctctcaaacctcgatgaccaacgcctcctccacttccccatccagtacatctacgtcttcaccggcacccttgacatggatactctgaaggtggcactctctagagtccttgttgactattacccactcgctggtaggttgagggctagcaatgagcacgatggcaaactcatcattgactgcaactcagagggggttctctttgctgagggatttctgcccggcctcactgctggggacttcatcctagggcatgccaagcctcataagtcttggaagaagctgctctataaagatgagcagagctttgtgtgcacgccaccactagtcgtacaagtaactcacctcagctgcggtggcaccatcctctgcaccgccatcgcccactgcgtctccgatgccttcggtgccgcgcacttcctccgtgcctgggcgcgcgccgccatgtccgaagactccgaactcgcgcatcccgccgtcgcgccctgccacgaccgccgcgccctcgcgccgcgctgcaccccgcgcatcgcgttcgcgcacccggagtacaccgctgccagcgggggcgatgacgcctccgccgtcgcggaggcctcgtcgcgcctcttcgccccgccgctgtcgccggtttccgtgaccttcacggccgcgcacgtcgcgcggctcaagaagctgtacgcgccgtcggcgtcgcctctcgagcagtgcacgtccttcgaggcgctcgcggcgcacgtctggcgcgcgtgggtccgtgccctcgacccgccggcctcactccccatcaagctcctcttcaccatgggcatacgccggctggtcaagcccgagctgtcgggaggctgctactgcggcaacggcttcgtgctggcgtgtgccgagtcgacggccgggcagctggcggcttcggcgcccgacgcggcgaggctggtgcaggagaccaagcagcgggtcgacgacgactacgtgcggtccgtgatcgacctcctggaggtgcggcggggctgtttgccggacttggcggcgaccttcacgatctcctcgctgacgcggcaagggctggaggacatcgacttcggggcggggacgccggtccactttggcccgcttaccagcgaggtctactgcctgttcctcccggtgatcggcgacccgcgcggcgccaccgcgcttgtgtccgtcccgcaggccgccgcggacagcttcgagcgttgctgccatgatggactggatgacgtggacgtggaagacaagaatcagctgcctaacataggagatggcatggcatcctaa</cdnaseq>

Protein Sequence

<aaseq>KPTPKLALYLSNLDDQRLLHFPIQYIYVFTGTLDMDTLKVALSR VLVDYYPLAGRLRASNEHDGKLIIDCNSEGVLFAEGFLPGLTAGDFILGHAKPHKSWK KLLYKDEQSFVCTPPLVVQVTHLSCGGTILCTAIAHCVSDAFGAAHFLRAWARAAMSE DSELAHPAVAPCHDRRALAPRCTPRIAFAHPEYTAASGGDDASAVAEASSRLFAPPLS PVSVTFTAAHVARLKKLYAPSASPLEQCTSFEALAAHVWRAWVRALDPPASLPIKLLF TMGIRRLVKPELSGGCYCGNGFVLACAESTAGQLAASAPDAARLVQETKQRVDDDYVR SVIDLLEVRRGCLPDLAATFTISSLTRQGLEDIDFGAGTPVHFGPLTSEVYCLFLPVI GDPRGATALVSVPQAAADSFERCCHDGLDDVDVEDKNQLPNIGDGMAS</aaseq>

Gene Sequence

<dnaseqindica>1..363#3094..4053#aaaccaacgcccaagcttgctctgtacctctcaaacctcgatgaccaacgcctcctccacttccccatccagtacatctacgtcttcaccggcacccttgacatggatactctgaaggtggcactctctagagtccttgttgactattacccactcgctggtaggttgagggctagcaatgagcacgatggcaaactcatcattgactgcaactcagagggggttctctttgctgagggatttctgcccggcctcactgctggggacttcatcctagggcatgccaagcctcataagtcttggaagaagctgctctataaagatgagcagagctttgtgtgcacgccaccactagtcgtacaagtaagtacttttatatagttacttccattcatataattaattagagaagtctatgaccataccttatatatttatcatacgatgcagatagtctatatatggtcatatatatttgcttcgttttttgatacttacaaatattggtaggggtgcaagtgggtcacccgcgaacccacttatagatcaaaataaacgagttcgtagattagtttagcatataagtgggtttttacgggtagccgcttgcacccttaaatattggacatcgagtaacacctgccaagagggtgcatgttcgatctagtagatggttggacagagaatacgtcacaggttgatctaacgggttgtggggatgggacatgaagttggacatatatatacacaggacggaattaattagaattgttcagatgggtgaaacttgtggtgtgtatattactagaagttggggacgattcgaaccattatatgtagctgtatgtatattagccgaatgacagggatcggtcgaccggcgggggagcagaaatcgggcgctccccccgtcccctgccccccacgcgcatgcatgccacctggccccaccacagtctctacccccacctgcaacaaatcacccacatattttggaaactctctattaagtggatttggtttattttttgtttcaccaaaaatattttacctagtgtactcacaatgttttactatgtatagatctaatgttgcagtgaactgaaatattccattgcaacaaaaaacccatatattttggaaaccccctattaagggaattcgttttattttttgttccaccgaaaaatgtttcacctaatatacttataatgtttcactatgtatgtaccaaatgttgcagttaactgaaacattctttcactatttgctgaaacattgtttttatataaggtgaaacaacacccgatttaaacgagtgaaacattttcgatctacttagtgaaacaattccgatatacctggtgaaatatcgtgcaacatttaaaaataattcaataataagctattttttttcatcggaatatatccatgtgtggtcttgttttggagatttaattgcaatgaatttaatggtgcaatcggatcatgatttggataagtaatttaagagaaaaatctgtttaaaatagctttgcacgtaaatctgacgctgacgtcatgctgacatccgtgcccgattttaatctcctcccatcgggcgcccgagctggagtcacgtccggtatattaccaataaatttccattaaattatatgcataatttaaatcgaacttctatacatagtgtattgcaaggaattggatttgtacatctcgagtgcaggcaccatcatttgcttctcactgacctcaataatctagcaaattttgtggaccaaaatatattgatctagtatataaagacatactccctccgttttataattttatattaatagaaaaaatatccgtgcgttgcaaagggtgaacgttattttaatcttattattgttatatggtttaatcaaagtgaaatacactgtgggaattcgcttggatatatatgttatttttagctaatcatgagctgcaattagaaatccatcgtctcaagttagcctgtgagtttttttaagagatttcttataagactcctaaattttcaaaagcgaactaacttaaaaactgactcaaatacggatatgtactttcaaaagaaaacaaacttaaaaaactgactcatacacggatgacgtaccaaaatactggtaaaaatatctttaatttttataatagtagagataggtcattttgacttttaaatttaaacttcttcaaaattttaccaaatttatagaaaaatagtgcaattattatagcacaaaattagttttattaaatctaacattgaatatatattgaaaaatattgctatatttttctacaaatttagtgaaagcgaaaaaagcttgacttaggaaaaaagtcaaagccgcttataatatggaacagaggtattacaaaatagtcaaattcacttatgaataatgccggcgctattcattgaaaaaaaatgtgtctttggtttgatatgtgtattggattaaatttcatgttggatggctgtggagtgacatacaacattttaatctatattctgaatttgttttaatttagaattttctgaaagacggatgagttgatgtgtatttaggctgcaaatggacctatgtggttgaactttcatgtttttcgtaaagctattagcagtcacatgcatttctttcgcaacggaaaaaaaacagacatgctatatttatggcgacacaccttgatcacagtcggttaatctgaccgttgaatatcatgtagattcatgctacactattgatgcttaatttaacgaacgtttgattcgcttagtctactacaaccctacaaccctactgctcctgttattcattagtttcccattgaatttatactaacatctcttttatttatatcgacttacgtatgtaattttaagacttacattatatatacataaaattacatatgtaatttagggatttacaatgtaattatatgctgataattttttagaaaaatatgatggcataaatatagggagttccagagaaaatcattaattgtaagtcaatgtgacgtaacctggttttcgtatccacgtggcacggacatgttcaggtaactcacctcagctgcggtggcaccatcctctgcaccgccatcgcccactgcgtctccgatgccttcggtgccgcgcacttcctccgtgcctgggcgcgcgccgccatgtccgaagactccgaactcgcgcatcccgccgtcgcgccctgccacgaccgccgcgccctcgcgccgcgctgcaccccgcgcatcgcgttcgcgcacccggagtacaccgctgccagcgggggcgatgacgcctccgccgtcgcggaggcctcgtcgcgcctcttcgccccgccgctgtcgccggtttccgtgaccttcacggccgcgcacgtcgcgcggctcaagaagctgtacgcgccgtcggcgtcgcctctcgagcagtgcacgtccttcgaggcgctcgcggcgcacgtctggcgcgcgtgggtccgtgccctcgacccgccggcctcactccccatcaagctcctcttcaccatgggcatacgccggctggtcaagcccgagctgtcgggaggctgctactgcggcaacggcttcgtgctggcgtgtgccgagtcgacggccgggcagctggcggcttcggcgcccgacgcggcgaggctggtgcaggagaccaagcagcgggtcgacgacgactacgtgcggtccgtgatcgacctcctggaggtgcggcggggctgtttgccggacttggcggcgaccttcacgatctcctcgctgacgcggcaagggctggaggacatcgacttcggggcggggacgccggtccactttggcccgcttaccagcgaggtctactgcctgttcctcccggtgatcggcgacccgcgcggcgccaccgcgcttgtgtccgtcccgcaggccgccgcggacagcttcgagcgttgctgccatgatggactggatgacgtggacgtggaagacaagaatcagctgcctaacataggagatggcatggcatcctaaaatcctaggcgtttgaatgccatatctcttctagaaacaatatattcatatgtctctccatttggctccaaaataataaaataactagtatggtggtccgcgcagattacgcggctagtatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0382200, RefSeq:Os01g0382200