Difference between revisions of "Os01g0560350"

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(Created page with "{{JaponicaGene| GeneName = Os01g0560350| Description = Similar to Vesicle transport v-SNARE 13 (AtVTI13) (Vesicle transport v-SNARE protein VTI13) (Vesicle soluble NSF attac...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0560350|
 
GeneName = Os01g0560350|

Revision as of 18:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0560350

Description

Similar to Vesicle transport v-SNARE 13 (AtVTI13) (Vesicle transport v-SNARE protein VTI13) (Vesicle soluble NSF attachment protein receptor 13)

Version

NM_001185491.1 GI:297720116 GeneID:9271687

Length

1613 bp

Definition

Oryza sativa Japonica Group Os01g0560350, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22939488..22941100

Sequence Coding Region

22939488..22939619,22940217..22940339,22940787..22940927,22940993..22941100

Expression

GEO Profiles:Os01g0560350

Genome Context

<gbrowseImage1> name=NC_008394:22939488..22941100 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22939488..22941100 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaactgaacatacaattgatatgattagagatagcaagagaactatgctggagactgaagatattggagtcttcctcttgcaggacctacatcaacagcgcggacgtctgatacatgctcatgatatattgcataacgtggatgataacatcggaaagagcagaaggatcattggggccatggtgaggaggatggacaggaacaagtggatcataggtttcatcatagcactccttgtgttggcgatcctatacagttggacaaggtggtcgacctccctttcgccggactgccggaggccatctgattggcgcctcgtcctcactgccgtacatgtactggacgagaaggttcaggaggggctctctgtcgccccgcacagtaccggccacgagcaggtcggtcgagaagatgacgtggccccagtcgacgtcgcggagctcgtcgggttcctcggtggcgcacttgaagaactcaaggatgaagcagccgtccagtaa</cdnaseq>

Protein Sequence

<aaseq>MATEHTIDMIRDSKRTMLETEDIGVFLLQDLHQQRGRLIHAHDI LHNVDDNIGKSRRIIGAMVRRMDRNKWIIGFIIALLVLAILYSWTRWSTSLSPDCRRP SDWRLVLTAVHVLDEKVQEGLSVAPHSTGHEQVGREDDVAPVDVAELVGFLGGALEEL KDEAAVQ</aaseq>

Gene Sequence

<dnaseqindica>1..132#730..852#1300..1440#1506..1613#atggcaactgaacatacaattgatatgattagagatagcaagagaactatgctggagactgaagatattggagtcttcctcttgcaggacctacatcaacagcgcggacgtctgatacatgctcatgatatagtaagtaactacttaccattagttattccctggctgagctaactatttttatttttcatattccatttatttactaactcacatcaccactcggaaattttcctgcacaattttgcatattctaattaaattgtatttgttatagaactgttaatttctatttcatatatgtaactatatcttatatacaattatatacaataataaatagtaaaagtaggattgaatttgatatgtactttgtatacatctaaattatcaatcacactgttttaatttggtccaccacaatctaatatagtttagttttttttctccgcctaatgtggtaatttctaggcctccagaacctgcttataactgttcgtcgatatcgaagttgaagcacaatcaaccgacgacaaatcggcaatatgatatatagatcacagtagcattatattgttcagcagttaatcaaatatgatatagatcacagtagcattatattgttaaaataaataaacaaatcatgtttgattaatgtacatggatttaggcccatgcatgcttccttgtcttccccctctgttattcatatctttgttggtgttgcagttgcataacgtggatgataacatcggaaagagcagaaggatcattggggccatggtgaggaggatggacaggaacaagtggatcataggtttcatcatagcactccttgtgttggcgatcctagtaatcctgtatttcaaatttgtgcactgagcgagtaagacagctgtgcattgttttgcatttttcagtcttgttccttttggggtttggaagaagacaggaagaaccatctcctgtggttattgtgaaatgttttggtcatgtacaaaaagaaatgtgcgaacatttgagtatgtgatagtttcatactcctatatgaaatggaattttattcaattttatcctggagataaaacgaaatgaggagctagcagtctcgtgcatcatattacttgcattgttttcttttctggctggaaaattaaagcatgcccgatttgggttgggaataattggtatgtcacttgaagatcatggctgtcaatttttggcaggaaacatggtgaagtaagtttgcggtataatcatcgtcgcatcgccacccgattggacacgaaacactcgtagtacagttggacaaggtggtcgacctccctttcgccggactgccggaggccatctgattggcgcctcgtcctcactgccgtacatgtactggacgagaaggttcaggaggggctctctgtcgccccgcacagtaccggccacgtatggcggtgtagagagcctctcgaggacgaagaacgggacctggacacctggttctccatcaggagcaggtcggtcgagaagatgacgtggccccagtcgacgtcgcggagctcgtcgggttcctcggtggcgcacttgaagaactcaaggatgaagcagccgtccagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0560350, RefSeq:Os01g0560350