Difference between revisions of "Os01g0589000"

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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0589000|
 
GeneName = Os01g0589000|

Revision as of 18:53, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0589000

Description

Nucleic acid-binding, OB-fold domain containing protein

Version

NM_001049975.1 GI:115438027 GeneID:4324446

Length

3126 bp

Definition

Oryza sativa Japonica Group Os01g0589000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:24636873..24639998

Sequence Coding Region

24637362..24637568,24637679..24637727,24637886..24638011,24638167..24638264,24638721..24638801
,24638979..24639049,24639154..24639229,24639373..24639981

Expression

GEO Profiles:Os01g0589000

Genome Context

<gbrowseImage1> name=NC_008394:24636873..24639998 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:24636873..24639998 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgtcgatggcggtggcggcggcggcggcggcgccacgcagtctcctcttccccgtctcgccttcaccctcgcagccgcggcgtgtgccagccttggcaagggctggacggagccagaggcggcatgcggcgctggcgaggcccgctcgccgccacctcgacgacgcgatgtccgccgggttcgtccgcagcctcaacgccccgcctgacgaggacggcgcgagatccggcgggaggtacgaccccaggccgggggacttcgccgtcggggtggtggtctccggcaccgaggcccgcctcgacgtcgccgtgggcgccgaccgcctcgccacgctcctcgccaaggagctcctcccgctctaccgcgccgacctcccggccttcgctgaggcggctccgcctcggccggggagcgtgggtgccgtggcgagccccgccgcgggcgagggggaccggaagccgggggagcgcggcgggggcaggacgctggtgccgcccggcacggtggtgttcgcggaggtgctcggccgcacgctgagcggccggccgctgctgtcggcgaggcgactcttccgccgcctcgcatggcaccgcgccaggcaggttatgcagcttgacgagccaattgaggtcaaaatttacgagtggaacaccgggggcctcctcacaagaattgaggggctgagagcattccttcctaagtttgagctcatggacaggataaatacgttcacagacttgaaaaacaaagttggttgcagcatacgtgtgtgcattacaaggcttgatgaagaaactaatgacctgataattagtgaaaagaaagcatgggaaatgacatatcttaaagaaggaactcttcttcaagggatcgttcacaagatttttccgtatggtgctcaggttagaatagctgggacaaacagaagtggattgttgcatatttcaaatattagtcgagggcgtgtcttgtcagtaagtgacatcctaaagatagatgaggaggtaaaagttctggtggtcaagtcaaatgttccagataaaatcgcgcttagcatatctgacctcgaaagtacacctggtctattcctttcagaaaaagcgagagtgttctcagaagctgaggaaatggcagagaggtaccgggagcagcttccagctgactctaagaacgctaaattagatgctgaccttccaggaggaacaattccatttgatgatgaagctacattatacgcaaactggaaatggtttaaatttttggaagatggcaaactaggtgctgtaacaacagaacacaatggcagctga</cdnaseq>

Protein Sequence

<aaseq>MPPSMAVAAAAAAPRSLLFPVSPSPSQPRRVPALARAGRSQRRH AALARPARRHLDDAMSAGFVRSLNAPPDEDGARSGGRYDPRPGDFAVGVVVSGTEARL DVAVGADRLATLLAKELLPLYRADLPAFAEAAPPRPGSVGAVASPAAGEGDRKPGERG GGRTLVPPGTVVFAEVLGRTLSGRPLLSARRLFRRLAWHRARQVMQLDEPIEVKIYEW NTGGLLTRIEGLRAFLPKFELMDRINTFTDLKNKVGCSIRVCITRLDEETNDLIISEK KAWEMTYLKEGTLLQGIVHKIFPYGAQVRIAGTNRSGLLHISNISRGRVLSVSDILKI DEEVKVLVVKSNVPDKIALSISDLESTPGLFLSEKARVFSEAEEMAERYREQLPADSK NAKLDADLPGGTIPFDDEATLYANWKWFKFLEDGKLGAVTTEHNGS</aaseq>

Gene Sequence

<dnaseqindica>2431..2637#2272..2320#1988..2113#1735..1832#1198..1278#950..1020#770..845#18..626#gctcaccactggcgaagatgccgccgtcgatggcggtggcggcggcggcggcggcgccacgcagtctcctcttccccgtctcgccttcaccctcgcagccgcggcgtgtgccagccttggcaagggctggacggagccagaggcggcatgcggcgctggcgaggcccgctcgccgccacctcgacgacgcgatgtccgccgggttcgtccgcagcctcaacgccccgcctgacgaggacggcgcgagatccggcgggaggtacgaccccaggccgggggacttcgccgtcggggtggtggtctccggcaccgaggcccgcctcgacgtcgccgtgggcgccgaccgcctcgccacgctcctcgccaaggagctcctcccgctctaccgcgccgacctcccggccttcgctgaggcggctccgcctcggccggggagcgtgggtgccgtggcgagccccgccgcgggcgagggggaccggaagccgggggagcgcggcgggggcaggacgctggtgccgcccggcacggtggtgttcgcggaggtgctcggccgcacgctgagcggccggccgctgctgtcggcgaggcgactcttccgccgcctcgcatggcaccgcgccaggcaggttgagtcatcgtcactgtaccccttcttccattcgacattgctgttgctgagttcaaatctccgcagcatacatgtacacggctctgggaaattattggggattgcaaaccgatgcggtaatttgtatgttttgtcaggcaggttatgcagcttgacgagccaattgaggtcaaaatttacgagtggaacaccgggggcctcctcacaagaattgaggcaaggacgggatgcctttgttgctgacttgctctctctaatcttcaagagacgtggtgttttcgtttgagcaaactaacttttatatcgacttcatttttcaggggctgagagcattccttcctaagtttgagctcatggacaggataaatacgttcacagacttgaaaaacaaagtaaatgaacttacgacggtttactgctcgtcaatgtgcaaaatgttattaccttctaatgctttgttactatgcattactcatacatgaaatgctgcatgcctgcatggtgtattaagttaaactcacacatcttagtttgtctgggttgaagtaaccgattgcttgttctcgcaggttggttgcagcatacgtgtgtgcattacaaggcttgatgaagaaactaatgacctgataattagtgaaaagaaagcatgggtcagtgccctggcatattatctatatgttctgtttgtaactgtacagatataaatctgtattttttttgttataagtactagggtactacatattagaaattaggtacgatctaatatggtggcacaaattaaatcttgagtatagaaagtacctggtgtgcttcactactccattgcccttgaccaattgaaactctgcctggtgccattgttctgtcaccaattatcatgtccaatcaatttcgtaagatttcattttcaatgctgaaatcagttccacgtgctctgaactttcatgccccctgaaacattgattagttttcctgttatatgtattgcataaatgaatacagcaaggttgtttccttcttattgcaaatgctactagcatagtcagagatatagcaacaagatacttggatatataccaatatattcaactcttgatcatcaggaaatgacatatcttaaagaaggaactcttcttcaagggatcgttcacaagatttttccgtatggtgctcaggttagaatagctgggacaaacagaaggtatgcatggggccttcacaatgcagtttgtgtagccctttttatatttgatgcatcatttattcgatggactataataagaaaaatcatcttcttttattttgctaaaatggtacggaaagaaaataatattgtattcaattactcatatgcagtggattgttgcatatttcaaatattagtcgagggcgtgtcttgtcagtaagtgacatcctaaagatagatgaggaggtaaaagttctggtggtcaagtcaaatgttccagataaaatcgcgcttaggtaatcactgactcactttgtattggatctattctgttgtcagttaacataaaaattgttctgattgtcccagtttactgaatactctgttacattgaggtttgtttttcatcagttatggtagaatactgaattgaagtttgattttgctacaacagcatatctgacctcgaaagtacacctggtctattcctttcagaaaaagcggtaagatattgatttgaagtttgatcttgttctatactcaatatcttctataacaaattttacctcgtatttgcatttctcagtacctttttgtcttgtgctgttttcagagagtgttctcagaagctgaggaaatggcagagaggtaccgggagcagcttccagctgactctaagaacgctaaattagatgctgaccttccaggaggaacaattccatttgatgatgaagctacattatacgcaaactggaaatggtttaaatttttggaagatggcaaactaggtgctgtaacaacagaacacaatggcagctgatgcagctttcagggattacatgttgtgagaacaatctggttgctggcttgctgctgaagaaaaatagcatatataagcagcttagcatgaagcatatgaagttgaaccttcattggatgacctggagaaataatggttcttggtgagagcacagcactttccaaagcaaagaaccagcattaacggttctacgagtagcaacatgcagctccatctggcaactgcatcaacaaaagaagcagcaacaaaatttctttgtcggcgtatgccgtactcctatcagcaaagaggaacttctttgtgagcctgtcgttccttggaaaattttgatgcgctgtggaccgaaaatgacacattttgtgaatgtttaatccattagtccaagtagctccgtggagaaaacatcacatttgatagcatccactatttgtacaacttgagttcacttgtatttactatttcaatggaaacaagcaactcaactacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0589000, RefSeq:Os01g0589000