Difference between revisions of "Os10g0492900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0492900| Description = Similar to Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D- galactoside galactohydrolase)| Version =...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0492900|
 
GeneName = Os10g0492900|

Revision as of 21:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0492900

Description

Similar to Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D- galactoside galactohydrolase)

Version

NM_001071470.2 GI:297610709 GeneID:4348984

Length

2822 bp

Definition

Oryza sativa Japonica Group Os10g0492900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19164988..19167809

Sequence Coding Region

19166821..19166909,19167015..19167080,19167261..19167344,19167447..19167511,19167623..19167735

Expression

GEO Profiles:Os10g0492900

Genome Context

<gbrowseImage1> name=NC_008403:19164988..19167809 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19164988..19167809 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tccattggttctgttacaccattatcgcagggagtggactacctcaagtatgataactgcaacaatggcgacctgaagccactggagaggtacccggagatgagcaaggctctgatgatggccggccggccgatctacttctcgctgtgcgaatggggcgacatgcacccggcgaagtggggcgcggcgtacggcaacagctggagaaccaccaacgacatcgcggacacctgggagagcatggtgtcgagggcggatgagaacgaggtgtgggcggactacgcgcgacctggcggctggaacgacccggacatgctggaggttggcaatggcgggatgaccaacgacgagtacatcgtccatttcagcctctgggccatctccaaggtactaccaaatgtgacggatgtcggataa</cdnaseq>

Protein Sequence

<aaseq>SIGSVTPLSQGVDYLKYDNCNNGDLKPLERYPEMSKALMMAGRP IYFSLCEWGDMHPAKWGAAYGNSWRTTNDIADTWESMVSRADENEVWADYARPGGWND PDMLEVGNGGMTNDEYIVHFSLWAISKVLPNVTDVG</aaseq>

Gene Sequence

<dnaseqindica>1834..1922#2028..2093#2274..2357#2460..2524#2636..2748#cgagctgtgccgttcttgatcaccgaggcgatggcggcggcggcggcggtgctgcttgcggtggcgtgcgccgcggcggcgatgatcgccggcggcgagtgcgggagggtggtgcacgtgggggaggagcaccggaggagcatgctcgccaatggcctcgccacggctcctcccatggggtaaggaataataatcactcacatcgtcactaagcatgcagtaatttagcgtatctaattaatccaatgttaattctaattgttaagcgtagttagctagtaatagtaatggttaatctttgctgctatcctgtcatgtgagcaatagcgcctttctgcttgtgagtctgcatcttggttaatttaagcttctgaatttcatgcagctggaacagctggaatcacttcgcctgcgacggcaacggagaagacgtcatcagggagactggtaatttcagttattttacgtaggatgttttgattttgtcctaaatcaaatttctttttaagtttggtaaaacatatagagaaaatgtaataatatttctataacaaaaaattaattttgttaaatccttttttgcaatatatttgtttggagtaataaacttcttttttttttctgtccggcagtgccgtttacagctgtacatttgtactagtagtatcctactaccagcgtgagctgattgactgaaagtctgaaacagaataattgatgaattagcctttgttgaatcttgattaattatttttccctttttttttctgagcagctgatgcacttgtgtcaaccgggcttgcagctgctggctacaaatacgtcaacatcggtacgtgcgtcatgcatacgtcattgcttcttggactaaccctttttttcccttttcttattattctaggatattacttgtcgtcgatggctggaacttgattgagtataataaaatcatgtgttctttttttaaaaaacttttctgatgattatttttattgttattataggataatattgtcaatggcttgaattggagtataataaaatcatattgttaatagaaaaatgatatgattgttttgatattctatgatattgtcgtcaatggcttgacctgactgagtataataaaatcgtgtttttttatatatataaaaaaacttttcagatgattgctgggcagagccacaacgtgattcgaaggtgtgtgtgataatgcagcactgataatttcgatttcttctggactgtagttgtaatgaacagagttgatgtgattaaaggcagacaaaaaaaaatttcatccacagtacttaatattgatgatactgtcccagggtaatcttgtggccaacaaaaagacattcccccacgggatcaaggcgctcgccgattatgttcacagcaaggggctcaagctaggcatttactccgatgcagggtaagagccaagaacataaaaaaatcaatattttgaaaaataaactttgcaaatagattacaataggtggtttaaccaatgcagtagaaatagaagatggagcaaataatctgtggcaaaatatcaatctgtttgttgctccaatctccattttttgttttttttaactgattcttgcgtgcaaatttctgaagattcaagacgtgtgcgaaggttcagccggggtctctcggccacgaggagcaggacgccaagacattcgcatcgtgggtgagaatgagccactgaatcacactgaaatgttcagaaacatgtctattttttggggttttatctaggtgttcagtgtcttcttttttcaagaaccggtttagtgttaaagatttccttcttgatccattggttctgttacaccattatcgcagggagtggactacctcaagtatgataactgcaacaatggcgacctgaagccactggagaggtgatcactcttggtgctactacctgtctgaactttctgaagccgtcgatactgaatgtctgaaaaatgactcgtgaatttctctgacaagtagtccaatggtaggtacccggagatgagcaaggctctgatgatggccggccggccgatctacttctcgctgtgcgaatggtaggttaggacaactcgatgtgtattagtttctctgaacctctgaatctgtgatcagtttcgtgttcatcattttttttttggcgaacatgcaaaaagattacacatcagtatattagaaaaatctgtgatcagtttcgtgttcatcattcgagctgtcgtgtttgtcggattgatcaggggcgacatgcacccggcgaagtggggcgcggcgtacggcaacagctggagaaccaccaacgacatcgcggacacctgggagaggtgaaccgccgtcttcaactatttaaatgacatgcaagaaacgagaggatcagtgttcagagttcagagttttcatatgtgattgtgttcgttctgtttcagcatggtgtcgagggcggatgagaacgaggtgtgggcggactacgcgcgacctggcggctggaacggtcagtgaatcactgacgaatcatattactgtatcatcagttcaatccatgtctgaatttcaaatgctacagtttcgtctaaacttaggcatataatttgtggtttgtcagacccggacatgctggaggttggcaatggcgggatgaccaacgacgagtacatcgtccatttcagcctctgggccatctccaaggtactaccaaatgtgacggatgtcggataatgatggtattcgtttctactaaagatgacgatgaaaatagtgtaaagaaaaaaagaaagttatcatcggttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0492900, RefSeq:Os10g0492900