Difference between revisions of "Os01g0600900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0600900| Description = Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP)| Version = NM_001050028.1 GI:115...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0600900|
 
GeneName = Os01g0600900|

Revision as of 18:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0600900

Description

Chlorophyll a-b binding protein 2, chloroplast precursor (LHCII type I CAB-2) (LHCP)

Version

NM_001050028.1 GI:115438249 GeneID:4324599

Length

1179 bp

Definition

Oryza sativa Japonica Group Os01g0600900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25264209..25265387

Sequence Coding Region

25264279..25265064

Expression

GEO Profiles:Os01g0600900

Genome Context

<gbrowseImage1> name=NC_008394:25264209..25265387 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25264209..25265387 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccaccatggccctctcgtccccggcgctggccggcaaggccgccgcgaaggtgttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgttcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgggctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcctgatccacgcgcagagcatcctcgccatctgggcggtccaggtggtgctcatgggcgccgtcgaggggtaccgcatcgccggcgggccgctcggcgaggtcgtcgacccgctctaccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccaccaacttcgtccccggcaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSP WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQ VVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK</aaseq>

Gene Sequence

<dnaseqindica>71..856#acagcacgcacacacaccccaccagcagcagcagcagtagctgagcttgaagcagcagagcgaggtagacatggccgccgccaccatggccctctcgtccccggcgctggccggcaaggccgccgcgaaggtgttcggcgaggggcgcatcaccatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccgagctacctgaccggcgagttccccggcgactacgggtgggacaccgcggggctctccgccgacccggagacgttcgccaagaaccgggagctggaggtgatccactccaggtgggcgatgctcggcgcgctgggctgcgtgttcccggagctcctcgcccgcaacggcgtcaagttcggcgaggcggtgtggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccgagcctgatccacgcgcagagcatcctcgccatctgggcggtccaggtggtgctcatgggcgccgtcgaggggtaccgcatcgccggcgggccgctcggcgaggtcgtcgacccgctctaccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggagctcaaggtgaaggagatcaagaacggccgcctcgccatgttctccatgttcggcttcttcgtccaggccatcgtcaccggcaagggccccctcgagaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccaccaacttcgtccccggcaagtgagcgccgccgccgccgtgctgccatggcgacgcatcgccttcagctaagctagctaggttgacgacgatgcgcgtctctgcaggagagtgtgcgtgtgtgtacgcggtgcagtagatgtacgtacgtgtaccgtatagatgtacgtattcgtgtggaccgcgtggatggatgtacgagtattggagagagggtgagatctgtaccggtagtgtgtatttctgtgcaggttctgaacctgatcaatgaaatatggtgttgtgaattaattataaaattagcttgtttaatcctgcgtgctacttaatgatataataattcttctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0600900, RefSeq:Os01g0600900