Difference between revisions of "Os01g0610600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0610600| Description = Endonuclease/exonuclease/phosphatase domain containing protein| Version = NM_001050081.1 GI:115438463 GeneID:4327735|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0610600|
 
GeneName = Os01g0610600|

Revision as of 18:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0610600

Description

Endonuclease/exonuclease/phosphatase domain containing protein

Version

NM_001050081.1 GI:115438463 GeneID:4327735

Length

6924 bp

Definition

Oryza sativa Japonica Group Os01g0610600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25812495..25819418

Sequence Coding Region

25812792..25812845,25812959..25813043,25813136..25813221,25813864..25815076,25815176..25815264
,25815342..25815374,25815502..25815594,25816025..25816115,25816323..25816357
,25816471..25816552,25816703..25816755,25817139..25817204,25817556..25817719
,25818660..25819167,25819278..25819337

Expression

GEO Profiles:Os01g0610600

Genome Context

<gbrowseImage1> name=NC_008394:25812495..25819418 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25812495..25819418 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgccttgcctcccgcgcctctctacgccgcgccgccgccatgtccgcttactacaacgcccgaggatccgctcgcccgcgacgaggctactactccgggcgacccacgccgcctccccaccaccaccacgacgccggcgccgagctcgtcagcggcgactcccaccacagcgcggtgcgtgcctccaacgattcgctccgccgcggcggcggccgcgggcctcctccgtcgctgtacggatacgcgccgcctcagccgccgccggcgctatacggggccgtgccgtacaactacggccacccgcagcagccgggcccgccctacggggccgtgccgtacaactacgggcccccgccgccgcagccacaggatcctcagtacggatacgcgaccccgaatccgtatgtccaggggcatccgcagccgtactggcgtgggccaacaaatgcagggttccggccgccgtacgccggcttcaggcctggtgcgccgcagcaatcaccaaggctagcggagtaccgccgacggtggcgattcacgcagcatcggccaccacgccaagccgagaggtttaaggttctatcatacaatatactagctgattatctggcccaggagcaccagtttctttatgagcgcataccatctttcatcatggattggaactggcggaaggaaaagttagtgttcgagtttggtttgtggtctccagatattttatgtcttcaggaggttgacaaatttacagaccttgagcaagaaatggcaactcgaggatataatggcatatggaagatgcggactggaaatgccactgatggatgtgcgatcttttggcgaacagctaggtttcagttgcgctatcaagaggatatcgagttcaataagattgatctccgtgataatgttgcacagatttgtgttttagagtcggtgattccaggaaatgtgcaaactgagtctagccctaaccatcctcaacaagctaagcaaattattgtatgcaatactcatgttctttacaatccaaagagaggggacatcaaacttggtcaggtaaggacgcttcttgatcgagtgtatgctctatcaaagacatggaatgatgctccagtaataatttgtggagatttcaactctacacccaagagccctctgtacaattttatgctggagcaaaagttgaatctgtccggtcttgtgaagagtaatatatcagggcagcaaactagtactgcacagggactatatactggtcctaacacagctcgattctatccgccttttcacacgacgaatagtaaggagggtagcataagttacccaaatgatcataagcctcaacctgaagcaagaaatgtaacggaaaattctcgtctttctggcagagaaccaactttgactgatactgcttcagactctttcttaaacccagagagctctacaaatcctcacgagcaagaattaatgggctgtgtgaaaggtcctacaaaggaagcctatacatctgatgctgaagcacataccaacaccactaatggtgaagaaacttcagtggttaacaactccagtgaaggatatggagtaataaaaaagagctctgtagaagaaactaacgttacaaacttttcgtctgcttcaacgacagtaaatgatgagacccttcagtcagattcgagtgaaatagttgatagaagtcagcttcttccatcttatgaatcatctgaatctaaagattcttgggaagaattagctggtggtagcaataacagttcaaataccctggcaaactttcctggtcatgtgatttctggaaaagctacttgtgattttgagcgaaacaatgtccagtcagatacactgtttgatatatcaaaggtcagacccgatgaaaaggaacaagacagtgaacctttgtctactcaaaataattgcatgcgtagtgaatcaaaatcaaattgtttcagtgatcccctgaagtttgctgatacacttcatcaaatgagtaatctgaggctagaagaagaaaacaatactgagccaactcagttaacatcaccactagagcctttgcaacacacagattgtgccttttctgacacttgtgatgttcaatgtacacctgaagtgataaacaggctttcaaaatcgcattcatgttcaaatgagcttggaaattgttcttgtgcttttgaggatgatggggcatccaatgaagttttgtgctcagatgtgaatgcagatccttccatctttaaagagttttctggtgttaatgaatttttacttgaagatgaagaccagctgcaaacaacctcagatggttcaccatctgcccagcaagtgattacttctgataaaagatattacgattatgatccatacaggtggacaccagatgaaattaaagctgctactgggaatgaagattgcaccttcgtggaacataatttgaaagtccgaagtgtctacacagatgtggaggattttgaagggacaaaagatgccaacaaggagcctctagtaacaagttacaacagaaaatttatgggaacagtggactacatatgggcttccgaagatctgcagactgttcaagtgctagataccttcccaaaagaaattctgaaacaaacaattgggttccctaccaagaaatggggaagtgatcatatcgctttggtttgtgaattagcattcacaaaataa</cdnaseq>

Protein Sequence

<aaseq>MRLASRASLRRAAAMSAYYNARGSARPRRGYYSGRPTPPPHHHH DAGAELVSGDSHHSAVRASNDSLRRGGGRGPPPSLYGYAPPQPPPALYGAVPYNYGHP QQPGPPYGAVPYNYGPPPPQPQDPQYGYATPNPYVQGHPQPYWRGPTNAGFRPPYAGF RPGAPQQSPRLAEYRRRWRFTQHRPPRQAERFKVLSYNILADYLAQEHQFLYERIPSF IMDWNWRKEKLVFEFGLWSPDILCLQEVDKFTDLEQEMATRGYNGIWKMRTGNATDGC AIFWRTARFQLRYQEDIEFNKIDLRDNVAQICVLESVIPGNVQTESSPNHPQQAKQII VCNTHVLYNPKRGDIKLGQVRTLLDRVYALSKTWNDAPVIICGDFNSTPKSPLYNFML EQKLNLSGLVKSNISGQQTSTAQGLYTGPNTARFYPPFHTTNSKEGSISYPNDHKPQP EARNVTENSRLSGREPTLTDTASDSFLNPESSTNPHEQELMGCVKGPTKEAYTSDAEA HTNTTNGEETSVVNNSSEGYGVIKKSSVEETNVTNFSSASTTVNDETLQSDSSEIVDR SQLLPSYESSESKDSWEELAGGSNNSSNTLANFPGHVISGKATCDFERNNVQSDTLFD ISKVRPDEKEQDSEPLSTQNNCMRSESKSNCFSDPLKFADTLHQMSNLRLEEENNTEP TQLTSPLEPLQHTDCAFSDTCDVQCTPEVINRLSKSHSCSNELGNCSCAFEDDGASNE VLCSDVNADPSIFKEFSGVNEFLLEDEDQLQTTSDGSPSAQQVITSDKRYYDYDPYRW TPDEIKAATGNEDCTFVEHNLKVRSVYTDVEDFEGTKDANKEPLVTSYNRKFMGTVDY IWASEDLQTVQVLDTFPKEILKQTIGFPTKKWGSDHIALVCELAFTK</aaseq>

Gene Sequence

<dnaseqindica>6574..6627#6376..6460#6198..6283#4343..5555#4155..4243#4045..4077#3825..3917#3304..3394#3062..3096#2867..2948#2664..2716#2215..2280#1700..1863#252..759#82..141#acagcgactcgaccgtcgaacgcggccgcgccgccaccgccgccgccgcccgccgtcgccgtcgtgagcgccgccaaagcgatgcgccttgcctcccgcgcctctctacgccgcgccgccgccatgtccgcttactacaacgtacgcccgcccgcccatctcccctcgtggattgctcccccgaatcccccatccttcctcgcctctagagtctaaaccctccccatctcctcaatctctctctcttgcaggcccgaggatccgctcgcccgcgacgaggctactactccgggcgacccacgccgcctccccaccaccaccacgacgccggcgccgagctcgtcagcggcgactcccaccacagcgcggtgcgtgcctccaacgattcgctccgccgcggcggcggccgcgggcctcctccgtcgctgtacggatacgcgccgcctcagccgccgccggcgctatacggggccgtgccgtacaactacggccacccgcagcagccgggcccgccctacggggccgtgccgtacaactacgggcccccgccgccgcagccacaggatcctcagtacggatacgcgaccccgaatccgtatgtccaggggcatccgcagccgtactggcgtgggccaacaaatgcagggttccggccgccgtacgccggcttcaggcctggtgcgccgcagcaatcaccaaggctagcggagtaccgccgacggtggcgattcacgcagcatcggccaccacgccaagccggtaacatcttccagagtctgtgatatattctgtctcaatgcttagcactgcagtagtagtagaatcgcatagcaaaccatccagggagcacttctctgaagtaaaaaatagtgtaattgctttttactttttgtgtggaaaaacttttaggttattaatgatcggagtttcttaatatttgatggcttagcacttctctgaagtcaaaatggtgaaagcttttcaatttggtttgtgtactaaactagtaatggattatagtttcacttgattttagacaacagatgtgccatgtggtatgtgatatatgatatatgaaggaaaatgatttagtttatgcccctcaactcctccaaaagtttacgtgttcacacctcaattctcaaggtggatgaaaaccaccactgaaccttctataccagataaattacacccctaaccgatcaagcctgaaacagacttcagcgccacatccactgccatgctagcactgatgccacagcaaggcattggaaaagtgatacagtttctctttccctcctattacctttcccctctctcctcagctaaatcaatatcacagctaactatcttgttctgtgacaggataatgggcaaagagaatgggagagggaaacagaaaagggtccatgggcatcttatccatgagcaaacaccttatttcaagcttatgattgtaatctattcagttttacagttgaggggtgaaaactaaactttcagaagtattgaagatgtaaaagtagacactttccgtatatgaataattcagtcagataattacccatggacatggtgtgttttagaccaagagtattaaagtcgagtaatcattatgtgtgtggaattgatgttcttgttttaaaattaccacgtgttttcctttggtatattgagtagatctttttttatcatgcagagaggtttaaggttctatcatacaatatactagctgattatctggcccaggagcaccagtttctttatgagcgcataccatctttcatcatggattggaactggcggaaggaaaagttagtgttcgagtttggtttgtggtctccagatattttatgtcttcaggtaatttataactgctgtactgcagtaattcagaagggttgtgctgctaagtcaatagttaaaaaagtggtaataccttcgtggagctagttatgttatctcgaaaagttgaaatttggaaaattgcaaggaattgcaaggccactagtctacatggtcactccctgctagttcaatagctgcatataacattgtcaactagaaatcatacaaaggataaagtttgttagttttttgacacttcttgatgaatataacctgtatgctataaacacatttctttgatattaatgattaaatgggatctatattgacacacgttagacttatattccttggttatgcctgtaggaggttgacaaatttacagaccttgagcaagaaatggcaactcgaggatataatggcatatggaaggtaatatccaatagttttaaaccgatgttcgaaagcattttgaagtatgaatttatatctatcgttataatttatacacactaaatttactggtcatttgactaattcttggtcaaaatctacaatttgtttttttaaatgaaaatattccctataaaaatcgacagagtgggtatatatcacaggaattactctgttgatgaagtggacaaaatatagttgtgcaaaaatggccagtgcttctaactactcatttacagttacttgattacatagcatgcgcagaactgaaactttcattagtgattgccattgaggaaacacaattttcttgaatctgcttgaccgtatgatttacgcattatgctggacctttggtacagatgcggactggaaatgccactgatggatgtgcgatcttttggcgaacagctaggtgtgtcaatcctgtctttcccttcttcttcttttttttaaagaaagaaaccttttgtatgatacaaaattatttctcctgatgttatacctacattaaaaaacttctactttgacttctcatagtcatccaaaatttttcatcttgtaggtttcagttgcgctatcaagaggatatcgagttcaataagattgatctccgtgataatgttgcacagatttgtgttttagaggtgggcttgaaatcgttgggcaaactactgatcactttgaattgaagctttctttatgctgccaatcttgcatggcctatatctgctaatcgtttcctcattatatttttcagtcggtgattccaggaaatgtgcaaactgagtctaggtaattgaaacttcaagatttctaaactatgcatcacagttgtgagttgtgacaatggtgttatgctgtctcctttttattagttgtttctggcttgtgtagttcctattccacgttcctttattattgaagagaaaatttcataacccacatgtccacattggtattatctatccatgtttttataaccattctttcgtttcacagccctaaccatcctcaacaagctaagcaaattattgtatgcaatactcatgttctttacaatccaaagagaggggacatcaaacttggtcaggtattatgttgtggtcactcgtgagtcttaatttcctacattagttcagacttttatagtatgatttttttttcaccagaattagcctcttggcctaagcacttttgtttttagtataacatggtaaagaaataacaccttgttagaccttaagtactgagcaacaatgtacaccttatcttccatcgtgttgctttctgatgctttcatggcatcatttgagatcgtgcattgttttccaccctctcgttgtagatgactaggtgggttgtggtcttttgctattatcttgttttatactttcatcactgaaacaaagtatagctgcattacctagtatttctatcatctttcttgaccatcaatagtcagtacattatgcaccttcatacgtattatttgaatactaattttcttgtcatacttacaggtaaggacgcttcttgatcgagtgtatgctctatcaaagacatggaatgatgctccagtaataatttgtggagatttcaactctacacccaaggcaatattcagtaccttaccattttatattaaagattcatatctggttcactgtatttcttggacattttattacatgcttacatgtaacaaggtcaaaatgtctgacccatttcttcctcattcagagccctctgtacaattttatgctggagcaaaaggtaaagagtgttctgtattaacttgaaaatggctgtttttgagaaactgaaactcacacaacataataatcatgcagttgaatctgtccggtcttgtgaagagtaatatatcagggcagcaaactagtactgcacagggactatatactggtcctaacacagctcggtgaaccttctgctttatcagagacaccctcttttgacaattttttctgcatattttaacctaactgacctttgtttgatgctttttggtatttaacagattctatccgccttttcacacgacgaatagtaaggagggtagcataagttacccaaatgatcataagcctcaacctgaagcaagaaatgtaacggaaaattctcgtctttctggcagagaaccaactttgactgatactgcttcagactctttcttaaacccagagagctctacaaatcctcacgagcaagaattaatgggctgtgtgaaaggtcctacaaaggaagcctatacatctgatgctgaagcacataccaacaccactaatggtgaagaaacttcagtggttaacaactccagtgaaggatatggagtaataaaaaagagctctgtagaagaaactaacgttacaaacttttcgtctgcttcaacgacagtaaatgatgagacccttcagtcagattcgagtgaaatagttgatagaagtcagcttcttccatcttatgaatcatctgaatctaaagattcttgggaagaattagctggtggtagcaataacagttcaaataccctggcaaactttcctggtcatgtgatttctggaaaagctacttgtgattttgagcgaaacaatgtccagtcagatacactgtttgatatatcaaaggtcagacccgatgaaaaggaacaagacagtgaacctttgtctactcaaaataattgcatgcgtagtgaatcaaaatcaaattgtttcagtgatcccctgaagtttgctgatacacttcatcaaatgagtaatctgaggctagaagaagaaaacaatactgagccaactcagttaacatcaccactagagcctttgcaacacacagattgtgccttttctgacacttgtgatgttcaatgtacacctgaagtgataaacaggctttcaaaatcgcattcatgttcaaatgagcttggaaattgttcttgtgcttttgaggatgatggggcatccaatgaagttttgtgctcagatgtgaatgcagatccttccatctttaaagagttttctggtgttaatgaatttttacttgaagatgaagaccagctgcaaacaacctcagatggttcaccatctgcccagcaagtgattacttctgataaaagatattacgattatgatccatacaggtggacaccagatgaaattaaagctgctactgggaatgaagattgcaccttcgtggaacataatttgaaagtccgaagtgtctacacagatgtggaggtaaccgctaacttcacatggctagctacaatttctccatcaatctttgatgtgagaaatcaacatgtttcaccactcatctttatttagatatatcagatatcaactgttagctcgttctgagatgcctaatttttggcgggttgcaatatgtgtagttcttaactctataaacaaaataaattgcacttcacaccatttttttctttgttccaccttgcagtagtttcatttaagcaatgttttcactttgcaccaccctaagctaacgaaggttgtagtttttcagtagccgagttcatttccagttaactgtataaccactaacacaacacaatactgggctgtagcagtctagcctggtgttggaaatcaccaaaggtgcttgattcataacgacgacagacaattggataagaccaacatgagatttggctggtgcaaactgcaatactgttggtgactttgggcagcgcaaagtgaaaatattgtttgaaacaccagtgcagagtgaaataaaggacaaatagctagtgcaaaagtgcaaatttactctttttatatagaataattttctagaaccaataaattccaggcaatcatgtgaaacaattgtgattgtggtaactattgttcaaccaggattttgaagggacaaaagatgccaacaaggagcctctagtaacaagttacaacagaaaatttatgggaacagtggactacatatggtaaataagcattattggaattcctttgctattgccactgacattcaactatctaattacctctatacaatcttgtactttgtgtaatgaagggcttccgaagatctgcagactgttcaagtgctagataccttcccaaaagaaattctgaaacaaacaattgggttccctaccaaggtatcaccaagtgcatcgtatattttatcattgaacccttcacaaatttcatcgaataattgttatatcttcatgacagaactctaatccatgctgtttttgttgcttgacagaaatggggaagtgatcatatcgctttggtttgtgaattagcattcacaaaataatgctcgtcatacaggcaaagaggggttttgccttcggagccagcgataggtgcctgcctacataaacagcaactaccctagcacaaaccccagggaaaaagaatcttggggcctatatcaacgaccatttctacattaacaatatagagcagtacattgtttcttctaatccaatagaagaacgcatcatatctttattttatcggcatgctttccaatttgtacatgaggcgacaactaaatatgtttttaattctatttgattaaatgctccaatcggagaccctaacttacctt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0610600, RefSeq:Os01g0610600