Difference between revisions of "Os01g0615500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0615500| Description = ABC transporter related domain containing protein| Version = NM_001050109.1 GI:115438579 GeneID:4326649| Length = 17...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0615500|
 
GeneName = Os01g0615500|

Revision as of 18:54, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0615500

Description

ABC transporter related domain containing protein

Version

NM_001050109.1 GI:115438579 GeneID:4326649

Length

1794 bp

Definition

Oryza sativa Japonica Group Os01g0615500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26065315..26067108

Sequence Coding Region

26065315..26067108

Expression

GEO Profiles:Os01g0615500

Genome Context

<gbrowseImage1> name=NC_008394:26065315..26067108 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26065315..26067108 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctggggaaggttggtgtcgccgtcgtcggcggcgggaggaggaggtcgaggtaccgcctcgagacgagggggttgtcgtacgtgctcccggcgaggggggcggcggcgaggttgtttcttggaggcggtggggaggagaggttgctcctgaggggcgtgacgtgcgaggcgccgcccggggaggtggtggcgatcgtcgggccgagcggggccgggaagacgacgctgctgtccgtgctggccgggtcggccgacccggcgagggtggtcgccggcgaggtgctggtgaacgggcgcgccatggacgctgcgaggttccggcgggtgtccgggcacgtcccgcaggacgacgcgctgttcccgatgctcaccgtggaggagtcgctggtgtacagcgcgcggctgaggctgcgcggggcgggcggcgggaatggcggggcggcggtggcgagggcgagggagctgatggcggagctcgggctgcggcacgtggccgggtcgagggtggggagggtgtccggcggcgagcggcggcgggtgtcgatcggcgtcgacctcgtgcacgacccggccgtgctgctgctcgacgagcccacctcgggcctcgactccggctccgcgctccacattgtcaagatgctcagggacatggccgccgcgcacggcaagaccgtcgtgctcaccatccaccagcccgggttccgcatcctcgagctgctcgaccgcgtcgtcctcctcgccgacggcgccgtccgccaccacggctccctcggcttcctcgaggctcgcctcgccgcctccggccacggcatccctccccacgtcaacgtcctcgagtacgccatggagtgcatcgactccctcaagcccgaggtcaccacggcggacgcgagccacgcggacgccgcgtcggggtcgtcacggcggcgcgcgagctccgcgccgtacgcgaactcggcggcggcggaggtgtgcatcctgtcggcgcggttcgcgaagacggtgctgcggacgccgcagctgttcgcggcgcggatggcgcagtcgctcctcgccggcgcgttcctcggcaccgtcttcctgggcgccggcgacctccagtcgaggctgggcttcttcgccttcaccctcacctacgtcctctcctccaccaccgagggcctcccggtgttcctccaggagcggcgcatcctggagcgcgagacgtcccgcggcgcgcaccgcgtcgcctcctacgtcgcctccaacgccgccgtgttcctcccgctcctcctcgcgtcggcgctgctgtacgccgcgccggtgtactggctcgccggcctcgccagggagcccggccggttcgcctacttctccctcgtcgtctggctcgtcatgctcaccgccaactcgttcgtcgcgtgcttcagcgcgctggcgcccagctacatcgtcgccaactccctcatcgcgggcctcatcggctgcttcttcctcttctccggctacttcgtggcgagcaagaacatccccaggtactgggtgttcatgcactacgccagcctgttcaagtacccgttcgaggcgttcctcgtcaacgagtacggcggcgcgcgcggcggcgccgagtgcctcgccgaggtcggcggggggctctgcgtgctcgacggcgccacgctgctgcggcagcaggggatgcgggcgagcatgcggtggagcaacgtcgccgtcatgctcggcttcgtcgtcggctacaggctgctctgcttcgtcttcctctggttcagatgccaccgcatgaggaggtga</cdnaseq>

Protein Sequence

<aaseq>MSLGKVGVAVVGGGRRRSRYRLETRGLSYVLPARGAAARLFLGG GGEERLLLRGVTCEAPPGEVVAIVGPSGAGKTTLLSVLAGSADPARVVAGEVLVNGRA MDAARFRRVSGHVPQDDALFPMLTVEESLVYSARLRLRGAGGGNGGAAVARARELMAE LGLRHVAGSRVGRVSGGERRRVSIGVDLVHDPAVLLLDEPTSGLDSGSALHIVKMLRD MAAAHGKTVVLTIHQPGFRILELLDRVVLLADGAVRHHGSLGFLEARLAASGHGIPPH VNVLEYAMECIDSLKPEVTTADASHADAASGSSRRRASSAPYANSAAAEVCILSARFA KTVLRTPQLFAARMAQSLLAGAFLGTVFLGAGDLQSRLGFFAFTLTYVLSSTTEGLPV FLQERRILERETSRGAHRVASYVASNAAVFLPLLLASALLYAAPVYWLAGLAREPGRF AYFSLVVWLVMLTANSFVACFSALAPSYIVANSLIAGLIGCFFLFSGYFVASKNIPRY WVFMHYASLFKYPFEAFLVNEYGGARGGAECLAEVGGGLCVLDGATLLRQQGMRASMR WSNVAVMLGFVVGYRLLCFVFLWFRCHRMRR</aaseq>

Gene Sequence

<dnaseqindica>1..1794#atgtcgctggggaaggttggtgtcgccgtcgtcggcggcgggaggaggaggtcgaggtaccgcctcgagacgagggggttgtcgtacgtgctcccggcgaggggggcggcggcgaggttgtttcttggaggcggtggggaggagaggttgctcctgaggggcgtgacgtgcgaggcgccgcccggggaggtggtggcgatcgtcgggccgagcggggccgggaagacgacgctgctgtccgtgctggccgggtcggccgacccggcgagggtggtcgccggcgaggtgctggtgaacgggcgcgccatggacgctgcgaggttccggcgggtgtccgggcacgtcccgcaggacgacgcgctgttcccgatgctcaccgtggaggagtcgctggtgtacagcgcgcggctgaggctgcgcggggcgggcggcgggaatggcggggcggcggtggcgagggcgagggagctgatggcggagctcgggctgcggcacgtggccgggtcgagggtggggagggtgtccggcggcgagcggcggcgggtgtcgatcggcgtcgacctcgtgcacgacccggccgtgctgctgctcgacgagcccacctcgggcctcgactccggctccgcgctccacattgtcaagatgctcagggacatggccgccgcgcacggcaagaccgtcgtgctcaccatccaccagcccgggttccgcatcctcgagctgctcgaccgcgtcgtcctcctcgccgacggcgccgtccgccaccacggctccctcggcttcctcgaggctcgcctcgccgcctccggccacggcatccctccccacgtcaacgtcctcgagtacgccatggagtgcatcgactccctcaagcccgaggtcaccacggcggacgcgagccacgcggacgccgcgtcggggtcgtcacggcggcgcgcgagctccgcgccgtacgcgaactcggcggcggcggaggtgtgcatcctgtcggcgcggttcgcgaagacggtgctgcggacgccgcagctgttcgcggcgcggatggcgcagtcgctcctcgccggcgcgttcctcggcaccgtcttcctgggcgccggcgacctccagtcgaggctgggcttcttcgccttcaccctcacctacgtcctctcctccaccaccgagggcctcccggtgttcctccaggagcggcgcatcctggagcgcgagacgtcccgcggcgcgcaccgcgtcgcctcctacgtcgcctccaacgccgccgtgttcctcccgctcctcctcgcgtcggcgctgctgtacgccgcgccggtgtactggctcgccggcctcgccagggagcccggccggttcgcctacttctccctcgtcgtctggctcgtcatgctcaccgccaactcgttcgtcgcgtgcttcagcgcgctggcgcccagctacatcgtcgccaactccctcatcgcgggcctcatcggctgcttcttcctcttctccggctacttcgtggcgagcaagaacatccccaggtactgggtgttcatgcactacgccagcctgttcaagtacccgttcgaggcgttcctcgtcaacgagtacggcggcgcgcgcggcggcgccgagtgcctcgccgaggtcggcggggggctctgcgtgctcgacggcgccacgctgctgcggcagcaggggatgcgggcgagcatgcggtggagcaacgtcgccgtcatgctcggcttcgtcgtcggctacaggctgctctgcttcgtcttcctctggttcagatgccaccgcatgaggaggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0615500, RefSeq:Os01g0615500