Difference between revisions of "Os01g0642000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0642000| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001050223.1 GI:115438816 GeneID:4326560| Length...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0642000|
 
GeneName = Os01g0642000|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0642000

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001050223.1 GI:115438816 GeneID:4326560

Length

4916 bp

Definition

Oryza sativa Japonica Group Os01g0642000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27548545..27553460

Sequence Coding Region

27548668..27548894,27550138..27550214,27550694..27550763,27550844..27550924,27551004..27551078
,27551186..27551287,27551727..27551864,27552757..27552822,27552903..27553083

Expression

GEO Profiles:Os01g0642000

Genome Context

<gbrowseImage1> name=NC_008394:27548545..27553460 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27548545..27553460 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggcccgtctccagcgccgaggaggtcggcgcgctcctctcgcggagcgactcctccggccgccgccgccgctcgtcgccggtgcagtccgcgtccccgcgacccgccggatgcggctgcggcggcccgaggcggcagtcctcgttccgcgacgatgtcgggcacgcggcctccgagacgtacctcgtcacgcgcctcaccttcagcctcctgcagtacctcgggttaggttaccggtggatgtcacaactacttgccctgacaatctatgcaattttacttatgccaggttttttgcaagttggatattactatttcttctcaagtcaggttcgtagaagtatagtctatggagaacaaccaagaaacaggctagatttgtacatacccaaagatatcaacagaccctgcccagtggtggccttcgtaactggtggggcttggattattggttacaaggcatggggttcccttcttgggaggcggttggctgagagaggaatcatagttgcttgcattgattacagaaatttccctcaaggaacaataggtgacatggttagcgatgcttcccagggtatttcttatgtgtgcaacaacattgctagttatggaggtgatcctaatcggatctacttggtgggtcagtcagcaggagcacatattgctgcatgtgccctcatcgagcaggcagtgaaagaatctagtgggcagtccatttcttggagtgttacacaaatcaaagcatattttggtttatctggaggatacaacatgcatagtttggttgaccattttcatgaacgtggtcttaatcgttcaatatttttcagcataatggaaggagaggagtcattgtcacgttattctccggaaattgttgtcaagcagtcaagttcccagacaatagctcttctgcctcccattgttcttatgcatggaactgaagattattcaataccatcatctgccaggtttcttcttatgccttctgcagatgtccatttaagatga</cdnaseq>

Protein Sequence

<aaseq>MRPVSSAEEVGALLSRSDSSGRRRRSSPVQSASPRPAGCGCGGP RRQSSFRDDVGHAASETYLVTRLTFSLLQYLGLGYRWMSQLLALTIYAILLMPGFLQV GYYYFFSSQVRRSIVYGEQPRNRLDLYIPKDINRPCPVVAFVTGGAWIIGYKAWGSLL GRRLAERGIIVACIDYRNFPQGTIGDMVSDASQGISYVCNNIASYGGDPNRIYLVGQS AGAHIAACALIEQAVKESSGQSISWSVTQIKAYFGLSGGYNMHSLVDHFHERGLNRSI FFSIMEGEESLSRYSPEIVVKQSSSQTIALLPPIVLMHGTEDYSIPSSARFLLMPSAD VHLR</aaseq>

Gene Sequence

<dnaseqindica>124..350#1594..1670#2150..2219#2300..2380#2460..2534#2642..2743#3183..3320#4213..4278#4359..4539#ctccccctccgacggcgtccaccacccgaccacctcccgcaccgttgcgagttgcgacccacccacccacccgaaccgattcgaatatcccgcacaccgccccagcgccgcgcgccgcccgcaatgcggcccgtctccagcgccgaggaggtcggcgcgctcctctcgcggagcgactcctccggccgccgccgccgctcgtcgccggtgcagtccgcgtccccgcgacccgccggatgcggctgcggcggcccgaggcggcagtcctcgttccgcgacgatgtcgggcacgcggcctccgagacgtacctcgtcacgcgcctcaccttcagcctcctgcagtacctcgggtaattattcgctgtttagtttgtttttttcccctctacccttgttagcccttgcgttgcgtttgcccgaatcgatcatggactagctcacgagccaatcgcggacgcctcgatgcgatacgtgagctggcgatttgtttccatgctatttccgatggcgaagcttctgttttcttggagttccttccgtgtggtggattcgaacgcagctttcatggagaagctaacgataagtcgataatccactagggaagtagggagtgttttgactaggttgctgatgcaattgcgtgtggaacttcgaggacaggtgagagttgagacgtactgggaattaagctacggggtccacacgagtgttttaacgtttagaggtttccctggcgtgcagacttttgttgttgctaacacgcattttgtccgttttataaattaaattagtgtattggactattggtttacatgcagattcagtcattctgtattactcgtgtactgtaccgctgtcagttagtcacatggcccactatgtcttcgtgcaaattgtgctcttgctttggacttactgatcaattaactgaccagtatgtatataaagtagtagcaccatggaacagtgtggcagcatgatgcacggctgcttctattttacctggcttattagtcatgaattttgttgatgtgattctttcttgttgcctcagaaattctgttctacatcttgtttagaattgaacagctgctgcagttaagattgtttacaagacatgtatacagctatagatgttctcataagcacaaccaaagcataaatatgcttttaagatacttgtaagacagctaagttcacaagtatataatgtttgagaagctttaatattggaatctttgagcgctatattcaggtctgggccttgcattttcaagtgccagtatttatttccaactctgcattcaatgtagcaaaagtttctatccagctagcgtaacattacattaggccgtgtttagttccaaaataattcttcaaacttccaacttttccatcacatcaaaactttcctacacacacaaacttctaacttttccgtcacatcgttccaatttcaaccaaacttccaattttggtgtgaactaaacacagccttagtgacaattttcatcctttcgccaaaaaatatctcgatgaatataattgtgttggtttttttacatattccttactatcttaattgttttgcaggttaggttaccggtggatgtcacaactacttgccctgacaatctatgcaattttacttatgccaggttttttgcaaggtatgctgcagataacatgcagttctattgactcaattgttcaagtcagttgtgttgcgcatgaagagtatgatgccttagggttttatgcaaaaaaaaagaagaaaattacggtggtgatgcctgcaggatggggggggggggggaagacggatggacatagttccaaatattcagaactttgtttgaacttccgaacaaaatttttgcttggtttgagcgtggttcggggcaatattgtctagcataaggggaaggaagagttcagatgagaggaacaggaaagggtaaaagggacttttgacctattttgaccaatttttactggagacacttcctaccaggaccaactggcaaataattttttttcagaatttcaaacctgaccctaacacagtttcagaaaagaatatggcatgtctgatttctcttcctaattaccctacaacgttctaaaacagtcctttcttggttcacagttggatattactatttcttctcaagtcaggttcgtagaagtatagtctatggagaacaaccaagaaacaggtaacatcatcatcaataaaataaaataagaacactgtttcctgtatgttattgaaactgataaatattacattgaacaggctagatttgtacatacccaaagatatcaacagaccctgcccagtggtggccttcgtaactggtggggcttggattattgggtaagtgttaagtttgcaacaaggcgccacggtattcattggcttttctttgttgatgaccttgcacaaaatattttagttacaaggcatggggttcccttcttgggaggcggttggctgagagaggaatcatagttgcttgcattgattacaggtgctgatgactccactgaatcaatactatatcattttattactaatgaggaattgtactgttggcaatatttatttgtttaatacaacgttgtacatttatatcagaaatttccctcaaggaacaataggtgacatggttagcgatgcttcccagggtatttcttatgtgtgcaacaacattgctagttatggaggtgatcctaatcggtaagataacaactatttcagtttctattaaggttattatgaaaggttcttacagaactgttattaaaattttgaagtcaagtttgcatgtgaattttttggcatttacatagcaatgtctgttgatagcctccttgaaattcctagaattattattagaaaaagaaagttgatttatggcattggttgcttacccttaaactcttcatgctaggtaaagtagcaaatatcacatgttcatgtagatattttctttcttcatatttgtgtagatattgtcaagccatatattgatataattctgtttattatctgtccttgctccttcaattcattagtccttcataagtaacttcctccagaataaccttttgctatataaaaacagcaaattctagctccttcatgacatacttatggatttatgttaaacctgtaggatctacttggtgggtcagtcagcaggagcacatattgctgcatgtgccctcatcgagcaggcagtgaaagaatctagtgggcagtccatttcttggagtgttacacaaatcaaagcatattttggtttatctggagggtgagcttgcagttcgtttttattagctttttttttgcgtgaatattcctattactgcaacactggtatatgcattgagttggcagcaagcaacaaaaagtctgccaacttcttatttaatttttgctatccttaaaattcacacttggatgtcagatattctgtttttcgggcatattggccgttttctctggaagatattgtcctcggcatatttgatcaaacactggaagcatgttattttcttccaatcttcaaacaagtaattgcatttatttgttttggcacgtgaatcaatgggagtgcatccaaatgggaactaatcttaaataagaaataaattaatagtcttcatcatttcacatcatctgggttagttgtatttgttactaacatgtaaatagaaaccctatgaattctcccccaagttattctttgttccattctcttcatttgctggtgcttccatgtgtgccaatatgaaagtggttcgaccaaactgcttaactcagtttcaatttgacattcaggatttgtaaataaaactatcaatgattcattgtgcatatttatgatttattatatcaacctccttttaccctgattttagttgaccatcaattcaatgtgattacatataaatctctaatggagtaaattgtttctcctagtcaaacaaataaatcatttctcaatgtgctgtggagtttgatagacacttcaaaagttatctcctgaagatgaattatgatgattgttatcaccatattacgaataagcaccagcctccaatattcaattgttttcttttctctttcggattattctgatagaatactaagcatacattggaatttggaagcactaacaacattttttttttggggagcagatacaacatgcatagtttggttgaccattttcatgaacgtggtcttaatcgttcaatatttttcaggtagtaatatgtctatgcttggaaagtggtttgttttgtttaaacagcagttaaggaaaatttttgaataactgtttcagcataatggaaggagaggagtcattgtcacgttattctccggaaattgttgtcaagcagtcaagttcccagacaatagctcttctgcctcccattgttcttatgcatggaactgaagattattcaataccatcatctgccaggtttcttcttatgccttctgcagatgtccatttaagatgacacaagacaaactcgagcaaatgcacgcttcacctatacctatctaccctccattttttttatggcatgacatgcaggtgttactaaaggaaattttatttactaagtccagtttcacttgaatttaggaagcaatgccaatctaagttgaaaaaaagctggattgatgaaggcgtaaaccaagatgtagcatgcctaacatctctaatgccccaattcttcccttatactctccatccttttccagtgttgtctattagaagcttaaatgtagcatatcatgaatatgaagtctttttacatcttggctattacaagcctaaatgtggatatacagagcagagaattgaagaaaagcatttgcagtttttctagat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0642000, RefSeq:Os01g0642000