Difference between revisions of "Os10g0497700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0497700| Description = Similar to Phytochelatin synthetase| Version = NM_001071496.1 GI:115482735 GeneID:4349011| Length = 3054 bp| Defini...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0497700|
 
GeneName = Os10g0497700|

Revision as of 21:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0497700

Description

Similar to Phytochelatin synthetase

Version

NM_001071496.1 GI:115482735 GeneID:4349011

Length

3054 bp

Definition

Oryza sativa Japonica Group Os10g0497700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19433210..19436263

Sequence Coding Region

19433277..19433352,19433544..19433623,19434211..19434673,19435096..19435255,19435359..19435633
,19435816..19436039

Expression

GEO Profiles:Os10g0497700

Genome Context

<gbrowseImage1> name=NC_008403:19433210..19436263 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19433210..19436263 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgattggtgttggtggctgctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccacatatgcttatgattccctggatccaaacggcaacatcacgataaaatgggatgtgatgcaatggactcctgatggctatgctgccgttgtcacactgtccaactaccagcaattccggcacatccagccaccggggtggcagctggggtggacatggcagcagaaggaggtgatctggtccatgtacggcgcgcaggccatcgagcagggcgactgctccatgtccaaggagggcagcaatgtcccccacagctgcaagaagcatcccaccgtcgtcgacctcctcccgggcgccccaatcgacctgcagatcgccaactgctgcaaggctggatcactgagcgcattcagccaggacccggcaaattctgccgcgtcgtttcagatcattgtaggccattctgggaacagcaatgagactgttagggtgccgaagaacttcagtcttatggcgcctggtccggggtatacctgtagccgtgctatgattgtgaagcctagtaggtttttaagtccggatgggaggagggcgactcaagttctgatgacatggaatgtgatctgcacatactcccaatttcttgcacaaaaggttccatcctgctgtgtttctctctcgtcgttcgacaatgacaaaactgttgactgcccaacatgctcttgtggctgccgaaatgaaaaatctactacaggaaaatgtgtaaagaagaatgcacctgatttgcaatccatcattcacggccctggcagatggacctggcagcctcttctccagtgcacttcacacatgtgcccagtgaaaattaactggcacttgatgctcaaagacaaggaacactacagagtgaaaatcactgtcactaacttgaactaccgcatgaatttcaccgaatggaacctggttgttcagtatcatcccatcctcgatatcacccagatatctggcttcaattacaagtcaatccaagtcggcaaaataaatgatactacgatgctatggggagtaaagccctactatgatttgctcatgcaagctggtccgcttggaaatgtgcaaggagaactgattgtgagaaaggatttcagggcttcttccactactaacaataacaagggaagggccttcccagtccgtgtgtacttcaacggtgataactgtgtgatgccgcctccggatgcatatccagttagtattacggcttag</cdnaseq>

Protein Sequence

<aaseq>MAIGVGGCCAVLLAAALLFSSPATTYAYDSLDPNGNITIKWDVM QWTPDGYAAVVTLSNYQQFRHIQPPGWQLGWTWQQKEVIWSMYGAQAIEQGDCSMSKE GSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSG NSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQF LAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRW TWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILD ITQISGFNYKSIQVGKINDTTMLWGVKPYYDLLMQAGPLGNVQGELIVRKDFRASSTT NNNKGRAFPVRVYFNGDNCVMPPPDAYPVSITA</aaseq>

Gene Sequence

<dnaseqindica>68..143#335..414#1002..1464#1887..2046#2150..2424#2607..2830#acacaccgagtcatcgctcgccggagttagagttcgtagcggcgaaggatatagccatatattatagatggcgattggtgttggtggctgctgcgccgtgctgctcgcggcggcgctgctcttctcctctccggccaccacatgtaagcacgcccatcttcttcttcttctttttttctttctttgtttttttttggaaatgagccgcagctgacaaaaagatcactcacacatggatacactgtcgtgacactaaccaatgcctaagccattttgttttcttgttttggatttttctttttatgtgtatcacttttgcttgttgctcttgcagatgcttatgattccctggatccaaacggcaacatcacgataaaatgggatgtgatgcaatggactcctgatggctatgctgtaagtagcggtggcagtacaccaacatctctacctttattttcgtctcaacctgtacatttacactatcttgttctactacctctaataaaaaaatatatttgatgttttaaaatctattaagttctagagattaggaaagctacacatggttttatgttttgatactattaagtagtatattttataagttatattgaaggctggggtttcaaaagtttgactacactagatcttattcaaagcgtctaatgattactgaacggaggaagtatgaacttatagacttgaagttaaacagcatagccacatctcttcatgtatacttcatccgtttcatcttataagattttctagcattatccacattcatatatatgttaatgaatctagacatatatgtacgtctagatttattaatatctatatgaattgggcaatgctataaaatcttataacctgaaaaacggagggagtatgtcgcaaacaacaacaacaataacaacgagcaaaatctatatcgaatccggtttccctcttgtaactgtatcaaagatctgtcctctgaaacgtcccctgttcatcaggccgttgtcacactgtccaactaccagcaattccggcacatccagccaccggggtggcagctggggtggacatggcagcagaaggaggtgatctggtccatgtacggcgcgcaggccatcgagcagggcgactgctccatgtccaaggagggcagcaatgtcccccacagctgcaagaagcatcccaccgtcgtcgacctcctcccgggcgccccaatcgacctgcagatcgccaactgctgcaaggctggatcactgagcgcattcagccaggacccggcaaattctgccgcgtcgtttcagatcattgtaggccattctgggaacagcaatgagactgttagggtgccgaagaacttcagtcttatggcgcctggtccggggtatacctgtagccgtgctatgattgtgaagcctagtaggtttttaagtccggatgggaggagggcgactcaagttctgagtaagtagtccatctgttgttctttttctgaattgctgcttgatgcccaattgcttgtatgtcatgtggaaatgcattaggaacatagactcagttgtgatttcttaatgctaagttggattaggcataggtttagtgaggaagggacaggagttggtcacctaagactggttgatctgatattagttgaaaacaagttacagcatgctaggctttacaaggctgagcctacttaacaaatgttgtcatcttttttttaatcaattttgttatctagcaactaatacatgtcaaattcagacagacatccccatgattacatataggacttgttgtttgttttgagttctatagtagaaaaaattcctatattcagtactactagtagtacttcttaacaaaaaggaaatctctattcacagtgacatggaatgtgatctgcacatactcccaatttcttgcacaaaaggttccatcctgctgtgtttctctctcgtcgttcgacaatgacaaaactgttgactgcccaacatgctcttgtggctgccgaaatgaaaaatctactacaggaaaatgtgtaaagtgagttaatataactgttactgatcttaactacaatttccactgggatcctagcttcttgttttcaccaaaaaattgtaacaatttcctttgcatttgacaggaagaatgcacctgatttgcaatccatcattcacggccctggcagatggacctggcagcctcttctccagtgcacttcacacatgtgcccagtgaaaattaactggcacttgatgctcaaagacaaggaacactacagagtgaaaatcactgtcactaacttgaactaccgcatgaatttcaccgaatggaacctggttgttcagtatcatcccatcctcgatatcacccagatatctggcttcaattacaagtcaatccaagtcggcaaaataagtaagtcaatctggaaccatccttttttgataaaaaaaaatgcatgtgtatgtgtgtgtatatatacttctgacctatgtctagattcgtagccaaaatttattttttttaaggacagaaggtgtatataccatctctctatcttttgctcacgaagttttttttttctccttgtatgttagatgatactacgatgctatggggagtaaagccctactatgatttgctcatgcaagctggtccgcttggaaatgtgcaaggagaactgattgtgagaaaggatttcagggcttcttccactactaacaataacaagggaagggccttcccagtccgtgtgtacttcaacggtgataactgtgtgatgccgcctccggatgcatatccagttagtattacggcttagaggcgatcgtcaagatgattgtatcgcattactatatttatggggtcatgaataaagtgtattgtcttgcctattgaagattagaagtaactataattaaattgaatctccaactagtattaagattgtcagaggtctgttattttgcttgtagataaaattctgcctatgttaacttcgatggtgtcaaagatatcaaatccatagcagattcgtggcagggg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0497700, RefSeq:Os10g0497700