Difference between revisions of "Os01g0655800"

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(Created page with "{{JaponicaGene| GeneName = Os01g0655800| Description = Similar to Acyl-CoA synthetase (EC 6.2.1.3)| Version = NM_001050288.1 GI:115438946 GeneID:4324180| Length = 8030 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0655800|
 
GeneName = Os01g0655800|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0655800

Description

Similar to Acyl-CoA synthetase (EC 6.2.1.3)

Version

NM_001050288.1 GI:115438946 GeneID:4324180

Length

8030 bp

Definition

Oryza sativa Japonica Group Os01g0655800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28384723..28392752

Sequence Coding Region

28384724..28384963,28385763..28385807,28385898..28385987,28386176..28386232,28386420..28386468
,28386908..28386984,28387506..28387545,28387625..28387719,28388113..28388277
,28388365..28388475,28388559..28388646,28389303..28389369,28389576..28389651
,28389743..28389860,28390933..28391178,28391544..28391683,28391850..28392032
,28392148..28392267,28392520..28392555

Expression

GEO Profiles:Os01g0655800

Genome Context

<gbrowseImage1> name=NC_008394:28384723..28392752 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28384723..28392752 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcacagtccacgggaatagtccaaaccgcctccatccacggcagacgcgacgcgacccgaacacgagagaggagggaagcaagcaaagcaaagcgaagcagcgagagggagaagcatacgaagaagaagaagaagaggaagaggagggcatggagatgcagcacgtggtggaggtcgagcagggccgcgcggccgccgacggccggccctccgtgggccccgcctaccggagcgccttcgccagacaacagaatgcttggtcaccgtgagattgttgacgggaaggctggtgcatacgtttggaagacatacaaggaggtgtttgacctttcgactaagattggtaactctattaggagccgtggacttgcaaagggaagccgttgtggtatctatggtgctaattgtcctgaatggattatcacgatggaggcctgcaatgctcatggaatctactgcgttccattatatgacactcttggagctggtgctgtagagtttattttgtgccatgcagaagttgagattgctttcacagaggagaaaaaaattgagcagatcttcaagactttccccaagtcagctgaattcttgaaaacaatcgttagttttgggaaggtaactcaggaacaaaaggaaaatgcctccaaatatgggctggagatctattcatgggatgaatttctttctttggcagaccaagaattcgatcttccagtgaaagcaaagactgacatatgtactataatgtataccagtggaactactggtgaccccaaaggtgtactgatctccaatgcaagcattatttgcctagtcgcaggtgtagatcggctgcttaactgtgtaaatgagcagctggagcaaaccgatgtttacatgtcttatcttccacttgctcatatctttgatcgtgttgtggaagagctatttatgttccatggtgcttccattggattttggcgtggggatgttaagctgcttgttgaagatattgggacactgaaaccaactatcttgtgtgctgttccacgtgtgcttgaccggatattttctggactccaagctaaaattgcatctgggggtttcataaagagtacattgttcaatcttgcttacaaattcaagcaatttagaatgatgaaaggagctaagcacaatgaagctgccgcaatatgtgacaaagtagttttcagtaaggtgaaagaaggtcttgggggaaatgttcgtgttattttgtccggagctgctccacttgctactcatgttgaagaatacctgagagtggtgacttgtgcacatgtcttacaaggatatggtctcacggagacttgtgctggatctttcgtctccctaccaaatcagatgtgcatgatagggactgttggtcctccagtgccaaatattgatgtctgcctggaatcagtgcctgaaatgaattatgatgcacttgcaactagaccgcgtggcgaaatctgcatcaggggagaaacagtattctcaggatactacaagcgtgaagaccttacaaaggatgttttgattgatggatggttccatactggagacattggtgagtggcaacctgatggaagtatgaaaatcatagatcgcaaaaagaatatcttcaagctttcacaaggagaatatgtagcagtagaaaatttggagaacatttatggtcttgtttctgctatagattcgatatgggtatatgggaatagctttgagtcattccttgttgctgtggtcaatccaaacaaggaagcattggagagctgggctgcagcaaatggaatcagtggtgatttggaggcattgtgtgagaaccccaaagcaaaagaatacattttgggagaactgtcaaaagtaggaaaagagaagaagctcaaaggttttgaattcataaaggctgtacatcttgaaccagtgccatttgacatggaccgtgatttgattactccaacatataaaaagaagcgccctcaattgctcaagtactaccagggaacaattgacaacatgtacagaagtgccaaatga</cdnaseq>

Protein Sequence

<aaseq>SQSTGIVQTASIHGRRDATRTRERREASKAKRSSEREKHTKKKK KRKRRAWRCSTWWRSSRAARPPTAGPPWAPPTGAPSPDNRMLGHREIVDGKAGAYVWK TYKEVFDLSTKIGNSIRSRGLAKGSRCGIYGANCPEWIITMEACNAHGIYCVPLYDTL GAGAVEFILCHAEVEIAFTEEKKIEQIFKTFPKSAEFLKTIVSFGKVTQEQKENASKY GLEIYSWDEFLSLADQEFDLPVKAKTDICTIMYTSGTTGDPKGVLISNASIICLVAGV DRLLNCVNEQLEQTDVYMSYLPLAHIFDRVVEELFMFHGASIGFWRGDVKLLVEDIGT LKPTILCAVPRVLDRIFSGLQAKIASGGFIKSTLFNLAYKFKQFRMMKGAKHNEAAAI CDKVVFSKVKEGLGGNVRVILSGAAPLATHVEEYLRVVTCAHVLQGYGLTETCAGSFV SLPNQMCMIGTVGPPVPNIDVCLESVPEMNYDALATRPRGEICIRGETVFSGYYKRED LTKDVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENIYGLVSAI DSIWVYGNSFESFLVAVVNPNKEALESWAAANGISGDLEALCENPKAKEYILGELSKV GKEKKLKGFEFIKAVHLEPVPFDMDRDLITPTYKKKRPQLLKYYQGTIDNMYRSAK</aaseq>

Gene Sequence

<dnaseqindica>2..241#1041..1085#1176..1265#1454..1510#1698..1746#2186..2262#2784..2823#2903..2997#3391..3555#3643..3753#3837..3924#4581..4647#4854..4929#5021..5138#6211..6456#6822..6961#7128..7310#7426..7545#7798..7833#atcacagtccacgggaatagtccaaaccgcctccatccacggcagacgcgacgcgacccgaacacgagagaggagggaagcaagcaaagcaaagcgaagcagcgagagggagaagcatacgaagaagaagaagaagaggaagaggagggcatggagatgcagcacgtggtggaggtcgagcagggccgcgcggccgccgacggccggccctccgtgggccccgcctaccggagcgccttcgcccgcggcggcttcccgccgcccgtcgccggcctggactgctgctacgacatcttccggtgagtggctgctgctgctgtgacgacgatgacgaggggttcctcgcctgacctccggtgggaggcggggcgggcggggcgtgggcgaggcgccaagcatcggtttgcttgaattcgtgtatgggttggttggttggggggaacattaattgatgcgtggattctgttctggcactgagattcagaggattgtttccagtggccgtatgctatttatttctggtttgcacatggaggttgggatttggtgtcctttggttcagtttcgatcttatctctcattaatgggtgacaaattctgtgcttagatttggtatgcttgcttatgttcatatgcttcaccaggggacagttagcttagattttaaaaaaagccttgccaattagttaatctttgtctgtcccataattttcagacctcctattccttatggatctgtagaattccgcgggagtgatttgtaactggaaaatcactttcagcctagccatgcaccgttgttgttcgatctgtgggtcgtaatggtgatgtcagactggtccatgttgtctggtctctttctggatatggataggaaagtacagagggaattaacaggattggtttgtcctttgcattctagttgctggcctgaattctgtcaattcttcaatttaatgacccttttctcctactgagcttctctaatttcttgatttcgacaatgtctgttcttgtgcagaatggccgtggagaagttcccagacaacagaatgcttggtcaccgtgagattgttgacgggaaggtacctcaatcactccatgtactcgtttattcccttgaaatgttataccagaaagaaaaaaaactaaataggatttttgtgctattataggctggtgcatacgtttggaagacatacaaggaggtgtttgacctttcgactaagattggtaactctattaggagccgtggacttgcaaaggtttggtcaataatttattatattttctatatatatgtcatgagatgggatgctaatttctttgaacattgttaattgaattaaacattgtatgaactttttgttcagcttggaagcaacactttgatgtattcttatatcttgattaaagaatcataccatctcattttaatttgataattttgcagggaagccgttgtggtatctatggtgctaattgtcctgaatggattatcacgatggaggtaatgttttcaatcttgttctgtagccagcttttgtctggatgcactctcatcatttcgcagcaagtaaactgtcaattttcacccattatttagtcatttttgtcttttggggcacttatgttgctgaaacaattgtaacgcttggtacttatgtctcgccaatttatgtttctgtccttttcaggcctgcaatgctcatggaatctactgcgttccattatatgacactcttggtatatatcctaacattttcttaagagcattatacacacattgacgagtttattgttttcttctatgatacttcttgcttgggggcggtggtaggtcatttagttgtgcacctgttaacattatgcttctttctctgaggaaggtagccttgatactgttaagcatgtgctcaagaactatttatggtctcctcttatggcaactatgattatgtttccagaagaatgaaaaagctttgtcacatcattagaacatattgcaaataagtttcctatgatgatcttgttgttttcttataagcaaactaagagctaaatgtcattcaataagtaaaggatctttttcctagttgacacatttagatgcataaaatgaaacgacatagtaacacatgcaactgcagcttatacctttgtattaaatatgctcttgatgcaggagctggtgctgtagagtttattttgtgccatgcagaagttgagattgctttcacagaggagaaaaaaattgagcaggtatagtttgttactttgtttcattgtctcataccagtatgtagaacttcgatgattgcattgcagtgcatcctgaatcgagaatacttgcactgttgttgaccttctacataattgtctttatctgtatgatgaatatgtaaaattaatctttattttggtgagcatctttggaaatatatctgtaaactgtccattggggaaaagctagcagtacaccaattgttcttctgtattccttaagttcatttttgtttttagttatgctttgtaaagctccatcacccgtttagatccatggaaaccttgcttcattctacttaaaaaaaatgcatgtttccaagacagttttctatagttacacaattatcttgtttcaactgtattacattgtgttatttatattttggacgacacttcgatggttgttttgcgactgtgtcaatgggttgtgggtatctcatcatatcaaagcatgctttatctctccggatgcatattgagtaatttcaacttggcagatcttcaagactttccccaagtcagctgaattcttgaaaagtaggtttcactcatccataccatcatcaagaaataacatgcttctaccatgaaattaaagatgtaatactatttgcagcaatcgttagttttgggaaggtaactcaggaacaaaaggaaaatgcctccaaatatgggctggagatctattcatgggatgaatttctttctttggtaagacatgctgccagcaattttatatgcagttcgttttgacattatcatttcttaaacataaatgcctcataatgatgtggcaatgtgcacattagtatttgtctatccacagatccttcaatacctgtataggcaaagattttgatgtaacttcatttgtataacatggaagttgaaaacgctaatttttaatgttgtttgcctacaaacttttgtcaagtttgctaactttttgttgtcaccagttactacagtctacctatggtcctaaacctctcgtagttttgtttctttctaatttggaaagttgtttcaagagttcattttacacctattttattaggatagcttttcagatattctatttttcacatgacattgtatcttcaggcagaccaagaattcgatcttccagtgaaagcaaagactgacatatgtactataatgtataccagtggaactactggtgaccccaaaggtgtactgatctccaatgcaagcattatttgcctagtcgcaggtgtagatcggctgcttaactgtgtaaatgagcaggtaagatatgccagcagccctttcattatgcatccatatataatcactgatcaatctttaattgctttaactatgcgggaatctcagctggagcaaaccgatgtttacatgtcttatcttccacttgctcatatctttgatcgtgttgtggaagagctatttatgttccatggtgcttccattggattttggcgtggggtaagcaccgttacatgtttactgatccctcttggattttgattttttgaacctgtgatgactatcttaaaaatttggttcaggatgttaagctgcttgttgaagatattgggacactgaaaccaactatcttgtgtgctgttccacgtgtgcttgaccggatattttctggtaaggagctcttgaagtgtatggaaaattattaacagtcgtcatactttttcataggcatccagtgagatatttttgtgattaagtgaggcaagacagtagatatttatcatttgatcatattgttcaatagcaattattcttagatgatattgttttaatatatacactaattaatatagattgaatctgtcattttcctttggtgaaatacttcttattggtcttaatggtgtggtttgctcttttgtttggtaaattcttagatggctggctgtctgatccactgatactcttgacatgtcatggcaaggtgtttatactaatttactcaagaaactacctaataacttggctatattgttattggtgtttcttacttcaccaaggaattctcctgtgtctaacaatagttgaatgttgagtacttcatatcttattctaatgcaaacttgaaccatatttgtgcttttggtatatgaggatcttctgtttgtttatatatgctcatgcatgaacctggtgatagttttgttctgtcgacttgaagtttgcttgtactttttaaaaggatttgatattgtcactgtgagtgtgatcttgctagagtttgctcgtgctcatggaactttcccttatttttaccctttattcaggactccaagctaaaattgcatctgggggtttcataaagagtacattgttcaatcttgcttacaaattgtaagtttactactctttgtactctgaatgtttgccttttggggaatagaaaatgtggaatagttgtttgcacttttaatattataggtccaatgtttcttctgaagttcactttatgctagtattagttaataatctgtaactatcaaattgaagtatttcacctgtcacagaatcgagtatgacctaggtattatattttgcagcaagcaatttagaatgatgaaaggagctaagcacaatgaagctgccgcaatatgtgacaaagtagttttcagtaaggtagttgaactttgcagtcgctacttcttcactcttatgtgttcttaaacttgccattcttattttagaaatttaatttatcatgcttcaggtgaaagaaggtcttgggggaaatgttcgtgttattttgtccggagctgctccacttgctactcatgttgaagaatacctgagagtggtgacttgtgcacatgtcttacaaggatatggtatatctttgtttgttatctttgtagagaaagtaggatagatgcctcacctaagaggggaggtgatctcttatatatatagctgaattacaatgaatgctagtgctgagatacaatcaatacaagtgaattacataagaccaaaggtctaggagagtaaaggtctaggagttgaacagcctatagattaataaataatcctaatacccgcccgcagtcatagcgggaggagtacgaacgcaaagactggaccgaaaatcttgtgataaaagaacacttgcaactctcttgatctatcatgtcttttctagtccatttgatcagtacaatcatttttatttagttgtatgcattagacataccatccaattaattattaaagcattataaattgatgtaactgagtaggtaaagttattttctacgatgctatatatacttgatgggataactcaattgttttgatgacaacatcactgatgttattggtctattcaatctatgctcttactagcaaaagataaactctgaaaatattaatagaaggcaattgtgttgatggaaatctctgttttttgaatggaagttttgatttgattttgttgtgcaacatgcaaagttttaaaattggtggaaaaaaatactaatctcctgggctggactggtaaccagtaggttaacggaatttaccagacaaacattcaaatattggaattcaaacaatggttactggttgttaacaagtagcattgtaccagcccgaagcagaaggtaactggtcagcaaaaaagtgcttctgttagtaaatatcaaaattattaaattacgaatttcaaatctaaattaaagtattgcagctggtttgttctggcactattcaccaccttctaaccagttatgggctggttaccagttgttttccaaacgctgtcaacatgcactagttcttaaattggtttcctccataaaaacaaacaaaagtttcctaaattgtaggtcattatcattgatccatgtaacctgaattttttttccaacagaactttgttttgaatcatttggtctcttttaggtctcacggagacttgtgctggatctttcgtctccctaccaaatcagatgtgcatgatagggactgttggtcctccagtgccaaatattgatgtctgcctggaatcagtgcctgaaatgaattatgatgcacttgcaactagaccgcgtggcgaaatctgcatcaggggagaaacagtattctcaggatactacaagcgtgaagaccttacaaaggatgttttgattgatggatggttccatactggtatgtcttgctttttcatagttttttttttctctccttatgggggctttttgtagattttagtggctgcagcagtaaaaagaatgtcagataccatttccacaattgcaataatttcatttctggagtaggattcatgttttaatattttaggccttgtaatatcaatagtaggtccacactgtgatactgagaatgggctaactagctaagcttaagcagcaattaatcagagtatacatccgctttagattgcaaggcattctactctcttttactaaactgtgcctggatgacagtactaatatgatcagctagttgcaaagagaggtttgaaaattgaaacatctgttctctgcttgcaggagacattggtgagtggcaacctgatggaagtatgaaaatcatagatcgcaaaaagaatatcttcaagctttcacaaggagaatatgtagcagtagaaaatttggagaacatttatggtcttgtttctgctatagattcggtatatggctatctgctttaaagttctctgctccttaaatttattctgcgacattgtttttgcctttttggtatcataaatgactgatgggtcattaccttctgtttctgctaaaacaatttgaaaaactttcctctgttttttttttttttgaacatctgttcagatatgggtatatgggaatagctttgagtcattccttgttgctgtggtcaatccaaacaaggaagcattggagagctgggctgcagcaaatggaatcagtggtgatttggaggcattgtgtgagaaccccaaagcaaaagaatacattttgggagaactgtcaaaagtaggaaaagagaagaaggtaatattttgattattgcttgcttttttttcctgaaaggaaattaatctcttctatatatcacgtttgtccgcttgctcctattaactccttaactttctacgtacttttgcagctcaaaggttttgaattcataaaggctgtacatcttgaaccagtgccatttgacatggaccgtgatttgattactccaacatataaaaagaagcgccctcaattgctcaagtactaccaggtattgctcattcaaattctcgtcatactgatggcatatgttgtttacatacttcacgcgtgtagaacgttctcattttgcttacttggtcctttgaatcagttttagatctcgataattctgaagctattgtccctttatttcagcagaattccactatttgttttttgtactaagaaccaaaaaaaagggttttcggacgccttacattcagaggttaactagcagctctaaatttacttcgatttgcagggaacaattgacaacatgtacagaagtgccaaatgagctcgccatgccgtctagaacatccaagatcaaaggagctgacagaagcaccaatctcatgctgtttgtatgttcatagtagggacggaaaaatgttgtaatatctcttttggaaacgtcttgacatatatgatttattcgtagaaacggggtatgcacctgtacgaagaatcgcaagcaccgtttctgtattgcct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0655800, RefSeq:Os01g0655800