Difference between revisions of "Os01g0665300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0665300| Description = NLI interacting factor domain containing protein| Version = NM_001050330.1 GI:115439030 GeneID:4326854| Length = 511...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0665300|
 
GeneName = Os01g0665300|

Revision as of 18:55, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0665300

Description

NLI interacting factor domain containing protein

Version

NM_001050330.1 GI:115439030 GeneID:4326854

Length

5118 bp

Definition

Oryza sativa Japonica Group Os01g0665300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28934551..28939668

Sequence Coding Region

28934770..28934949,28935140..28935477,28935571..28936014,28937319..28937424,28937989..28938083
,28938390..28938546

Expression

GEO Profiles:Os01g0665300

Genome Context

<gbrowseImage1> name=NC_008394:28934551..28939668 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28934551..28939668 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagcactgaggatgaagaggaactttgacgatgatgtttttagggatgagtttgattccaaacccacaaaatctatgaagatctcacattttcaagtcagcgaactagagcagtcagctgtgttgaacttgccttataaagatccccacgatgagctggatttgacaactcagttagctggccaggacattatgatcatggaagctgctagtttggatgatgctcttggaggagcatctttgctcaaggatttaatatctgaggtggcagtttcaccaaatatggagaatgatatgttagttaattatgaagacatcagatctcagttaaatgtagtaaattattttgacaaagatgaagatgcaaattctgcatcatataatagctgtaccgttaattgtcatgaagaaagctggggctcgaatgagggttgcagtctgttggacatttataatcctgatgatgctttctctttcctattggatacgccctctgagtttctgggtagttttactgcattatatgatgaagttgtaccaattgattcattggtgaatataagtggccgatgtggagtattcccacttactgagagcactacagaagccagtattggtaatgagccatgcagatctgagggggatatgctatttagtaactcagaggtgttagagtggctcaatccacatctggctgaggaggatttgcctaatctcgttgattttactgagctgaactcacatgctgtatcaaaggagcaaggggccaggaaggtcactcttgtacttgatttggacgaaacccttgttcattcgaccacagagcagtgtgatgactatgactttacctttccagtgttctttgatatgaaggagcatatggtttatgtgaggaagagaccacatctccacatgttcctccaaaaaatggctgagatgtttgaggttgttatattcacagccagccaaagtgtttatgcagatcagctgcttgacatcttggatccagagaaaaaactgttctctaggcgttatttccgggagtcatgtgtatttacaaacactagctacacgaaggatctgacagttgttggagttgaccttgctaaagttgtcataattgacaacactccgcaggttttccagttgcaagtgaataatggtatacccatagagagttggtttagcgacgactctgatgaggcattacctcagctgattccgttcctggagacccttgcttctgcggatgatgtccgacccataattgccaagaagtttggcgacaaaaaggatattgctgagattttccaataa</cdnaseq>

Protein Sequence

<aaseq>MPALRMKRNFDDDVFRDEFDSKPTKSMKISHFQVSELEQSAVLN LPYKDPHDELDLTTQLAGQDIMIMEAASLDDALGGASLLKDLISEVAVSPNMENDMLV NYEDIRSQLNVVNYFDKDEDANSASYNSCTVNCHEESWGSNEGCSLLDIYNPDDAFSF LLDTPSEFLGSFTALYDEVVPIDSLVNISGRCGVFPLTESTTEASIGNEPCRSEGDML FSNSEVLEWLNPHLAEEDLPNLVDFTELNSHAVSKEQGARKVTLVLDLDETLVHSTTE QCDDYDFTFPVFFDMKEHMVYVRKRPHLHMFLQKMAEMFEVVIFTASQSVYADQLLDI LDPEKKLFSRRYFRESCVFTNTSYTKDLTVVGVDLAKVVIIDNTPQVFQLQVNNGIPI ESWFSDDSDEALPQLIPFLETLASADDVRPIIAKKFGDKKDIAEIFQ</aaseq>

Gene Sequence

<dnaseqindica>4720..4899#4192..4529#3655..4098#2245..2350#1586..1680#1123..1279#tctctctccccccttctccgtctgcgttgtgctgcgcgagcccccggaggcgaggcgactccgcgtcgccttcccccccgagcgcgcggccggcgagaagggcgggaggcgcgggcggcgaggtgctcctcttctctctctgtgtctctcgtcggcgacctcgcgcggtagcctcctctccggtggtggtcgcgcgcgcgcggacggtcgacgagggaggtttggagggtgggggcgcgactcggggttgaattcgctcgagctgactcactccaggtaagaattgaacagcgattcgtgtttccgagcagaattgagtgaattggttggagcggttccgctgatttacggcggtgatctgggtgctctctgttcgtgatttcggggtttgtttgatgagatttcagcgtttttctttttctaattaggagatgttagtttggtagggaggttgcggtaattcgttgagatggctgccacgttgtgaattttcctttctagggtttgggtcttcgcgttggtcctaccgtgatcccacctggttgtccctcaatttcgttgcttccttggctctactgacgctttattactgccgatctagccgtagaaaattatctttctgcaatagtaccgtagctgtacaaatgatctcgtctaaagcttctgctctacttcattttctatatgcagcatgtttgctaatctttttatgttgcaagtacaaatctgttgattaaggcatgattagtaggttaatacgtctactgctatgcgattacttgcgtaactgaagaaaggaattaatttaaccattttaacggttgcacctcctttgctgttaaaagaactaaaggagtctgcttttgaggaagcaactgagtgcttgtagaaggcgtgattgaatagtaaaaactgtcttaagaaagctagatcttttctcaacggcaggcttttcttgttataggttgtactaaatgtttacgttccttcatgagttcattttaaggctgtgtctatcgaccatatatattgagatctcatatatatttctaaggtgtattctccaacttttgtatttgttctgcagagggttttatagtttcaagcacaacgctgctcaagatgccagcactgaggatgaagaggaactttgacgatgatgtttttagggatgagtttgattccaaacccacaaaatctatgaagatctcacattttcaagtcagcgaactagagcagtcagctgtgttgaacttgccttataaagatccccacgatggtaagtgactgcaggcagctctgtgggagttaaggctgattttttactgatgtggagtttctttcaactttcccttaaaatatatgtaatttagctgtactgtttattacagttctcttgaacaggaactgtgtgtgcctaatgttgcattcggaagctattttttataggtagataatttaacaactcatgtttgttaagttggttttacttagctatttggaaaatgtgtttaaattgtgcattgttagtgatcaaaggttagtgagggtgtgcatatttcattgattctatttcctttttcagagctggatttgacaactcagttagctggccaggacattatgatcatggaagctgctagtttggatgatgctcttggaggagcatctttgctcaaggtgtggcatcatcatctgatcatatattattataattattattgtcgcactttacttttgtgttcaaccgtttggcttcaatacttccatttcattattataagtttcctcttgtacttcagtttgtctctccaaactaattagtccaatgaacttctgattacaaatgagtaaccactaacttctgagttctgattatggagatataactattgcaatttctttccaaagttcattgcactaatcagtttggggagacaaactgaaatgcaagaggaaacttattataattaaatggaagtattgaagccaagaggaaactgatttgtcatttgaccttgcacttccaactagtttcagttaatgatttgttataaagggcagaaggcattgtgtttgtttcttatttgtgttatgaactaacatttgtaggctaggtatatagcttcattattttggtgtcttctctcctattttatgtctcagcactctatatcagaatcattattattctgttattttatagaatcttctgcaatgtaatgtttccatgttgatttacaggatttaatatctgaggtggcagtttcaccaaatatggagaatgatatgttagttaattatgaagacatcagatctcagttaaatgtagtaaattattttgacaaaggtaaggagcaaccctttcaccttaagtgacttaggatatatatccattaagcgaagtagcaagattaattttgctatgcgctaggtatttacacttccatgtgcgctttgcattttcatattgcaattagcaaagcatttacaatgtgatgccatagattctaagttatctgaaaaccaatcttaccaagaatagaattaaaaacaagatttctttgctagtaatgactggaatattcctttgttacttttaaattatattggactttttggtcatcagtctttatttaatgcatgattctgatcattctttgtgtatacacttttgaaaatgtgtaaaaatatgtatgctacattagcatctggtgttgcaaatttaatatgattatttctgtgcggtcaagctatacagtatacactgaattgctgatagggaattgtatataaatgatccaaatttcagaagttctactgcaagaatgccacattaatctatttatgtccacaaactggacactgtttttgtctttgtgccaacttatcacaaattctgattttgcttggctggaggatttctgatcttttaatttcattgcatctcttgctccaaaaacgatgtgccacatatgtagtttttagctgagatagcaatgcaatcatttcaattccccctagttcgaaaacctttttgtcataatgccatgtcagtctctcaacattatatcgttgaacaaacctaggatgtttgcttaaattgataacttgagatgagcttttgctgtacatgctatctttggcctctgtataaaatcatgatatgcaatatatacttgtccattctattgtggaaagagaaaggtgtgcgctggcgctatatgcaaatgatcataccagaaattcatggtgactgattgtctaggcattttgattggtattgaatctgaataatatgtgatagtggcaaatccatcaaatatatcaccagattaaacccacaagattatcattttttttgtgatagtggcaaatctattaaatatatcatgaactgcttctcttgaaagttgtccattcatctacctattgccaacggacgaattgctaattcttgcagttgtggggcagtaactgataagcatgatttgaattgtgttccttattttgtaatagctccttgaggagaaaatgtagaaatatttatttgggacatgcttatgttgaacatttagttattactactcaaaagcaagtttcagtttgtaaatgtgcgtacttatttataattatgcatggtattttttgcagatgaagatgcaaattctgcatcatataatagctgtaccgttaattgtcatgaagaaagctggggctcgaatgagggttgcagtctgttggacatttataatcctgatgatgctttctctttcctattggatacgccctctgagtttctgggtagttttactgcattatatgatgaagttgtaccaattgattcattggtgaatataagtggccgatgtggagtattcccacttactgagagcactacagaagccagtattggtaatgagccatgcagatctgagggggatatgctatttagtaactcagaggtgttagagtggctcaatccacatctggctgaggaggatttgcctaatctcgttgattttactgagctgaactcacatgctgtatcaaaggagcaaggggccaggaaggtcactcttgtacttgatttggacggtatgttgctggttttaaaagatttattattttttaggactctattgatgtttcccagagaataatatattgttatttttccttcctgtgcagaaacccttgttcattcgaccacagagcagtgtgatgactatgactttacctttccagtgttctttgatatgaaggagcatatggtttatgtgaggaagagaccacatctccacatgttcctccaaaaaatggctgagatgtttgaggttgttatattcacagccagccaaagtgtttatgcagatcagctgcttgacatcttggatccagagaaaaaactgttctctaggcgttatttccgggagtcatgtgtatttacaaacactagctacacgaaggatctgacagttgttggagttgaccttgctaaagttgtcataattgacaacactccgcaggtaaactgctgataacttgttctgcgctaatgcacttcgtgttctaaatgttgtcacttatgtttttaagaaggttcagtgttaaagtgtcctggacctacatctctgaatttttgaaatctcccattcatcaactatcgcatgaagtatccgatgagcacctgaatactaatttccatgtttcattcaggttttccagttgcaagtgaataatggtatacccatagagagttggtttagcgacgactctgatgaggcattacctcagctgattccgttcctggagacccttgcttctgcggatgatgtccgacccataattgccaagaagtttggcgacaaaaaggatattgctgagattttccaataaatgttagggatagctttttgtttactcagatagaggaacagaaacttaattaacatgttaaccgggcttgttgacctttttcttttccttttttacagtgggtggttttcataggattaagaattttggtgttagagctagttgtgaattgtacatatcctcgtatttcttaaacagttctgtacatagtatgctgccggaaatgaaagtgaacttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0665300, RefSeq:Os01g0665300