Difference between revisions of "Os01g0681400"
(Created page with "{{JaponicaGene|
GeneName = Os01g0681400|
Description = Similar to Autophagy protein beclin1|
Version = NM_001050415.1 GI:115439200 GeneID:4324394|
Length = 5714 bp|
Defin...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0681400| | GeneName = Os01g0681400| | ||
Revision as of 18:56, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0681400 |
|---|---|
| Description |
Similar to Autophagy protein beclin1 |
| Version |
NM_001050415.1 GI:115439200 GeneID:4324394 |
| Length |
5714 bp |
| Definition |
Oryza sativa Japonica Group Os01g0681400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:29826561..29832274 |
| Sequence Coding Region |
29826968..29827151,29827448..29827597,29827913..29827984,29828494..29828579,29828657..29828815 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:29826561..29832274 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:29826561..29832274 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaaggcccccgccgcggccgcggccgcggtcggcaacagggctggtggggtggatccgtcgattccgcggttcaagtgccaggagtgccaccgcgcgctcgtcgtcgtcggcgtggattccttcgccgataagctcccggctcaggccacctctgcgcatgcatcctctgttcatggaagtattatgggagctagcaggatggataattcttatgtcgtgctatccaagcaaaacaaatctcatggccatggaattcccccacgcccaccaagtgcagcagccccacatatcgaacctaaccagccaacaagagcgatggagggttcatatatagtgcttccacctgctgctgcttccatatacaagacatctacttctgaaggaggtggtgcgcagttgccaccaccaagtatcaattccagtagtttgttaccaggaaatagttttcactctaacgtgactgtattaaaacgggcatttgagattgctacgtcacaaactcaggttgagcagccaatgtgtctggactgtatgaggttgctctctgataagatggataaggagattgaagatgttaatgctgacattaaagcttatgaagtctgtcttcaacatttggagcaggaatcccacactgtcctcagcgatgctggttttcagaaggagaaactgaagattgaagaagaagaaaagaagcttaacgccgctattgaagaagctgaaaagcaatattcagaaattagttctgagatgaaggatcttgaaataaaatctaaagaatttgaagaattggaagaaaggtattggcatgaattcaatagctttcagtttcagttgacatctcaccaggaagaaagagatgcaattttggccaaaatagaagtttcacaggttcatttggaattgctgaagcaaacaaatgttctcaatgatgcattctatatttcacatgatggagtaattggaacaataaacaacttccgactcggacgccttcctaatgtacaggttgaatgggatgagataaatgctgcttggggtcaggctgctcttcttttgcataccatggctcagtacttcaccccaaaatttgagtaccggattaagattcaccctatgggtagctacccaagagtcacagatatccacaaaaatacatatgaactgtttggtcccgtgaatttattctggagcacacgttttgacaaagccatgacatggtttctaacctgcctgcaagattttgctgagttcgctattagcttggataaagagaacaatgtaccacctgagaagtcattaaagctcccatacaagattgatggtgacaaggtagggagccacacaatcttcttaagttttaataaagtggagaactggacgaaagcactaaaatacacgctgtgcaacttgaagtgggtcctctactggtttatcggcaatacgagtttcgcaccaccatctggatctttgtgtgcagcgcaatcatctaagagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MKAPAAAAAAVGNRAGGVDPSIPRFKCQECHRALVVVGVDSFAD KLPAQATSAHASSVHGSIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQ PTRAMEGSYIVLPPAAASIYKTSTSEGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRA FEIATSQTQVEQPMCLDCMRLLSDKMDKEIEDVNADIKAYEVCLQHLEQESHTVLSDA GFQKEKLKIEEEEKKLNAAIEEAEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSF QFQLTSHQEERDAILAKIEVSQVHLELLKQTNVLNDAFYISHDGVIGTINNFRLGRLP NVQVEWDEINAAWGQAALLLHTMAQYFTPKFEYRIKIHPMGSYPRVTDIHKNTYELFG PVNLFWSTRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKSLKLPYKIDGDKVGSHT IFLSFNKVENWTKALKYTLCNLKWVLYWFIGNTSFAPPSGSLCAAQSSKR</aaseq> |
| Gene Sequence |
<dnaseqindica>5124..5307#4678..4827#4291..4362#3696..3781#3460..3618#2721..2769#2213..2337#1683..1853#1116..1465#209..365#agtattatgttattatccctgacaggtgggctccacgtgtcagcgactgtttgctcgttgctgtttgctcccgcgacgacgaatccgtgccgacctcgcttccccgccggccgccatgaaattggagcttccgagaggagaaaatctcgagaagtagagagagaaaaccacagcgtgagcgagcgtgggcgtccttgattccggcgacatgaaggcccccgccgcggccgcggccgcggtcggcaacagggctggtggggtggatccgtcgattccgcggttcaagtgccaggagtgccaccgcgcgctcgtcgtcgtcggcgtggattccttcgccgataagctcccggctcaggccacctctggtacccttacgccctgtccgattcgcttcctgtcccttccctacctccggggaaaattgggcatatgattgaattgttaggaattagtgtagttctctttaagtaaaaacctaggtttgtattgggttatattagttgccgaatttctgatgaaatgagtagttgtttgttggttctagacaaatggaatccaatactgatatcgaaatatatgcattgttgagttgaatgcataagtgcaattttgttcgatttgatagtgcgacggtgagaactttacagtgcttactgaaattactgttgggattgcggattcctgtaaagctgaagttcctgtttctggtgtagtggtgtgtgtttatggtttttcctggcattactgatttgaattgaaagttggaacttaaaactactgtagtcttcgtaatggtggcagcatggtttacttagtttacgtggtatatgcttctgttgccactcttatcttcctgtggactagaggtattactctagtgtttatcagtctaatgtttatacctgcaagtttccacccaagataaatcatagaccatttcgtcatatactcagatcgaatatttttatcatttattatggctccaccacttcttgcttcgttttctctacatgttttcttttatgtaaactaatgcatcatttgtgccagagatttgtcttgaaagtaattgttagctttcagtttcttcaaagtcattgttcctatctatgcagcgcatgcatcctctgttcatggaagtattatgggagctagcaggatggataattcttatgtcgtgctatccaagcaaaacaaatctcatggccatggaattcccccacgcccaccaagtgcagcagccccacatatcgaacctaaccagccaacaagagcgatggagggttcatatatagtgcttccacctgctgctgcttccatatacaagacatctacttctgaaggaggtggtgcgcagttgccaccaccaagtatcaattccagtagtttgttaccaggaaatagttttcactctaacgtgactgtattaaaacgggcatttgagattgctacgtcacaaactcaggtacaatgcttgcttaatctgtctctatattattgaatgtctgggctcgcatgcatttgcaatttctgcaatttacttgctgctgcaattattgcatcgtaattctctctttttttgtgtgtgttgtatgtgggaagtacatttatttgcgtgacttgatggctcattgttaaatgttatatgctgataatgatgtaaatctgcaatgtacttgcaggttgagcagccaatgtgtctggactgtatgaggttgctctctgataagatggataaggagattgaagatgttaatgctgacattaaagcttatgaagtctgtcttcaacatttggagcaggaatcccacactgtcctcagcgatgctggttttcagaaggagaaactgaaggtgacaatctcttttacatatgtatgatcagctggtgattaacgatattagaaatgcaggagagcgtgctgcttgggacaatataagagaagacagaagatttagtttcttctgtataccaatcatgtacaatgtagtttaaatgaaaattaattcctcttcaacctccatcaaagaggatgcatgtcggtttagaaggacattaaaagtgtagtcttgaagaagttgcccaatagttctgtaaaaaaccttgcttgcatgataaaaaaaatagactcaacaatagtttattttgaactgatcgatggccattattttcttggaactaaacgactttgtgtttgtgccattgatttcagattgaagaagaagaaaagaagcttaacgccgctattgaagaagctgaaaagcaatattcagaaattagttctgagatgaaggatcttgaaataaaatctaaagaatttgaagaattggaagaaaggtcagttacctttccattatgttcttgttattacctcagaagtttgtctacaggggtcaggatgcagagtctcagattatttttaattcaattttgcgtgtgagtcctgatcgtgcttttttttttctttatgatgaattctggcctagaatactgtatgaatatatcagtgttacattaaaaaatattagtatattttgctcttgaaactaaaacagctcgtttctattcaaaagataacactgccacaaacacagtattatcgtattgctacaacaattatccggtggtttgtgcaatccgtaactactatgttggctatgttattcgcagagttcctgttacttgtcaaacaaagctgatgtattatatttttgaaacaggtattggcatgaattcaatagctttcagtttcagttgacatctcaccaggtatatgcctactgcaggccctataaatatctactccctctgtcccaaaatatataagcatttttagaatagtgccaagtcaaacattttaaattttgactattgatagcaaaataataaaaaaagatcaatcgtgtaaaattggtgtttctagatttatcattaaacaaactatcataatatgcaactctttttatttaaaacatattacttttatagatattgttggtcaaagtagcatcttgaagaccgtgtcaaagtccaaaaatgcttatattttgggacggatggagtacttatagaatagcatattagcaattcattattttatcaacatcttttttggtatctactcaagagtgtacagacaagcaggacgtgcattctgtcccagatctgtcatatagctcacgcagtataaaccaagtctatgcctttatggctctatggttgattttgtgatcccgtattctgttggcaaaacataaatcgcttttagaaagttttattgtttatgccttatgcatactatctgcattatcgtgctttacactgccttcttgtttgaaaatactatctttagttttggttccttatctatgtgtatgctttctgatggctaagctgtatgccaacttttatctttgatacttagaaatcgttgactaaatttttcgcttcactattcaggaagaaagagatgcaattttggccaaaatagaagtttcacaggttcatttggaattgctgaagcaaacaaatgttctcaatgatgcattctatatttcacatgatggagtaattggaacaataaacaacttccgactcggacgccttcctaatgtacaggtaattatgcaaaatttacagatataccacatctcatgtttgatcctttgttaataaatctgatacccttttcttaggttgaatgggatgagataaatgctgcttggggtcaggctgctcttcttttgcataccatggctcagtacttcaccccaaaatttgagtatccttgacatattgatgactatttattttactacaattaatccattggtcattcttttgagaaggaattcccattgatcttcccttcatcaactagttacacttatgccacatgtttcaatgcattttagtagttactccatgtagttatcctttgtcctttttatacggaaactttatcaatgaggcttaacctttgtactaggaagtgtgttatgaaactttggtttatgagactgttcatgagaaagatctggcacagatgtataagtccaaactaggaagaacaaaaggtgttatagcaatttggaaagatagtggatgcacatcaacccctcttatattgtatttcatgataggtgttgcttaagtttttcagaagttcttcttatctctcatcagtgatgtttcacaagtgcatattcaggctaaatggaaatttaaacttaattgaaggtgttcatataaacgatgacttctctttggagttcctgaacttttttctaggtaccggattaagattcaccctatgggtagctacccaagagtcacagatatccacaaaaatacatatgaactgtacgtttccccctggctaattagtattcctgtttttctttttctaaaatgaacttccagaagatttgtaatgtagcttttctaaggttcataatatgtttatctgatcattggtattgactataatttacaagaacattttgtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtaagaggaggaaggggttgtgcactttctatatttgccctatttactgacagtttgctctgggtgtgcatttttcatatttgttgtccctttgttgagcactgcagttatatcatgctaaccaggtttggtcccgtgaatttattctggagcacacgttttgacaaagccatgacatggtttctaacctgcctgcaagattttgctgagttcgctattagcttggataaagagaacaatgtaccacctgagaagtcattaaagctcccatacaagtaagatatatttcaactttatggtactgtgttacttttgaaattgagtacattttattatatgaattgcatggttcatgcttacaagttacaacacttcttctatactattgtacttagaataaaatgtgctcatcagtcatcattgaggatacttaagatggggaaggattgtgattgcaatgttctctttccttcatatgataattttacttatataagcaagagcattcctacgttatgcaagcattttcacctgtgctactgctaatttaaattactactctgtttcgcaggattgatggtgacaaggtagggagccacacaatcttcttaagttttaataaagtggagaactggacgaaagcactaaaatacacgctgtgcaacttgaagtgggtcctctactggtttatcggcaatacgagtttcgcaccaccatctggatctttgtgtgcagcgcaatcatctaagagatgatgatgtcactgacctattaaggtggtgtttggatccagggacttaactttagtccctatatttagacactaatttagagtattagatatagactacttacaaaactaattacataaatgaaagctaattcgcgagacaaatttttaagcctaattaatccataattagagaatgtttactgtagcatcacataggctaattatggattaattagactcaatagattcgtctcgcgaattagtctaagattatgaatgggttttattaatagtctacgtttaatatttgtaattagtgtccaaacatccaatgtgataaggacttgaaagttttagtcccatctaaacatggtctaaactgattgtagccgcacattgaacagatagtagcattgacgtgacatattc</dnaseqindica> |
| External Link(s) |
