Difference between revisions of "Os01g0683100"
(Created page with "{{JaponicaGene|
GeneName = Os01g0683100|
Description = Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3) (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0683100| | GeneName = Os01g0683100| | ||
Revision as of 18:56, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0683100 |
|---|---|
| Description |
Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3) (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) |
| Version |
NM_001050422.1 GI:115439214 GeneID:4324404 |
| Length |
6973 bp |
| Definition |
Oryza sativa Japonica Group Os01g0683100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:29892213..29899185 |
| Sequence Coding Region |
29892338..29892456,29893265..29893733,29896193..29896390,29896756..29897000,29897337..29897495 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:29892213..29899185 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:29892213..29899185 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtgagcgcgctcgcggggctgcaggaccacctcaagctcgcgcgggactacgcgctcgagggactctacgacacctccatcatcttcttcgacggcgccatcgcccagatcaacaagcatctaactactttggatgacgctctgattcgcacaaaatggctgaactgtaagaaagctatctgtgatgaagtagaaatcgtgaaacagctggatgctcaattaaaggcgtttaaagaagctcctggggcaaggcggtcctcgtcaccccccattcgctctaataataaatcctttgttttccaaccactggatgagtatccaacatcatcaccagcgccctttgatgatcctgatgtctgggcgccaccaagagatacaccaaatcgtagaccaacacgaggtcaatctagtacaagaaaatcctcccaagatggagcttgggcccggggtccatcaaagactggaacacctagtcgtggtgcaaaacctaatggaagtaaaggaaactctggggcaagatcatccactgcctctagcactggtgggaggaaagggaagtcaagttcaagcaaggctgattcagtgagtagcgatgctgaagaaggcaagtccaagaaggggcaatatgaaggaccagatatggacttggctgccatgcttgaaagggatgtcctggattctaccccaggtgttagatgggatgatgtcgcaggtcttagtgaggccaaaagacttcttgaagaagcagttgtacttcctctctggatgcctgaatatttccagggtattcgccgaccttggaaaggggttctaatgtttggtccacctggtactggaaagactcttttagcgaaggcagtagctacagaatgtggcacaacatttttcaatgtttcttcagcaactctggcttctaaatggcggggagagagtgagcgcatggtccgctgtttatttgatcttgcaaggttctatgctccaagtacaatcttcattgatgaaattgactccctctgcacatctcgtggagcttctggtgagcatgagtcatcaaggagggtgaagtctgaacttctagttcaaatagacggtgtaaataatagttctaccactgaagatggtcaaccaaaaatagttatggttctggcagctaccaactttccatgggatattgatgaagcactgagacggaggctggagaagcgtatttatattccacttccaaattttgaaagcagaaaggcactcatcaatattaaccttaaaactgttgaggttgctaccgatgttgacatagatgaagttgcacggaggacagaaggctatagtggtgacgaccttacaaatgtttgccgtgatgcttcaatgaatggcatgagacgaaagattgcaggcaagacccgcgatgagattaagaacatgtcaaaagatgagatctcaaaagacccagtggccatgtgtgactttgaggaagctctggccaaggttcagaagagtgtatcacccgctgatatagaaaagcacgagaagtggcaggccgagtttgggtccgcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MVSALAGLQDHLKLARDYALEGLYDTSIIFFDGAIAQINKHLTT LDDALIRTKWLNCKKAICDEVEIVKQLDAQLKAFKEAPGARRSSSPPIRSNNKSFVFQ PLDEYPTSSPAPFDDPDVWAPPRDTPNRRPTRGQSSTRKSSQDGAWARGPSKTGTPSR GAKPNGSKGNSGARSSTASSTGGRKGKSSSSKADSVSSDAEEGKSKKGQYEGPDMDLA AMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGP PGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARFYAPSTIFID EIDSLCTSRGASGEHESSRRVKSELLVQIDGVNNSSTTEDGQPKIVMVLAATNFPWDI DEALRRRLEKRIYIPLPNFESRKALININLKTVEVATDVDIDEVARRTEGYSGDDLTN VCRDASMNGMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALAKVQKSVSPADIEK HEKWQAEFGSA</aaseq> |
| Gene Sequence |
<dnaseqindica>126..244#1053..1521#3981..4178#4544..4788#5125..5283#5867..5954#6359..6640#ctcccaaaaaaattcgaatcaggcggagccacctcacctcgccgcggctgtttctcacgccgccttcccccgtcgacgcgcctcgccggaaccctaccacccggatctccgcggcggcggcggagatggtgagcgcgctcgcggggctgcaggaccacctcaagctcgcgcgggactacgcgctcgagggactctacgacacctccatcatcttcttcgacggcgccatcgcccagatcaacaagtgagctccctaccatccccccccccctccgcgaagccgccttccctactacccttctccctctctctcgattcagtcgcggttggggcgtgtgcggtgacccccgatttcgtgtgattcgcggcgtcctcccgcccccctgcggatctgcgcgtttggacgcacggctgtagatttgtgcgtggctgagccgtttgactgccgtagcttagtggattctattaaaatgtgctctgcggaaagaattgggggttgtggttgtgtcataagtttgtcgctagttcgctactttggggttgggggaaattgtcgccagttctcgttggtgaggtgtcatatgacttaggtaaaatcgagcggtttaactgggtttggtacattttgatgtacaagtgcccaaagcgacacagttaaactggggattatgattgggtgttagatatcatcaggcaatgtatgtaataacgttgaagttaggtgctccacatttgagtatctttggactttcttaagaaaaagcatccttgtttcttcaaaacatcaacaatgttcgcatcattgaacctattggacattgatgctttattcgtaggcatgtgctcacatcagaactcatacattgatgtgtaaatgtattttttaacaaaaaaaaaactgtgctgaagaaagatattcacatgcttgttcatttagtggttaaataaatgtttgaaggtaaaacactgagtatgacaaaatttgaacataacaaaaatgcatttatccttatattgatccatattatgatagataagattcgattgtgcaggcatctaactactttggatgacgctctgattcgcacaaaatggctgaactgtaagaaagctatctgtgatgaagtagaaatcgtgaaacagctggatgctcaattaaaggcgtttaaagaagctcctggggcaaggcggtcctcgtcaccccccattcgctctaataataaatcctttgttttccaaccactggatgagtatccaacatcatcaccagcgccctttgatgatcctgatgtctgggcgccaccaagagatacaccaaatcgtagaccaacacgaggtcaatctagtacaagaaaatcctcccaagatggagcttgggcccggggtccatcaaagactggaacacctagtcgtggtgcaaaacctaatggaagtaaaggaaactctggggcaagatcatccactgcctctagcactggtgggaggaaagggaagtcaagttcaagcaaggctgattcagtggtaatttctgtcaaacagttgttcttctcagttttcatttgagcaaatatgttgtgttcgtgttcttagttttctcctgtaaatgataggcaaaacacaactgttttttcttttggaatcatcaccgacttatctgcctagtgcaaaattatagattcgcaccaactagcatacaaacttcttttgtaatcagtacttctatgtatttatattgccaaacatgactgtattgttcgtttgagcatacttcttagtgtatacaaagtagagttaaccgtttttatgagatgcaagcacttgatgcaacttagtccaacttatctttctttgttcatagcacctattgttaaattgtaatttcgagttgtccctaaatctagtctagagatgttctattttaacttcaatgtaggaatattatcatgaccatctatccttagttcctactgtgctattgtattcatattgaactagcatggtggcccgcgcagattgcgcggctagcatcgttatattgtctctcatataatagcatatttgttttctcattatattattcaaatatattaaaatgacaatataattttaaattttgcagtaactttataaaactactaatgtgtaatattcatattgtattttatatacgtgttagttattaattatttttaatatcaaattttagttatttgtaaattataaatattcctatatggactctaaactcgtcttttaatatttcttttttttaattccgaattttttgtaaattatatttctatatagactctaggctctttttccaatattatttatttttatttctgaatttttattatttctaactgtatttctatgtggactctaaactcatctttcaatattctttaatttttaatttcgaatttcagttacttctaaattgtattcctatattgactttaaactcttcttcccatgtttttcttaatttcgaattttatttatttgtaaattgtatttttatacggactctaaactctacttttaattttattatgtttatttcaaattttagttagttttaaattcctatatggactttatactctacttctaatattccttactccctccgtcccaaaaaaagacaaatcctggtttccgtgtccaacgtttgaccgtccgtcttatttggaaaaattatgaaaaaaaattaaaaagacaagtcacgcataaaatattaatcatgttttatcatctaacaacaatgaaaatacgaattataaaaaaatttcatataagacggacagtcaaagttgaacacggaaacccaggatttgtctttttttgggacggagggagtattttttaatttcgaatttctattttttttcttaattcttaattgtatttctatatggattctatactctacttctaatattccttatttttaatttcaaatttctattatttcctaattgtatttctaacctggactatatactctacttctaatattccttatttttaattccgaatttcagttatttcctaattatatttctatatagactctatactctacttctaatattccttatttttaattccgaatttcagttatttcctaattatatttctatagcaattttacggtccttgaggagataccatgaggtaccatttttttctattgtaaatttggtatctcttggtacctaggtactatgaggtaccatgaggtaccaaattttacactaaaattttggtacctcatcaaggaccgtagaattgctcatatttctatatggactctatactctacttctaatattccttatttttaattccaaatttcagttattttctatttgtatttctatatggactctagtctcctcttctaatattccttgttttaaattccgaatttcagttatttcctaattgtatttctatatggactctagtctcctcttctaatattccttattttttaatttcgaatttcaactatttctaaattgtatttctatatggactctagtctcctcttttaatatttcttattttttaattccgaatttcatctatttctaaattgtatttctatatggactctgctttttctttttctccgattaatgtgagaatttctaggccattagaacgaatgtggaggctcctttttctattactttaataatataatagataggtacaaaatatgatgtactaatgataatggcattttcttaaaattaaccttctactgaagagggggaacctagagcctctatctgtttatcttcatattccaaatacaaataagggcattgaaagctttagttacataccatatacaattctttgcttatcttgtctcatccttctggataggttctacagtatgttcttctatatggtggtcaagtttcttgaaaaccatgtattttcttattattttcttacagagtagcgatgctgaagaaggcaagtccaagaaggggcaatatgaaggaccagatatggacttggctgccatgcttgaaagggatgtcctggattctaccccaggtgttagatgggatgatgtcgcaggtcttagtgaggccaaaagacttcttgaagaagcagttgtacttcctctctggatgcctgaatatttccaggtaatgatttttactgtgctattctatcagattctgtaaccttgcctgaatttatttttgatgctagccaatgttatggccatgcacatgatctggcatgtgcttgttgctgccttttacttggtagcttgaaagttagctggacttgcatacatgttatggccatggacatgatctggcatgttttggactcattcaaaacatgccactcaaatcaacatgcacccaaatcaccgtaccctcaattcagccttcaagttttgatcgtattcatttcagtcttttcttcttgcatgtgaccttgttattcagtttaaatttgttttgatcctcatcctatccatgctcactctatttctgaccagggtattcgccgaccttggaaaggggttctaatgtttggtccacctggtactggaaagactcttttagcgaaggcagtagctacagaatgtggcacaacatttttcaatgtttcttcagcaactctggcttctaaatggcggggagagagtgagcgcatggtccgctgtttatttgatcttgcaaggttctatgctccaagtacaatcttcattgatgaaattgactccctctgcacatctcgtgggtatgtgaatgctatctgtccatacatgttcatcttgtttaatgtctccaaagacaatcaaagttttctcaatactttttagcataatcatgggtgcattgttctgcccagtatataaattctttttgtttgcaagagaagctgagaagcaacatacttgtgcttctgtttctatttttctgaaaaacaaagctcaccaagaaaataaagtagagacctcattacttgcattttttaaagctactatcatcatagaagtactatgtcatcatttagaaaatactatgaccagatgtatgagctaatgtatttaccaagttttttaccaactttcagagcttctggtgagcatgagtcatcaaggagggtgaagtctgaacttctagttcaaatagacggtgtaaataatagttctaccactgaagatggtcaaccaaaaatagttatggttctggcagctaccaactttccatgggatattgatgaagcactgaggttgggaaaccctttccattcacatttgctttagaaatttattgagtctactaaataattggaaatttataagataaatcacataaattcaattatatttagtattggagcttgtttgcttgaggtgctgctattggaattagaatatcgatttcctcaaaaaaaaaaactgtggtttgggtccggtttaattttttttttgcatcacttcttatgggttaagagcgtagaatatttgaacttatggacaggcctcaaaagccttgttccaaatgtaaactccttttggggctagagtcatttatagtcaatagcacttaaacccattggtaccatcagaagtggcatgcaattatctgttactcctattagacttgacctggccatttctttatccgtcaatgcactagctacatgacattactgttaccacatactcccttcgtcccagaatatactatgtatctggacagggactaggtagctatgttttgggacagaggaagcacttttgttcttacttttaatcttccgaacggtgtccgtatacaacctctaactcttacattcttgattcactcagacggaggctggagaagcgtatttatattccacttccaaattttgaaagcagaaaggcactcatcaatattaaccttaaaactgttgaggtatgatattacttatcttttctgtgttgtaattccatcctagttccctttctgtttactccttcagcgttttatgattgcctccttaatcaaacagtgcagttcctgcacacaccataactgttgcacagcataggcagttatgtctctgaattgtgtttgctatgcatgcagtgcacatacctgtgtgatcgcatgcatatgtaatttctgtaaatgacaccttttgaccataagcttcatgcctactgtacaccataacctgttgactatcgaagttttctactcagagttgtaccttatacgtgaaaatgaccaaatactgttcgctacttgtcatctttgatgaaaaagtactgtgccatatcttctgttgtttgttaacgcctcttttatatcggcaggttgctaccgatgttgacatagatgaagttgcacggaggacagaaggctatagtggtgacgaccttacaaatgtttgccgtgatgcttcaatgaatggcatgagacgaaagattgcaggcaagacccgcgatgagattaagaacatgtcaaaagatgagatctcaaaagacccagtggccatgtgtgactttgaggaagctctggccaaggttcagaagagtgtatcacccgctgatatagaaaagcacgagaagtggcaggccgagtttgggtccgcttgaaatctccattctgttcccgttcaaatttctcagatcattgtttctccttggttgcttgtgttcgcaagtatttcattcatttgtaccgctgttatgttgtttcaacggccttatgttgatcggttgtattgcctgcgccggtgttgtatcatagagacaaaccagacagtaaactaggaagtgagaggtctctgcccgtggaactgctttgttgatttagtttcagtgtcactggcactgccgaagccaaaggttgcgtcactctgtaaccatttcgaacagttgatatccagcttccatgtttcgcacgggcagttgcgacgtgcgcgtttt</dnaseqindica> 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