Difference between revisions of "Os01g0685500"
(Created page with "{{JaponicaGene|
GeneName = Os01g0685500|
Description = ATP-dependent DNA ligase family protein|
Version = NM_001050433.1 GI:115439236 GeneID:4324149|
Length = 6435 bp|
De...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0685500| | GeneName = Os01g0685500| | ||
Revision as of 18:56, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0685500 |
|---|---|
| Description |
ATP-dependent DNA ligase family protein |
| Version |
NM_001050433.1 GI:115439236 GeneID:4324149 |
| Length |
6435 bp |
| Definition |
Oryza sativa Japonica Group Os01g0685500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:30017119..30023553 |
| Sequence Coding Region |
30017261..30017466,30017777..30017894,30019289..30019388,30019475..30019560,30019666..30019827 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:30017119..30023553 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:30017119..30023553 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ctcagaaagcttatttcatgttggtcaaaggttatatatacattgtttggtaatcggaaacgcccactattaagctgcaaaagcaattacacgctgcttgcttggtgtaaaaatgttttacatgcatatcaatatgaattatttgttgaatttatttacaatatcagaaaacttacggtgtttttctgcagcctattgaactgctcacttcggcaaagaagaaagtacatccacgacttgttccaggagaagccaggacattttgagttagctcagcaacttactgtagaagcagatgaagcttctgtggataattctaccactttggagagaatgaacacctttttcaaaatggcatgccagtcttcttgtgagggtattatgctgaaaatactggatgttgatgctggatattctgcttccaagcgctgtgattcatggttaaaggttaagcgtgactatgttggcttgggtgatagcctggacttggttccaattggtgcatggtatggaaatggtcggaaagctggatggtatagcccttttcttatggcgtgctacaaccctgaatacgaagagttccaaagtgtctgccgcgttatgtctggtttctcagatgagttctataaagagatgaaggagttctattctggcgacagaatactgcccaagaaacctgtttactacaaaacagacgagcttccggagttgtggttttctgcggaacaggtttgggaaatccgaggtgcagacctcacgctatcccctgttcaccatgcggctattggtctggtccatccgtcgcgtgggatctcagtgaggatgccgaggtacatacgctctcgtccagatcggagtccagaggattgtagcacggctactgatgttgctagcttgttcaaagctcagacccggaagatggaggtcagcagcgatggccaggacacaagtcactaa</cdnaseq> |
| Protein Sequence |
<aaseq>LRKLISCWSKVIYTLFGNRKRPLLSCKSNYTLLAWCKNVLHAYQ YELFVEFIYNIRKLTVFFCSLLNCSLRQRRKYIHDLFQEKPGHFELAQQLTVEADEAS VDNSTTLERMNTFFKMACQSSCEGIMLKILDVDAGYSASKRCDSWLKVKRDYVGLGDS LDLVPIGAWYGNGRKAGWYSPFLMACYNPEYEEFQSVCRVMSGFSDEFYKEMKEFYSG DRILPKKPVYYKTDELPELWFSAEQVWEIRGADLTLSPVHHAAIGLVHPSRGISVRMP RYIRSRPDRSPEDCSTATDVASLFKAQTRKMEVSSDGQDTSH</aaseq> |
| Gene Sequence |
<dnaseqindica>6088..6293#5660..5777#4166..4265#3994..4079#3727..3888#2220..2278#1879..2104#agaattactaacgggttgactcaatcactgaaattgtttaatggtagagcatttacctgtgagtacaagtatgttcattgctctctaagagattttaatcttttaacccccatggtatataaccacaccatgattgcattctgccagttttaaacctgaaatatccaccccccccacgcgcgcacacacacacaacccctagacacatgagttttccatgactccttagatggaggggaatgttaattcttgacggagtttctgccatgaagagccaatagctaggaaaaaaaatgcgccataaatttattattctgactctactctttcttaagcaaactaatggattatatttgaggaattatgacaaccgtggatcatgaaggaagaaagaatggatgagtagcttccctattctcatgctagttgttgagcttgaatttcataagaagtcgtctactcttcttagtaaaatctgaaatctatatctatgattaacataagaagttcaaaccttttcttgcatgaccccttatcaacttcttaaatatctccagtttgtaggaattttgacttagcaagcatatctttcctgccaaataattgcactctatttattaatgttgcttccaggtatgatggtcagcgagcccagattcacagatcaaatgatggatctgtgcaaatattttcaaggcaaatgaaagagtcaacctctcgatttcctgatctggttggcatgatcaaagagctgtgcagcatcgaagtatccagctttatacttgacgccgaggtaagttttgttcgtgaggaactcacatttgtttgtttcttcataatataacactccttcaccttaggcttgtgtttcttgtgcttgtgcattcaaaacaaggttgtgggaatcgataggaagaaaggaaacaaactgatgtcattccaagagctgtcttcaagagagagagggagcaagcactcctcaattgcaattcagaacataaaggtgatgccattattcttttatttacaaagtattgtgcttgttactttggaatcttgaacattattttcgggcaatatttttgcatgatgaattcctataattatagaatttcacaaggaaacataatcaaagaaatttgtactcaattgtttatgtttgtcaccaacaactttaattgaatgaacaagtccctttgcagttaccgggttttttcagtgcttattacttatcactaaaataatcagatatgtagttgacaaaatttcaacttctgtggtagatattcctacagttccacaaatacgtatattttttttgtggttcatagttcatagcatgaatcagttttcctagcatagaggatgttcatttgcactgaaatgcctgtgatgaaagttgaaagaaagtgtgtggatagacaaatagttagtggcagtacctattaggaatgcataatatgcttactaatccatcttttttttttgtaactgtgtcttttttatctgactatattttgactactttgcaggtagacatttgtgtgtttgtttttgatatcatgttctgcaatggacaaaggtaacactatggagtatttcatatacatagactacctatataatataatatcaaacttgacacttttttaaataagaaaaagacaaggaaagtacttttgcaaccacccctctctgatgggtcgatgtgagagcttattgctttactcacaaacataattttcttatggttgttagtttaatttagtttggctgtgccacgcttcaactaccaagctcgtgaccttctagttttaagtcatcagtgatttaatggtacacacaaatgagaaaaccttgtgcttagacggtaaatgactcagaaagcttatttcatgttggtcaaaggttatatatacattgtttggtaatcggaaacgcccactattaagctgcaaaagcaattacacgctgcttgcttggtgtaaaaatgttttacatgcatatcaatatgaattatttgttgaatttatttacaatatcagaaaacttacggtgtttttctgcagcctattgaactgctcacttcggcaaagaagaaagtgtatgtttcagtaccatcttaaagtacttgaaaaacatgtataaggcagggcatactttttgagtgaatcccttagaaaatgtgatagcacttctttctgcatttttcactgcagacatccacgacttgttccaggagaagccaggacattttgagttagctcagcaacttactgtaagttgtatccttttctgacttgcatttttatggatgtatttactgttctaaacattcgcttcttacttgacctaatgatatcgccttttacatcttgccataatatcatccttccttttcatttcatttccttctgttaattgaaattgcatgagattaatagctacgttgccatcttcttagcatttttccacttcgatgtgaaggtaaccggctttatgaattaaagaatcaggctataattttaaccaatcaatcaactagaatggacaacacaaaatcaaagcgcttgccttttcaagcaacgcaaatacaagatgcggaactaaccagttttaacattacctactcacaactaattcgttaacattaccactaccattcctgtgctccttcatgatagtatgatactcgaaacgttgcacctcttagtgtaaagcagcagattcatggtaactgttatgaatagcacttgtattcatcaaggcaaaatgattacaccggatattatccctatgttgtaccacacacttagcaatacgaacattccttttcatattttcttttgtttgaattttgccaggtaaatgcccagtttggtcccccgaatttccccctaggctaatttcctcccttgcgtttcaaattggcctcctagatccctcaaatttgtctatttgggccaaacatatcatttgggttgtcttgttccgcatcaaggtgcttatgtataatgattcctccctcatcataagcaaaagctggatattgccacaatgagagctgcacataatggttgaaaaaaagagactgggataaataaaatcaaggggagcgaaatagcaaatccaatttcaggatgtaagggtagaatagacatttgctcaagatgaatcagctacaagaacacataaaatcaaatttgactcaaatgtgtcaatgtgaattaccaataagtcctttggtctagcacagaaagctagaggacctagatggccctttctgagttgccaatgtgagttttggggggaacttcaaggaccaatcaatatctcaaaaaaaaaaaggaccaatcaagaattcacccatggttgccatcttttacactactatgagtaaaacaactagtcacatggcctgaaatgttggacttcagcatctccgctttgtaatggagtgcctagaaacaaaatgacataggtagcctggggtgttggggggcatgtaccaatgcaggacactgtagtgatgcttttgttatgttttcagggtaatgtctcaacatatactatatgcttctgctcagcttaaattttttagcatacttgttctagaataataacctactgcattttggttgacatcgcaaataactttggcctttatctctgtgcttgcttctttatcatatgttcatgcatggtacacatgaatcaattttacaggtagaagcagatgaagcttctgtggataattctaccactttggagagaatgaacacctttttcaaaatggcatgccagtcttcttgtgagggtattatgctgaaaatactggatgttgatgctggatattctgcttccaagcgctgtgattcatggttaaaggtgcaacctatgtattatactaaacaagtgcctgaatctgaatgtttttcattatatctgaaactataaaactatgcatcatgtattccatgtgtgttgttgcaggttaagcgtgactatgttggcttgggtgatagcctggacttggttccaattggtgcatggtatggaaatggtcggaaagctggatggtacgtttggttcctgtgcatataacctctcttttccccttaccatacttcttgccccaatgctcttctcttctctacatttacaggtatagcccttttcttatggcgtgctacaaccctgaatacgaagagttccaaagtgtctgccgcgttatgtctggtttctcagatgagttctataaagaggtatagatttggattcttggtttatcaaatcatgcaatacttttgcatagtagcatactagctttacaaattacatctttaagcacatcatgtccacacctgcttacatgcttgaatataatttttgggaagctatacaaatcgttgttcagtttcttgatattctgagtgatttgataaaatgacatgacaaattaaagaatgaaggtagttttgagaaaacaagtggaatgaaagttcttcagatattatcatattaggttaatatacaactaataatggaaattagactaacagtggagtgattgtatagctattcctataatgaaattgacttcactgagagctctctaggcggaggacgaaaaaaagatgaggtatggctcatgaattagcatgagagtcaacctagcaataatggaaaaaaatcttaattgcaccatattgtaccacacaatattaagcatgacaacaacccctcgtcacattccatcactaaaatttacctcaactaatgaagtttcagggatagccaaaggaggatagacataaataatctgcaaaacagatagtcctagcaaagatcgattaatagactatctttaaggtggataagacaaatagcaaagattgaatcagcctgttgctctgctgctgctgctggcctgccctgctacttgttggcccgccgactgccgcgccggctctggccctgatgcgccgcgctgcccaactgcagccacagcctgcagccgcccttgccgactgccgcaggtgcgcccaacggccagtggctggtggacttccgctgctcgactgctccgcctgtcgatgtgccacctcccgctcgcccatgctgtcgcctgtcgtcactcatcagctggacgccggctcgacgccgccaatcgcgcgagatggggaatcaatggagatggttagatggggaatttactagggtttaatagtcaacaagatggtgagatggggaaccaatatgggcctccaattcaacggcgagaggcccagcagcaagaacgccttcgcctgtcggccgtcgctcgctcgtctcgttgagtcatcgttctcccgagcggctacgccgcgctctgctctgccggcaggagggtagggggtactggcggatggcgcaaggtatggcgagcgccagacctcgccctaccgagtcctccgccactgtctctagcaaatgcggcttttatgtatttgtttgagatctctagtgaacatgtcacagaaaggataaattatgtgtccattgtggtttattgttttaaactcaacacagttcatatctatcatctggactttgtgttattctggaaattaatcttctgtgtatatatgccttgtgattttgtaatgttgagctacagatgaaggagttctattctggcgacagaatactgcccaagaaacctgtttactacaaaacagacgagcttccggagttgtggttttctgcggaacaggtttgggaaatccgaggtgcaggtaattacgcccctctggttaacatacatttagtagcaaattatagtgcataacccgtttgggaatgggctggaaccgtgccctgccaaataaggcattaataggatattcccgtggacagcatagataacttatgcatttgacttataataatgctatttatggattgatatttagttgtaaaatatttatgatttattctaggaacatataagcctttaaacttaaaaatgttttatctttttttgttgaaatccactgcaatgtatgggagtgtaaaatcacgatttgggtgtatcttcttttgcagacctcacgctatcccctgttcaccatgcggctattggtctggtccatccgtcgcgtgggatctcagtgaggatgccgaggtacatacgctctcgtccagatcggagtccagaggattgtagcacggctactgatgttgctagcttgttcaaagctcagacccggaagatggaggtcagcagcgatggccaggacacaagtcactaagccagagctgatccgaccccgctttacagtgtttttgtagatgtacagatgcagaatagtagcaagcaaacgcctttgttttccaccttctatactactgtgtaaataaatggcactagcttttcaacgtatttttcactag</dnaseqindica> 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