Difference between revisions of "Os10g0500500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os10g0500500| Description = Similar to 30S Ribosomal protein S18| Version = NM_001071515.1 GI:115482773 GeneID:4349032| Length = 3336 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0500500|
 
GeneName = Os10g0500500|

Revision as of 21:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0500500

Description

Similar to 30S Ribosomal protein S18

Version

NM_001071515.1 GI:115482773 GeneID:4349032

Length

3336 bp

Definition

Oryza sativa Japonica Group Os10g0500500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19541495..19544830

Sequence Coding Region

19541616..19541742,19542298..19542593,19542962..19543057,19543689..19543748,19544293..19544538

Expression

GEO Profiles:Os10g0500500

Genome Context

<gbrowseImage1> name=NC_008403:19541495..19544830 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19541495..19544830 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagctcggcgctgaggcgatccctccgacgcctcctcccttcgagcccccctcccccgtcccccgcctccgccgccgccgccgcgaccttccgccgctccttcctgtccggtggcggtgacggggtgggagagagcgtggaagaatttgagaagaggatgctgagtggcttggatgatgggcttgagaatcgccgtggaggatctgactggggttggaggggtgggttccgtaacaggggtaactctagcagcatcttggctgaattgtgcacgggcttcgattccttagaagatggtttggatgagaagttggatgaggcgtcccgcacctttcatgtgacggaggagtatgaggacgatgactatgattacaggccagatgtgactttcaggcgaggctcaacttataatgtcaaggatcttgaccttacaagacctgcagccgcaaagaaccctcctaggccacagtttcaaacaactacagaggaggttttaaagaaagccgattttaggaatgttagatttctggccaactttcttacagaagctggcattataatcaagaggagtcagactcgtataagtgcgaaagctcagcgtaaggttgcaagagagattaaaaccgcccgtgcattggggctattgcctttcacaacaatgggccaaagaccattcatttatggcagatctgtggaggtgaatctttcagaggaggaatatggttacgactttgtagatcggagggcaggtgagcctgatgagaatgcagacgacgctgtgcctgatgaggacgttgcgcctggtgtggagaatgcataa</cdnaseq>

Protein Sequence

<aaseq>MASSALRRSLRRLLPSSPPPPSPASAAAAATFRRSFLSGGGDGV GESVEEFEKRMLSGLDDGLENRRGGSDWGWRGGFRNRGNSSSILAELCTGFDSLEDGL DEKLDEASRTFHVTEEYEDDDYDYRPDVTFRRGSTYNVKDLDLTRPAAAKNPPRPQFQ TTTEEVLKKADFRNVRFLANFLTEAGIIIKRSQTRISAKAQRKVAREIKTARALGLLP FTTMGQRPFIYGRSVEVNLSEEEYGYDFVDRRAGEPDENADDAVPDEDVAPGVENA</aaseq>

Gene Sequence

<dnaseqindica>122..248#804..1099#1468..1563#2195..2254#2799..3044#agggtcccaaacgcaaaagatcccaaacccctaaatcacccgctccccagtccccacctcctcctcctcctcctctcgctggtgtctcgggtggcggcgcggcgcaccacctcgcggcgagatggcgagctcggcgctgaggcgatccctccgacgcctcctcccttcgagcccccctcccccgtcccccgcctccgccgccgccgccgcgaccttccgccgctccttcctgtccggtggcggtgacggtgagaaccccccccccccctgccgcctcctcctcctgatcgagaattcctctcgaacggatccctccatgcgatattccctaatataagttgtgtcgaatcctgacctggatggagttgttcgtgcttgcccacaccttcgccatttttcgttgtagttatccatcgggttgaatcgagtggctggagatgtaggtttaacgcagatttgcagccacatatgctgcttataagccaatttttaatttttaaatttaattttagagttgattttgtgttttttttcgttgtagtttttttatagcatttgcttttgaatagctaagaacacatatataaaagttgtactcataaattatgtttttgttgacaataagcgattcggatatgcatatgcataagcgaaaagatgaggctgttgatgtagagctttcgcgtgcaaaatcccaattgcgatgacagtactagtgattgtttgaggagttgatgcctaaaaaagatgtcccaatagtactagtgttcttatgcttgttttggttggcttatccggcgcaggggtgggagagagcgtggaagaatttgagaagaggatgctgagtggcttggatgatgggcttgagaatcgccgtggaggatctgactggggttggaggggtgggttccgtaacaggggtaactctagcagcatcttggctgaattgtgcacgggcttcgattccttagaagatggtttggatgagaagttggatgaggcgtcccgcacctttcatgtgacggaggagtatgaggacgatgactatgattacaggccagatgtgactttcaggcgaggctcaacttataatgtcaaggtaagagggatttctgtttttcacatcattgttgaagtatacaaagagcacatgccttgtgcactatttaggattacatttatcctgaataagtattctggaactcagcggtaaatttgtgagctagaacaggttgtgatgtgttgtatatgtacacacaaatttacatcttttgctggatacatgcttgtcaaaacagagaaattcctattatgatacactaatgcctaaacaattgaaaacttagaaaatgtgactcttagtattaattttagtttacctttttatatctgtttgctcattccatggacatactgtagtggaatgagtcttctaacagcatgtttatcacactctactgcatgcaggatcttgaccttacaagacctgcagccgcaaagaaccctcctaggccacagtttcaaacaactacagaggaggttttaaagaaagccgattttagggtttgtacatctgcctgacaaactgtgtaaatagtctgcagtttattttttagcttttaatggaattataggttttgcattactttgtcaccttgtattcttgtaaactatagagtgtttagccagttaaccagcatgaatttcagtaacacataatggtggtatgctgtgactaatttcaagaacggtatgtcatttgaggaagtcataacttagatgatgatagcatgtgatctactttctatcctagaagttataacatttgagattctggtattttatttaccgctgttgtgtttgaattttaacaataactaaaatagtttactgtagtgggttgatatgttgcttgttaacctacttatttgaattattgcctcacattattctaagatgacatttggatgcaaatactggaacacggtaactatcaaagtcgaaatcattgggatgtatgtaggcatgtatttcaagtttcaacgtgtaaaacgagtgtgcatggttgaaaatgtacaattcagaatgcagaaaaaacaaacatagttttacatttgaatgatacaataacaaacaatgatcttgcctgtatattaatagctgcagtttttgattacttggttgttccttgcagaatgttagatttctggccaactttcttacagaagctggcattataatcaagaggagtcaggtaataaggaacttttcccctttctgtgaatagaaatttgggtaatgacactcctgatgtatggtaataattcatcatgctattttagatagctttcaaattgatattttcagagtagaatggtctctataagaaaggattgccagagttcagatagcaacttttattcaatgcatgcacagggactcaaaggtttccaatattctaaatgtaacttttgatcactagacataaatattgtcttgtttgtatagttcatgcattgctgatgatgctgttaatgagatatctttgttgattcttgttggacgtggtcttttcagtgcttagttctaaagtaacacaatatcataattaaggtgccacgtagcaccatctctcctcggcaactctcagcgtagtgtcttttgtggtatcttgtttagttctttttagggtataccttcatgttttgctgtatgagtctgtttcacaaatgcacacgtaattatgtatttatataaatgctttgccatggtttctaacttattgatctgcttttcagactcgtataagtgcgaaagctcagcgtaaggttgcaagagagattaaaaccgcccgtgcattggggctattgcctttcacaacaatgggccaaagaccattcatttatggcagatctgtggaggtgaatctttcagaggaggaatatggttacgactttgtagatcggagggcaggtgagcctgatgagaatgcagacgacgctgtgcctgatgaggacgttgcgcctggtgtggagaatgcataagcatttttcaagggcttgccattctgcaatgctctgcatttcttctgttactcattcgacacggttccacatgccttcctgcctgatagtcatctactcttgcccggatcatagcccaggttcaataaattgtagtatttcgcatgttatgtacactataatctcggtttctggttttgcttgttgtgacatgatcagcaaaatttttggcttgctagtctccaggttggagatcatgtgccccacctaacattaacatgaaaatgatccagacgagatccagtccttaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0500500, RefSeq:Os10g0500500