Difference between revisions of "Os01g0691600"
(Created page with "{{JaponicaGene|
GeneName = Os01g0691600|
Description = Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2)|
Versio...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0691600| | GeneName = Os01g0691600| | ||
Revision as of 18:56, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0691600 |
|---|---|
| Description |
Similar to DNA repair helicase XPB2 (EC 3.6.1.-) (XPB homolog 2) (ERCC3 homolog 2) (RAD25 homolog 2) (AtXPB2) |
| Version |
NM_001050471.1 GI:115439312 GeneID:4325640 |
| Length |
8162 bp |
| Definition |
Oryza sativa Japonica Group Os01g0691600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:30301430..30309591 |
| Sequence Coding Region |
30301539..30301554,30301661..30301771,30301899..30302067,30303429..30303651,30303736..30303792 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:30301430..30309591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:30301430..30309591 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccggcggcgacggcgatcgcgcccgcgcgccgaagcggcacaagtcctcggcgccgtcgaggtcgattgacgagaccgccgaactggactacaccgatgacgtcgatgacgacgtccgcgatgccgatagggaggtgaagaagagggacttcaccaagctagagctgaagccggatcacgcgaacaggccgctctgggcctgcgccgatggccgcatcttcctggagacgttttcgcccctatacaaacaagcctacgatttcttgatcgctattgcggagcctgtttgcaggccagaatccatgcacgagtacaatctaacaccccactcactatatgctgcggtctcagttgggcttgagactagcactataatcagtgtcatgagcaagctctccaagactaaactgcctcgtgaaataattgattttatccatgcatcaactgccaattatggtaaagtgaagcttgttctgaagaagaatcgatattttgtggagtctccattccctgaggttttgaagacgcttctgaaagatgatatcatttgcagagcacggatatctcctgaggattccgttggggcaccttcatttactattagcaaaacagctggtgaaatggctagtggccatgaggacttattagatggaatggaactggctgctgcaactgaagacaaggaaacacattcttttgaaattgatccttctcaggttgagaatgtgaagcagcgttgcttgccaaatgcactgaacttccccatgctggaggagtacgattttagaaacgacacagtgaatccagatttggagatggaattaaagccccaggcacgcccaaggccatatcaagaaaagagcctcagcaagatgtttgggaatggcagagcaaggtcaggcattattgtgttaccttgtggtgctggcaagtccttggttggtgtatctgctgcatgtcgtatcaagaagagttgtctatgtttggccacaaatgctgtatcagttgatcaatgggcatttcagttcaagctttggtcaactataaaagatgaacatatcagccgttttacatcagataacaaggagaaattccgtggaatggccggtgtagttgtgactacatataacatggttgcatttggaggtaaacggtctgaagactctgagaagataattgaagaaattcgaaatagggagtggggcttgctcctaatggatgaggtccatgttgttcctgcacatatgttcagaaaggtcatcagcattacaaaatctcactgcaagcttggtcttactgctacacttgtgagagaggatgaacgcatcactgatttaaattttcttattggaccaaagctgtatgaagcaaactggttggatttagtgaaaggtggatttattgcaaatgtgcagtgtgccgaagtttggtgtcccatgaccaaagagttctttgctgagtatttgaaaaaagaaaattcaaagaagaagcaggtcctctatgcgatgaacccaaacaaattcagagcttgcgagtttctaattcgattccatgagcaacaacgtggggacaagataattgtgtttgccgataatctatttgcactaactagctacgcaatgaagctccgtaaaccaatgatttatggttccacaagccatgttgagaggacgagaattctgcatcaattcaagaacagctcagatgtgaatacaattttcctttcaaaggtgcagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAGGDGDRARAPKRHKSSAPSRSIDETAELDYTDDVDDDVRDAD REVKKRDFTKLELKPDHANRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPES MHEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREIIDFIHASTANYGKVKLVL KKNRYFVESPFPEVLKTLLKDDIICRARISPEDSVGAPSFTISKTAGEMASGHEDLLD GMELAAATEDKETHSFEIDPSQVENVKQRCLPNALNFPMLEEYDFRNDTVNPDLEMEL KPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNA VSVDQWAFQFKLWSTIKDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSEDSEK IIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFL IGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQVLYAMNPNK FRACEFLIRFHEQQRGDKIIVFADNLFALTSYAMKLRKPMIYGSTSHVERTRILHQFK NSSDVNTIFLSKVQ</aaseq> |
| Gene Sequence |
<dnaseqindica>110..125#232..342#470..638#2000..2222#2307..2363#2877..3020#3098..3178#4185..4272#4738..5075#5170..5245#5333..5526#6005..6168#6239..6320#ggcgacgagaagacgaaactgccccgtgcgccgccaacatctcccctctccggctaccgccgccaccgcgccgccgcgctcctcgctcctcgctccagggcttccggccatggccggcggcgacggtgaggaagcaaaccctaagcggcaccatccccggcaccggcgcccccccgttctgtcctatataccgcatctcccttacaccgttcccccctctcccctctgcaggcgatcgcgcccgcgcgccgaagcggcacaagtcctcggcgccgtcgaggtcgattgacgagaccgccgaactggactacaccgatgacgtcgatgacgacgtccgcgatggtaacaccgcgcgctcgaatccgccctaaactcaccgcccctcccccaatgtatgagggtttgcacggaacattgaactgattggggatttttgttttgtgggggttggaactttgattcggtgcagccgatagggaggtgaagaagagggacttcaccaagctagagctgaagccggatcacgcgaacaggccgctctgggcctgcgccgatggccgcatcttcctggagacgttttcgcccctatacaaacaagcctacgatttcttgatcgctattgcggagcctgtttgcaggtcaacttcagtcacctctagcctcaacattaaccttagtaccttaattgcatagtaggtttggactttcctgagactgaaattgcatccaccaagtggagtttagtccaaatctcaatatcttatacacttagaagccactaagttattgttaattctctcttatcttgtgaagtcacatcatctcaactgtttttagtttttttttcctttttgtggtttatcaaaggttcagattgtgctcaagcacaaagcaaaacctcctagctacaaaacaaaccacctcacatttcatgtttagcattttggtatgcaaatttcctgcagcattcatggggttccatctatgtggttgatttcccccaaaattagcatggtttcagcattcatgttggaataggcttgtttttgtcatgcagtgaaacagaagttgaatttagtgatattatcttcattgagagctgtggggatcatatcatattctgagggtttcactactttatcttttagggactttggtactgccatgtgattactcaatttgattttctgtgaaccacttggatataatttgtttagaataggttaatttgtttggaatttgaggggaaaaccaatggtttgtaatggaactaaccatgtattacttgaaaatggtgagcacagctatgtgataggcatatcattgtgccattagattgtttgaatagatttaatatgccccatgtggctatctagaacctagaaagtatactgacatatataagttgcaaccaagttgatgaccccagcatgacttcaagagagcataaccattccgttgttactgtcaaagtaaattctagccttctaggattctttagtttgagtgatgggatggtgggttaaggagattattagtcctttttttcttaagttaagatgggactgagtttgacctgaagtctttctgcaaaacaaaatgatgcctatactccgatggacgagatgatcaaattggtcgtcttttttatttgaacttcttttgaaatactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcactcatagtactttaagtgtgatttatatctcatacatttgcataaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaatggagggagtatatgtgcatggttgagtgcctgaaatgtattactttgtcaaagggtttctgattttccgttaaactatttgattttgacctttggtggtgcaggccagaatccatgcacgagtacaatctaacaccccactcactatatgctgcggtctcagttgggcttgagactagcactataatcagtgtcatgagcaagctctccaagactaaactgcctcgtgaaataattgattttatccatgcatcaactgccaattatggtaaagtgaagcttgttctgaagaagaatcgatattttgtggagtctccattccctgaggtcataccatacttccgtgattaaaaaatattcttttttgtctattattttctatttatgtgagctgcgatatctcatctccaggttttgaagacgcttctgaaagatgatatcatttgcagagcacggatatctcctgaggttattcatctgttttgtgcacttgaatagaattcttatggcaatatactagtagcaaagtcgtgccttcctacccattatcttatgcgagctctagtctgtctggtgttactacattgtctgcgtgaaaccatcgtgtaacttctatcaatgcaagctgatttctatgttgttatctaaggccctgtttgattcagcttaggattattataatctggattattaggagtaagctgaaacaaacaagtagattattatgatagattattataatctgtaagccatattactataatctaataatctcctctggaggagctttttccagattattgggtggctaaagacccactaccctcagatgccttcaataatctagagaaacaaacaactcgcagcttattttatgttagcttattataatctagcttagagtaatccaatttaataatctagattacaataattttaagctgaaacaaacagggcctaagtccattctaatttatccaggattccgttggggcaccttcatttactattagcaaaacagctggtgaaatggctagtggccatgaggacttattagatggaatggaactggctgctgcaactgaagacaaggaaacacattcttttgaaattgatccttctcaggtcatgcatttacttcaattagaatctcacgaaaaattttcggtgatggagactgatgtttaattcatgtcatgcaggttgagaatgtgaagcagcgttgcttgccaaatgcactgaacttccccatgctggaggagtacgattttagaaacgacacagtaagttctttgcatatcaagagacatgcataatttttagtccgtataatcatattgtccatgcaattggtctgtattgaaccagagaaaaccacaatgggggctgacccaactttgcctcgtcaaaattttaaaaaacaatttttacctttgcacccatggaatttctcccaccaccacttctgctatacaagatattgtacataccaattcaatgggggctagttctttttttgctacaccaaacataaatgctataagcaaaacaaaaacttctaagcaatagaagtgtttatttactgtattgttatctctagacattgcacagcgatgtattaatagagaagatccaacttcatatatatggataatgaaaagtaagcttttagattgcagaatcacagatgttcaggcttagtttggtggtgctgaaaacaactaacacatgttttctgatgtatatagtgcagctaaacatattattctaaaagaagggtagtccaatattgaaatcaaagaatgattcgaaatctggagcatcggaacacatctttaggagcccagcagaatgagcatatatacctcagaaatgaattccatgtcaaaatcaattaatatttttggtacattacatgacagctctcattagtgtatactgtaaaaaaactctcattagtgtgcaaagcctttttttttaattaaatccatatataagagtaagagaaaaaacagttcattaagctttgcttagagcattttctgttttttagcatttcgtttttggtaaaacttgtatatccaacacagcacaactagatacgacatcgttgaccctatttccacttgaaaactgtggtattcttaagaatcaaaatatatttacttcttatgttagtaggaaccttacagtattaccattttgtggttatgcagctgtttaggggcatgaccatgtacatatatttgctatattattcagaattaaaatctgatgtcttaattgtaggtgaatccagatttggagatggaattaaagccccaggcacgcccaaggccatatcaagaaaagagcctcagcaagatgtttgggaatggtaactttattatgcaatttgcacatgaatattgaatttgtaaatttgaacaactggtaaataactgcaaaccgatatgaagtttgggaacgttaattttcaaatgactttgagtctttaagtatgctgtttccttgccggttttacctaatcacgtactgattcacatccagatctaatgacagaacaaacgcgtagtgttacagtaataagaaaattagaatatcctagtaaaaatgttgtcagtattgtttgaagtgtaggaactaaagggatgtggtggggaactgtgtttaccaagagtgaaaactaaaattgctagtggcagtcctcttgcttgtgtcgttaattagcaatttattcccttcatttgctatttttcacttcaaattttcattaacttacaaggacttaacagattatatgcttctttcctcattgaatattttttttatgattttacaggcagagcaaggtcaggcattattgtgttaccttgtggtgctggcaagtccttggttggtgtatctgctgcatgtcgtatcaagaagagttgtctatgtttggccacaaatgctgtatcagttgatcaatgggcatttcagttcaagctttggtcaactataaaagatgaacatatcagccgttttacatcagataacaaggagaaattccgtggaatggccggtgtagttgtgactacatataacatggttgcatttggaggtaaacggtctgaagactctgagaagataattgaagaaattcgaaatagggagtggggcttgctcctaatggatgaggtgggatatccattagtgatatttgaggtgtttaatattaaatatttcaggtcttcacacatgtccatgttcttctttttatttgtgtttgcaggtccatgttgttcctgcacatatgttcagaaaggtcatcagcattacaaaatctcactgcaagcttggtcttactggtcagtttcgatttatatccctacatatgattttaccattcacttttatgtaggtattctaagtaactcagattactgtaactgcagctacacttgtgagagaggatgaacgcatcactgatttaaattttcttattggaccaaagctgtatgaagcaaactggttggatttagtgaaaggtggatttattgcaaatgtgcagtgtgccgaagtttggtgtcccatgaccaaagagttctttgctgagtatttgaaaaaagaaaattcaaagaagaagcaggtgaatctttattgaagttcctcgatatgccttttccatattaagattcatgtctttatttttgcaatataaagtccacatgttccaatttctagtatagctttttgtgatactccttccatttagaatgtaaaatgttttgctattgttattagtcaaaacttctttaagtttgactaagttcataaataactaaagacgtagctatattttcaacaccaaacaaataatattataaaattatattcaattgtggatttaatgaaattaatttggcattgtgaatcttattacattttttctatatataaacttgatcaaacttggagaagtttgacttaggagaaaaccaaatcatcttacattaaaatgttggttttcttgtgctttgtacatgccagacatgaatttattggtcaatgtgcttgtttatcaaatcttgtcatcttcgaggattgcactaaccctggcctatcaggtcctctatgcgatgaacccaaacaaattcagagcttgcgagtttctaattcgattccatgagcaacaacgtggggacaagataattgtgtttgccgataatctatttgcactaactagctacgcaatgaagctccgtaaaccaatgatttatggttccacaaggtgattctcattttatacagatgtttgtgttccattagttatatgcttatatctgcttgaaaacattcagccatgttgagaggacgagaattctgcatcaattcaagaacagctcagatgtgaatacaattttcctttcaaaggtgcagtaactgatattctgattcaaaacatacttttgtaaattcaaccatcatcatcttaactgcatatctactgtcacttaggtgggtgataactcgattgatattccagaagcaaatgtgatcatacaaatttcatctcatgctggttcacggcgtcaagaagctcaacggttgggacgtattctcagggcaaaggtaaaatggattgaatctgatgattagttcatggaacagaatgatgttaccatgatacttctctttgtatctaaaattcatcataaaatgttaatgctttttatataataaggattagtgagaaaaataaaatgcatgatggatcaaactaatattgttcttatataattctggctgaagatatcaagcatgctcacatttgcttaaatgtttttaaagcttgttggaatctgtaactatttaatttgattttagtatacaagttatatatgtaataatttattatcgtgttgtaaatacagctctggaatctgaaagaatagttttgtgtaaaattagttgcagtatgttatatgctagttatgactaaggaatcacgtgtccaatcagatgatggaagcattagatctcaaactgctgcagtcatgttctaagataatactttctattgaaatgtcattggatcttgataattactgtgacatcagggtaagcatcaagacaggatggctggtggaaaagaagaatacaatgcgttcttctactctcttgtatcgactgacactcaggtgagtctcaccactgtgtctcttttggcatatcaattttcttgtttgtgaaatccaccaacaatggcgatttgtcaaaagtcaaaactgtatatgaccatgactttttttttattcatgcaggagatgtactactcaactaaaaggcaacaatttcttattgaccagggatatagcttcaaggtaaacttgcgagcttctatatgttgaaaaaaatcgattgtttggcttgattcctactgtaacatttcatttaccaggtgatcaccagcttgccgccacctgaagaattacctaacctgaaatattacacacttaatgatcagcttgaacttttggcacaagtaggtgttttctgtacctgttgtttgtaagctgctacttctttatttctaattgtgcaagcttgcttgtaaactcacttcgccacttaaaccagttgctgagtgcaagggatgacatgattggcattgagcacttggaagaggattctgatggcaaggctcttatgaaagcacggcgatctgctggatcaatgagtgccttttctggatcggggggaatggtctacatggagtacaggtgcttcttctttccgcttatatttcgtttttacgtcaattatttgatttcattattctatttactcaattctaacttgtgagctcttttcatccagcactggtaaggggaaggctggagcttccaagaaaccgaaggacccttcaaagaggcattacctgtttaagaagcgttatcaatgatcttgataaccggcgttgtttccttcctttgcctatctcatctgcaaaaatactgaatacgagttatggttaaggaattccaatgattaacgtggagtgggggaggttcccattagcgcatcgaccagcatttttgttaacttgccgagatatttgcatcaacatccaacggcaataagcacttatttggtcgcacgcccttgtgtttgctaatgagaaaaaacttggcatttgccttggtcctgaagatgtaaatactgttgatgcaaatacttctgtaaggcttatatgacatctagttattttccggacgtgaacgc</dnaseqindica> |
| External Link(s) |
