Difference between revisions of "Os01g0766000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0766000| Description = Multi antimicrobial extrusion protein MatE family protein| Version = NM_001050888.2 GI:297597670 GeneID:4325491| Len...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0766000|
 
GeneName = Os01g0766000|

Revision as of 18:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0766000

Description

Multi antimicrobial extrusion protein MatE family protein

Version

NM_001050888.2 GI:297597670 GeneID:4325491

Length

2094 bp

Definition

Oryza sativa Japonica Group Os01g0766000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34025900..34027993

Sequence Coding Region

34025900..34025974,34026065..34026151,34026247..34026365,34026474..34026712,34026807..34026863
,34026958..34027044,34027133..34027674,34027766..34027993

Expression

GEO Profiles:Os01g0766000

Genome Context

<gbrowseImage1> name=NC_008394:34025900..34027993 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34025900..34027993 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgccggcggggacggaagcggctggcgctggccaccgcaagaactggcggggcgagtccgggaacctgtggcgcatcgccgggccggtgattctgacggagatcttccagttcctcatcgggttcgtcaccgcggccttcgtcggccacatcggcaaggtcgagctcgccgccgtctccgtcgtcaacggcgtcgtcgagggcctcgccttcggcctcctgcttggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcggatgctgggcgtctacctgcagcggtcgtgggtcatctgcctcgccacgtcgctcgcgctgctcccgctctacctcctcgcgtccccggccctgcgcctgctccggcagtcggcggccatctcgtcggtggccggccggtacgcgcggtggtgcgcgccgcagctgttcgcgtacgccgtcaacttccccatgcagaagttctaccaggcgcagagccgggtgtgggccgtgacggccatctccgccgccgcgctcgccgcgcacgcgctgctcaactggctcgtcgtcgccaggctcggccacggcgtcgtcggcgcggcgctcgtcggcgacgtgtcctggtggctgctcaacgcggcgcagttcgcgtacctcgtcggcgggtcgttcccggaggcctggagcggcttctcgcggaaagcattcaccagcctcggcggcttcgtcaagctctccctctcatccgccgttatgctgtgcttggagatgtggtattacacagcagtgctgattctggtgggttgcctgaagaacccagagattcaagttggtgcgatttcaatatgcatgaactatcagctctggacactgatggttgcagttggctttaacgctgcagtgagtgttcgcgtggcaaacgaactcggcgcgaaccacccgaaagcagccaaattctcggtcatcgtcgccgtggtcacgtcggccgccgtcgggctagttttcactctggtcgctctcgtggcgaggaagcagctgccgaggcttttcacggacgacgacgtgctcgtcagggagactgcaaaactgggctatcttcttgcagccaccatattcctcaacagcatccagccggtgctatcaggggtggcgattggggcagggtggcagtcatcggttgccttcgtaaacattggctgctactatctcgttggtctgcctattgcagccgtttttggcttcaggctgagccttaatgcaacagggatttgggtggggatgctgatcggaacaatcctgcagactgttattctgcttgtcatcctctacagaaccaaatggcagaaagaggccatgctagcagaggagcggataaaggtgtggggagggggtgttgagctgccaaccattcaagaagcaagttga</cdnaseq>

Protein Sequence

<aaseq>MAPPAGTEAAGAGHRKNWRGESGNLWRIAGPVILTEIFQFLIGF VTAAFVGHIGKVELAAVSVVNGVVEGLAFGLLLGMGSALETLCGQAVGAGQPRMLGVY LQRSWVICLATSLALLPLYLLASPALRLLRQSAAISSVAGRYARWCAPQLFAYAVNFP MQKFYQAQSRVWAVTAISAAALAAHALLNWLVVARLGHGVVGAALVGDVSWWLLNAAQ FAYLVGGSFPEAWSGFSRKAFTSLGGFVKLSLSSAVMLCLEMWYYTAVLILVGCLKNP EIQVGAISICMNYQLWTLMVAVGFNAAVSVRVANELGANHPKAAKFSVIVAVVTSAAV GLVFTLVALVARKQLPRLFTDDDVLVRETAKLGYLLAATIFLNSIQPVLSGVAIGAGW QSSVAFVNIGCYYLVGLPIAAVFGFRLSLNATGIWVGMLIGTILQTVILLVILYRTKW QKEAMLAEERIKVWGGGVELPTIQEAS</aaseq>

Gene Sequence

<dnaseqindica>2020..2094#1843..1929#1629..1747#1282..1520#1131..1187#950..1036#320..861#1..228#atggcgccgccggcggggacggaagcggctggcgctggccaccgcaagaactggcggggcgagtccgggaacctgtggcgcatcgccgggccggtgattctgacggagatcttccagttcctcatcgggttcgtcaccgcggccttcgtcggccacatcggcaaggtcgagctcgccgccgtctccgtcgtcaacggcgtcgtcgagggcctcgccttcggcctcctggtaaaaaatcacgccaggacggtcagtattgatgtgatcgatcatcgctaggcattttgttcatggcgcctgtcgcgctcgttttgatcagcttggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcggatgctgggcgtctacctgcagcggtcgtgggtcatctgcctcgccacgtcgctcgcgctgctcccgctctacctcctcgcgtccccggccctgcgcctgctccggcagtcggcggccatctcgtcggtggccggccggtacgcgcggtggtgcgcgccgcagctgttcgcgtacgccgtcaacttccccatgcagaagttctaccaggcgcagagccgggtgtgggccgtgacggccatctccgccgccgcgctcgccgcgcacgcgctgctcaactggctcgtcgtcgccaggctcggccacggcgtcgtcggcgcggcgctcgtcggcgacgtgtcctggtggctgctcaacgcggcgcagttcgcgtacctcgtcggcgggtcgttcccggaggcctggagcggcttctcgcggaaagcattcaccagcctcggcggcttcgtcaagctctccctctcatccgccgttatgctgtggttcgtagcattgtacatgcagttcaagttccatttcacggtgaaaattagcaaaatatttttttcatggatgaattggtgcctgcagcttggagatgtggtattacacagcagtgctgattctggtgggttgcctgaagaacccagagattcaagttggtgcgatttcaatatggttagtacatcaattagcaatgttctgatatttttatacctggcaacgattgaacattaagtttaaacgattcaacttactctgtcgtaaacagcatgaactatcagctctggacactgatggttgcagttggctttaacgctgcagtgaggtaacgcacttatcctatgcgttgcttccactcaactcactggtaattttctgagctcacacacatgctttgcctgtcacattttttctgtcagtgttcgcgtggcaaacgaactcggcgcgaaccacccgaaagcagccaaattctcggtcatcgtcgccgtggtcacgtcggccgccgtcgggctagttttcactctggtcgctctcgtggcgaggaagcagctgccgaggcttttcacggacgacgacgtgctcgtcagggagactgcaaaactgggctatcttcttgcagccaccatattcctcaacagcatccagccggtgctatcaggtacagaaccattctataatcaagtgaaatatatgctcaaattgcttcaggatttgacacttgttgatgcaactatgttgtgccattggtaaatggcacaaattgcaggggtggcgattggggcagggtggcagtcatcggttgccttcgtaaacattggctgctactatctcgttggtctgcctattgcagccgtttttggcttcaggctgagccttaatgcaacagtaagacagacaaagccggcggtctaaacttttatttttcagtgatgattttcttgcagggagatgtggtaaccgttgtgtactaaccaatgcaggggatttgggtggggatgctgatcggaacaatcctgcagactgttattctgcttgtcatcctctacagaaccaaatggcagaaagaggtacagtgagctcgcttcatcaaaggactagtcgaagctgatcgtctcggcttagtttcaatttttttttcaaatgtttttggacggcaggccatgctagcagaggagcggataaaggtgtggggagggggtgttgagctgccaaccattcaagaagcaagttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0766000, RefSeq:Os01g0766000