Difference between revisions of "Os10g0509000"
(Created page with "{{JaponicaGene|
GeneName = Os10g0509000|
Description = DNA mismatch repair protein MutS, C-terminal domain containing protein|
Version = NM_001071562.1 GI:115482867 GeneID:...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os10g0509000| | GeneName = Os10g0509000| | ||
Revision as of 21:11, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os10g0509000 |
|---|---|
| Description |
DNA mismatch repair protein MutS, C-terminal domain containing protein |
| Version |
NM_001071562.1 GI:115482867 GeneID:4349080 |
| Length |
5253 bp |
| Definition |
Oryza sativa Japonica Group Os10g0509000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:19999127..20004379 |
| Sequence Coding Region |
19999170..19999181,19999258..19999317,19999398..19999640,19999841..19999924,19999996..20000143 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:19999127..20004379 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:19999127..20004379 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgactgataagattcttcttgagcttgataatattcggattttactgcaagcaacagttgaacttgataaggttgcagctcgtgcaaaatatagtatagcatatgatggtacatatcctgatctctatttacccaacttcgtaaatggaacagtcagtactgctacaggcgggtctatcagtacaatttcctcagctcacctctctaagaaggcatggaaactgtgcatgccaaatgcataccatccattattgctccaacaacaccaggaaaatctgcatcgtgcaaaaaaggatgtagcaagtgccacagcagaaatccggaggaggaggatatatggacaagacaatgtagaagaagatcaactggcatctgacctcgatttaatgaaaattagggtctcccagatggagaaagaccgtccagtaccagtagattttttcattgctgaaggaactactgtattggtcataactggtccaaacacagggggcaaaacaatcagcttgaagacagttggtctggcatctttaatggctaaaataggtttatacattctagcttctgaaccagtaaaaattccgtggttcaatgctgtttatgctgacattggagatgagcagtctttgacacaatcactctccacattttctgggcatctaaagcagatcggagccattcgcgcatggtcaacttcacaatccttggttcttttggatgaggttggagctggtacaaatccacttgaaggagctgctttggggatgtctcttttggaatcttttgctgaagctggttcctttctgactctagcaacaactcatcatggagaacttaaaacgttaaaatatagcaatgatttgtttgagaacgcgtgcatggaatttgatgaagataatctaaagcccacatttcggattctctggggaataccaggacgttcaaatgcaatcaatattgctgaaagacttggtttgccctcggacataatagaaagctcacgacagttacttggaacagctggtgcagagataaacgcgttgataatggacatggaaaatttcaaacaacaatatcaacatcatcttcaagaggcacaatattatgttatgcagtccaaggagcttcacaataacttggaagtggcacagaagaacattatagaccacacttctgctcaaagaaaaagaaaggcgagagtaatttcagagtatgctgttatggctcgttccattatacgtaagaagtttcagcagttccgcgaatctgcaatagccaaaagagtgcttgaagaagagaaagctgtgcagaacgacaaacctgagagattgaaggaccctgaaccaacgagtactcctgctgtcaaaaaggcacagaacacaaacatcagcatggccacaacgaccgaaggtgaagataatgggattccggaagttggagatttagtttatgttcctaagctcaaaaacgaagctactgttgtcaaaatagactcatcgaagaacgaagtgcaagtccaagctggtataatgaagctcaaactaaaattcaaagatgtcaagattcagaagaggatctccagataa</cdnaseq> |
| Protein Sequence |
<aaseq>MTDKILLELDNIRILLQATVELDKVAARAKYSIAYDGTYPDLYL PNFVNGTVSTATGGSISTISSAHLSKKAWKLCMPNAYHPLLLQQHQENLHRAKKDVAS ATAEIRRRRIYGQDNVEEDQLASDLDLMKIRVSQMEKDRPVPVDFFIAEGTTVLVITG PNTGGKTISLKTVGLASLMAKIGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFS GHLKQIGAIRAWSTSQSLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHH GELKTLKYSNDLFENACMEFDEDNLKPTFRILWGIPGRSNAINIAERLGLPSDIIESS RQLLGTAGAEINALIMDMENFKQQYQHHLQEAQYYVMQSKELHNNLEVAQKNIIDHTS AQRKRKARVISEYAVMARSIIRKKFQQFRESAIAKRVLEEEKAVQNDKPERLKDPEPT STPAVKKAQNTNISMATTTEGEDNGIPEVGDLVYVPKLKNEATVVKIDSSKNEVQVQA GIMKLKLKFKDVKIQKRISR</aaseq> |
| Gene Sequence |
<dnaseqindica>44..55#132..191#272..514#715..798#870..1017#1276..1403#1493..1540#2211..2341#3024..3106#3654..3757#3903..3973#4380..4678#4796..4971#aagagctctagtggctaaagctgaactggatgctttatcgaaaatgactgataaggtttcagcagttgtttaatttggttttgttacttgaagtaccatttcttaaacacacttcatattgttatcttcagattcttcttgagcttgataatattcggattttactgcaagcaacagttgaacttgataaggtgcttctttattcaatattcatattgcaaatagttattgctcaatatttttttgattgaatatgttatcttacttgcaggttgcagctcgtgcaaaatatagtatagcatatgatggtacatatcctgatctctatttacccaacttcgtaaatggaacagtcagtactgctacaggcgggtctatcagtacaatttcctcagctcacctctctaagaaggcatggaaactgtgcatgccaaatgcataccatccattattgctccaacaacaccaggaaaatctgcatcgtgcaaaaaaggatgtagcaagtgccacagcagtgagtttctagatccattttattctactgcatttttccaaagaaaaaaaaaggagaagatgatgcattctgaactgggatacatttttgctttgcttctggatataaccttagttctagaacgtaacatgttctgctgtaatttgttacttctcaatatttagctatagactaattctcattttgccaacatgttttaggaaatccggaggaggaggatatatggacaagacaatgtagaagaagatcaactggcatctgacctcgatttaatgaaaattagggttagttctcacttgggggtatatactgattaatgatagtatcactggataatatatgttccagttttcaggtctcccagatggagaaagaccgtccagtaccagtagattttttcattgctgaaggaactactgtattggtcataactggtccaaacacagggggcaaaacaatcagcttgaagacagttggtctggcatctttaatggctaaaataggtaatgaagttattaacagcagcttgtttcactgctactgttgtgatcatttcctactatctgtgtttcttactcttataagctttctgtatctgcaatttatggtatgattgaatagcacattttcatatgaacttttggcataacactgaaggtatattttatactttttatatgcagtcttgaatgttcttggtgagtacacaatcagagtatcttgcataactttgtctgttaactttgcctgttctgctgcaggtttatacattctagcttctgaaccagtaaaaattccgtggttcaatgctgtttatgctgacattggagatgagcagtctttgacacaatcactctccacattttctgggcatctaaagcagatcggagtgtgttttagcatttatctcaatcaattcttcgtttctgttactgcctaaatcgttagttagtggtatgacatctgactttttatcaggccattcgcgcatggtcaacttcacaatccttggttcttttggatgaggtaagtacattattccctgtcttgaactcttgatactactattatggtctttagcaagctttgggcataattcttgtttcctctttcgattgtcaacttccctcttttattttttttctcccatataataatcggtgccaaaggctgcagactgcaattattgtctcagttatggttgtatcttcagagaacaggctgatccatattcatcttttttgttgttttttagttgttttcatgtcttgtaatctctttatcttcagcagtgttcttcttttttccaagttagttttctggtctatcacagtctatgtgcaacttcatcagtgcctaagagctagtattaatgctatcctttctgtgctttcagactttcttcatcagtcttcggttttcagactttctgtgcttcttttcttctcaatttcatttcaaggaatttcttatatattcgccaaaaaaacgatgctcatttgtgcaatgtttttagatcacacttgatattttcccaattccaagttttgacaaattcccaaacaatacatcagagaatgctatactgtgtgaccaattcatgaccaaaatgctcttgcgatgtcgcgatctataagggctttctactgaacttttacccattcctcaaaataagttggtctgttttcttgtttaggttggagctggtacaaatccacttgaaggagctgctttggggatgtctcttttggaatcttttgctgaagctggttcctttctgactctagcaacaactcatcatggagaacttaaaacgttaaaatataggtttgtaatatttcaacttgacagttttcacattatgttcttgagtaatgagcgtaactgagccttttcctttactagtcacatgcccgtgcattgcaataggatctgagcaacgtagttcaatttttttttctctttattttttcagttttgagtgttttttttctgggatgtcggatgggtggttattgagccgttcttttaggacgtaggatggggtaggaacgggaggacgacgactgtgcttttaagattgtagagatactagttcagtttacgtggcttcttttatagactaattttatgggtttttggaaaataaatcctctaattattatcatacaaataaacatctaaatgaaagtacttgacccactgaaacgtgtaatatttgtgttaccattgatgatatgatgctgtcagcaatgttggaactcagaagaaatcaggtttattctaatgcaaactgtatatgaattaggaatttgttgcacagaagtgcagttatgtgctgtgaacaattacatatagagtcattttttctcttctctactctatgcagtggtactttttctgtgacttgatggtgataaggcaccttccaaactagcttttatccaacaatctgcatagttgttaatttttttcaaaacagggctcattatattgtgcatactttcagcaatgatttgtttgagaacgcgtgcatggaatttgatgaagataatctaaagcccacatttcggattctctggggaataccaggttgctatctgttctccctctttaggaatgttgatgtttgcttgagcagttaatatatgctagaaggttcttatacttgtctttatgtggattttgtcttataaaatccagtctttcaaagaaggtcgcaacccctttcacttggtttatctgtctgattgcatttttttattctatacattgttcagcatgactaaacactgtccatcctgtttgtcttccatgctcctatggtatggaatgttgtaaatctttctgcgctaaggattaatgctatgctgaagatgtcatgttatttttccaatcagtacctacatcttttgatttctagtgaactgcacaacaggcaatatattatggttgtaatgtttgctataaaccatctgctctgagacgagtcaaactagttgaatgactttatatagttatggtaaacaagtgcctgaactgttgtctgtgctataaagcttgctcatgtttcattcttgaaattcttatgctctcatattttgttacagatgtaatttgtagtgtattacacatgtaggacgttcaaatgcaatcaatattgctgaaagacttggtttgccctcggacataatagaaagctcacgacagttacttggaacagctggtgcagagataaacgcggtaagtttggcaggaccacccgtatgggttgatattgtccttactaccataagttcatctaagttttctttgcagttggttctgttttccattaatgggaaatggaacaaggtttttctctcgttctaattttttttctttgcagttgataatggacatggaaaatttcaaacaacaatatcaacatcatcttcaagaggcacaatattatgttatgtgagaaattctctacctagacttgtgtactttacattgagaatgctgcaattctctttcccagccaacacattcttgtttggatataatgtgacatatacaaccttttgagttttcaatagaaaaaggtaaataactgattttaagttatgttgttcaatcatggtttgcatctatatgtcgatctgcctttccgagtgaacttttagttccaccacataggatcttagattctttctgatgtattagattgtatgtgtgttcatgtgactattagattctctctgatgtattagattgtacatgtgttcatgtgactatcatgtgtaactgaattagcatctgtcctgcttattaggtcgaacttttcatattaattatgcatgtgttcattgacgtgtatcaggcagtccaaggagcttcacaataacttggaagtggcacagaagaacattatagaccacacttctgctcaaagaaaaagaaaggcgagagtaatttcagagtatgctgttatggctcgttccattatacgtaagaagtttcagcagttccgcgaatctgcaatagccaaaagagtgcttgaagaagagaaagctgtgcagaacgacaaacctgagagattgaaggaccctgaaccaacgagtactcctgctgtcaaaaaggcacagaacacaaacatcagcatggccacaacgaccgaaggtaagataacttatgcgaatatgcatagcatataatttaacgcccatgcaatttcaagacaagttaatttgtgagtatttttcttctgttctgttcttctctttttttttggcttaggtgaagataatgggattccggaagttggagatttagtttatgttcctaagctcaaaaacgaagctactgttgtcaaaatagactcatcgaagaacgaagtgcaagtccaagctggtataatgaagctcaaactaaaattcaaagatgtcaagattcagaagaggatctccagataaaacggctgcgctaccacctgcattggcagagataagtatgtaaaccttgtttttatacagttacattgcttttctctgccgcatctccattctcactgtatacatctagtcatttatacacagccatgcaattgtagtagatcttcagttttcatgcagcatgtttccatcatgttatagaagttagaacccgtagaattcatctggaattgaacttgaaattgtttgaacgatcgttcgaagcaaattcgctaacaaataaagaatgtccgggaattttgc</dnaseqindica> 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