Difference between revisions of "Os01g0770100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0770100| Description = Protein of unknown function UPF0089 family protein| Version = NM_001050910.1 GI:115440190 GeneID:4325603| Length = 5...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0770100|
 
GeneName = Os01g0770100|

Revision as of 18:59, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0770100

Description

Protein of unknown function UPF0089 family protein

Version

NM_001050910.1 GI:115440190 GeneID:4325603

Length

5236 bp

Definition

Oryza sativa Japonica Group Os01g0770100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34240582..34245817

Sequence Coding Region

34240582..34240749,34241277..34241414,34241813..34242028,34242168..34242244,34243732..34244143
,34244836..34245438,34245542..34245817

Expression

GEO Profiles:Os01g0770100

Genome Context

<gbrowseImage1> name=NC_008394:34240582..34245817 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34240582..34245817 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgcggcgggtgcagacaccgacaccgtcctgcggaagcggcaactcaccgtccgcacgacgagcagcaacggcggcaatgggttccgggtcggcggcggcaagggggcggcggcggcgacgccgccggagcccgtcagcccctccgcgcggctcctggaggactttttcatcgtcgtggtgatcggcattgccacgccggtgaacgaccccgtcgcccgcgccggcatcgccgcccagttcgcgcgctacccacgcttccgcagcatccaggtgacggatgaggacggcggcaacccgcggtgggtgcggacgacgctgaacgtggacgaccacatcatctacccggagctggacatggacgcggtggcggccgacccggacaaggcggtggaggactacgtggcgtcgctgtccaccaagcccatggacgagtcgcggccgctgtgggagttccacgtgctggacttcccgacgtcggaggcggcggccaccacggcgatccgcgtgcaccactccctcggggacggcatgtcgctgctcacgctcctcatggcatgcacccgcagcgccgccgacccggcgaggctgcccgccatgccgccgcagccgacgcgcaccggcgcgatctacgcgcggcccaggccgccggcgtcggcgggcgcgctggcgttcgctgcgtggctctggtcgttcgtcgcgctggcgtggcacaccgtggtggacgtcgcgagcttcttcgccacgaccatgttcctcaaggacccgcacacgctgttcaagcgggtgaagcacggggagttccagcggaagcgcatcgtgcaccgggggcttagctttgatgacgtcaagctcgtcaagaacgccatgaactgcggcgcgcggcgtctaccattggaggcggcggcggagggcggtggccagcggccggagggcggggtgagggcggtggccacgagtgcggcggcggcggtggcgggaggttggcggcggcgagaggaagggggccgcgacgacgtcagaggaaccgatggcctggtcggcgcgcgcaaggagaggagcagccggcggccgtcggcgcctcgatgcgcgcaaggaggaggcggcggccaagaggagcggcggcggctctgggcaccaacttccttccccccagacgccgacggcggcggcggcgcagacagcaccggccactcccctcccagatctggacggaagaggggagccggccagcagcggcggcaaaggcggcgctcccctcgccctcgggtaacggcaccggacggaggtgacacggacactgacgaggatatacgtttgagaacgatcctccttgtcaatttgaggccaaccacaagcctgcatgcatacgtagatatgatcaattctggcagagaggatgaagtgaaatggggaaacgcacttggtttcataatcctcccgttcttcataggcatgcacaaggatccactagactacgttcgtaaagccaagaaggttgttgataggaagaagagctcgttagaagtggtattcactcatttagctgcagaagtgatcctcaaactttttgggctcaaggcagcagctgctatcttccatcgtatgatctctcatactaccatatcattctccaacatgatcggcccagttgaacaggtggagttttgtgggcatccagttgtcttcattgcccctagcggctatggacctccagaagccttaaccgtgaattttcaaagttacgttaacaccatgatggtaaatcttgccgtggacgaggcacaatttccagattgtcatgagcttttggatgatttttccgaatccctcaggcagataaaggatgcagctttgagcctaggaaagcatcacaccaaggcttaa</cdnaseq>

Protein Sequence

<aaseq>MNAAGADTDTVLRKRQLTVRTTSSNGGNGFRVGGGKGAAAATPP EPVSPSARLLEDFFIVVVIGIATPVNDPVARAGIAAQFARYPRFRSIQVTDEDGGNPR WVRTTLNVDDHIIYPELDMDAVAADPDKAVEDYVASLSTKPMDESRPLWEFHVLDFPT SEAAATTAIRVHHSLGDGMSLLTLLMACTRSAADPARLPAMPPQPTRTGAIYARPRPP ASAGALAFAAWLWSFVALAWHTVVDVASFFATTMFLKDPHTLFKRVKHGEFQRKRIVH RGLSFDDVKLVKNAMNCGARRLPLEAAAEGGGQRPEGGVRAVATSAAAAVAGGWRRRE EGGRDDVRGTDGLVGARKERSSRRPSAPRCAQGGGGGQEERRRLWAPTSFPPDADGGG GADSTGHSPPRSGRKRGAGQQRRQRRRSPRPRVTAPDGGDTDTDEDIRLRTILLVNLR PTTSLHAYVDMINSGREDEVKWGNALGFIILPFFIGMHKDPLDYVRKAKKVVDRKKSS LEVVFTHLAAEVILKLFGLKAAAAIFHRMISHTTISFSNMIGPVEQVEFCGHPVVFIA PSGYGPPEALTVNFQSYVNTMMVNLAVDEAQFPDCHELLDDFSESLRQIKDAALSLGK HHTKA</aaseq>

Gene Sequence

<dnaseqindica>5069..5236#4404..4541#3790..4005#3574..3650#1675..2086#380..982#1..276#atgaacgcggcgggtgcagacaccgacaccgtcctgcggaagcggcaactcaccgtccgcacgacgagcagcaacggcggcaatgggttccgggtcggcggcggcaagggggcggcggcggcgacgccgccggagcccgtcagcccctccgcgcggctcctggaggactttttcatcgtcgtggtgatcggcattgccacgccggtgaacgaccccgtcgcccgcgccggcatcgccgcccagttcgcgcgctacccacgcttccgcagcatccaggtcggtccgtgcacctgccttgccgcgcgcggcgcgcccatgagctcgccgctggtgcttgagctgacgaacggcacgagtgtgtgtgtgcgcgcgtgtgcaggtgacggatgaggacggcggcaacccgcggtgggtgcggacgacgctgaacgtggacgaccacatcatctacccggagctggacatggacgcggtggcggccgacccggacaaggcggtggaggactacgtggcgtcgctgtccaccaagcccatggacgagtcgcggccgctgtgggagttccacgtgctggacttcccgacgtcggaggcggcggccaccacggcgatccgcgtgcaccactccctcggggacggcatgtcgctgctcacgctcctcatggcatgcacccgcagcgccgccgacccggcgaggctgcccgccatgccgccgcagccgacgcgcaccggcgcgatctacgcgcggcccaggccgccggcgtcggcgggcgcgctggcgttcgctgcgtggctctggtcgttcgtcgcgctggcgtggcacaccgtggtggacgtcgcgagcttcttcgccacgaccatgttcctcaaggacccgcacacgctgttcaagcgggtgaagcacggggagttccagcggaagcgcatcgtgcaccgggggcttagctttgatgacgtcaagctcgtcaagaacgccatgaactgcgtaagcaatgttttctttagttcttagcgagcctgtttgtttgagtatagcggcatataaattgcagaaaactttaaaattaaaatttaagaatttcgtttttggtcactttctagcactactagaaaaatattccatccattccaaaatataaggcataaccacccctaactaaaagaccaagaaataattattatcatcttgtagtttggatcatcctaataaatacaatgcatgaatctaatagaattagggaacatgagagtgcatgattttaaaaaataataatttaatggagaaggggccatagttaattgcctacatgtatgcataccttatattatggaacatttaaaaaaaagtaattgtgctttatattatgaaatggagggagtaatttttagcaacattggtcttttatttttccagacgggtatgaccattggagccaaatagatgcctacaaaaatacaaatcggggtgaaacccactgcccgcctttcacaggcggaccatataagtggtccgcctgcaaaaatatggtccgcctgcgaaaatacatagcgaatacaaatagaggctacataccctagattttttctatgtcctctttccctcacctctcagctctctcccgcacctctccccacccctcacctctcctcctctccctggcgctgacggcggtgtagggcgcgcggcgtctaccattggaggcggcggcggagggcggtggccagcggccggagggcggggtgagggcggtggccacgagtgcggcggcggcggtggcgggaggttggcggcggcgagaggaagggggccgcgacgacgtcagaggaaccgatggcctggtcggcgcgcgcaaggagaggagcagccggcggccgtcggcgcctcgatgcgcgcaaggaggaggcggcggccaagaggagcggcggcggctctgggcaccaacttccttccccccagacgccgacggcggcggcggcgcagacagcaccggccactcccctcccagatctggacggaagaggggagccggccagcagcggcggcaaaggcggcgctcccctcgccctcgggtaacggcaccggacggaggtggagagccatcggccggaggaggatgccggcgccggcgggtagcgccggattttttttgttccctcgctttattttcgcaggcgggccatggacccgcatgcgaaaataacctattttcacaggcgatgggatagccgcggatgactcccccgcctgcgaaaacctttttggccgcctgtgtaaaaactatttttctagtagtgtagccttgatctaagattaggtactccactatattgactaggagtatgatattatctttgaccagtatctttttaaagaaaattacgttgttttgatgaacgtaaatagtatagttatatttagcatctaaaatgctttggtaatacaaatctttttacatatactcttttagaagtcatgtggtcaaagtatcctgctaacaagtgaaaaaagaacaaagggaatgtaaaaatttgagactaatgttttttcgttagtttggtcgagtgtcgctgtcttataaactgtactccgtaggtctttagcagtaaaaatatcttccacataggacctgctctctccgtctctgaaatagatttgtttatatttgtattattagaatatgtatgtcatattgtttattagattttttattttaaaatggataaaatattagtatacaaatatcattaaacacgaattttttttctgtctatcattttcgctccatttctatacttcacctgtttgcaagttgactgtagcaaaggacagagccctcagcaaaagctctggggagatttacgttgtgtttagttccaaaataatagatttacgttgtgtttagttccaaaataatttttcaaatttctaattttttcatcacatcaaaatttttctacacacaaactttcaactttttcatcacatcattctaatttcaattaaactttcaattttagctgcccttatttcattctctttatgtttgcctgcactctcgcagacagtcaatgatgtgctggttgggatcacgtactctgcactgtcacgatattactaacggaagtcaggtgaccaattttggctgatacagcagctgctgattggctgataactttttaagtccctatcacatcggatgtttgaacactaattataaatattaaatgtagactattaataaaacccatccataatcttggactaattcgcgagacgaatctattgagcctaattaatccatgattaacctatatgatgttacagtaaatattctctaattatagattaattaggcttaaaaattttgtctcgcgaattagctttcatttttgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaatacagagactaaatttaaatctctggatcaaacaccaccttaaattgcggcctggctgatacagtagtactagttctttactcccatgttgcttgttctcctttgcaccacgttgcttgttctcctttgcaggtgacacggacactgacgaggatatacgtttgagaacgatcctccttgtcaatttgaggccaaccacaagcctgcatgtaataattacacttgggctcaagattggccatttaagctcacaggaccaaacattgttgttgctagtatatttgtagtggtagcaattttggactggtagaatctattatgatttctttcccatttctatggccacaggcatacgtagatatgatcaattctggcagagaggatgaagtgaaatggggaaacgcacttggtttcataatcctcccgttcttcataggcatgcacaaggatccactagactacgttcgtaaagccaagaaggttgttgataggaagaagagctcgttagaagtggtattcactcatttagctgcagaagtgatcctcaaactttttgggctcaaggtaaatttgtcctttatcgtaccatcgcctcatcaggaacttgatccttatattattaacttggcaggcaatgcgataatcactttgtttctattgacaagcactggtttaattcaaaaaacaatcgagaattcaggatactccaagtataactgaatacctgatttagtatttgctgcctaaccatgctaatttagttatcaagaaaatacaattcgtaggtgtacaagattgtgatattcactagaaattgtgtacagtcccagttgttggcagtggctaacttccttgtttcctagaaagagcattacaccgccaaattttgagtcatgcgccaaaaaaacatcccctgtggatttctttgttcctaatatcattgcaacttgtgaatcaaacaggcagcagctgctatcttccatcgtatgatctctcatactaccatatcattctccaacatgatcggcccagttgaacaggtggagttttgtgggcatccagttgtcttcattgcccctagcggctatggacctccagaagtaagttcctgaaatgtatatttgccctagaattaaataattgcattaacttgttagtatgtcagatcctcaaatctatgacagggaagggtttttttgccactaaggaatgatgataccttgtttttgctatgagcatctcacttttgtcactagggctaaaaaacaaatgaatgacgaacgtcagaacatgcgatgatccttggcttagtggcaaaaacagtatgaaaaaaaaaaacccaaaaaattcccatgaaatatagcctggtagctgtctaccatatatcattaagtcatcgcgaaaataaggtaatctgactgaaactaattgctttgatccgttgaaaaaagaagtaattaagcccttgtatgacacttttataacaaggataacaagtgcatagtgatgaataatccttcagcgttgtagatggtgaaagtatttttttcactttgtcatggaatctgggtacagatgtgatgagcaagacctaatttacatctaactgtttggtttgcttgtgtaggccttaaccgtgaattttcaaagttacgttaacaccatgatggtaaatcttgccgtggacgaggcacaatttccagattgtcatgagcttttggatgatttttccgaatccctcaggcagataaaggatgcagctttgagcctaggaaagcatcacaccaaggcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0770100, RefSeq:Os01g0770100