Difference between revisions of "Os01g0794800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0794800| Description = Similar to Subtilase| Version = NM_001051040.1 GI:115440450 GeneID:4324137| Length = 3464 bp| Definition = Oryza sa...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0794800|
 
GeneName = Os01g0794800|

Revision as of 19:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0794800

Description

Similar to Subtilase

Version

NM_001051040.1 GI:115440450 GeneID:4324137

Length

3464 bp

Definition

Oryza sativa Japonica Group Os01g0794800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35415628..35419091

Sequence Coding Region

35415643..35415732,35415807..35415898,35416071..35416168,35416346..35416501,35416597..35417216
,35417309..35417382,35417493..35417744,35417838..35417955,35418056..35418227
,35418317..35418858

Expression

GEO Profiles:Os01g0794800

Genome Context

<gbrowseImage1> name=NC_008394:35415628..35419091 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35415628..35419091 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaattccactattgtcagcaacgtttggcttcagtgctgctactttgcttttggatgctgttcatcagagcgcacggatcgcgcaagctctacataacgtatctaggtgacagaaagcatgcacacacagacgatgttgttgcttcccaccatgatacactctcaagcgttcttggaagtaaagaggaatccttatcttccatcatctataactacaagcatggattctcaggatttgctgcaatgctaacagaagagcaagcagaacaacttgcagagttaccagaagtaatcagtgtgcagcgaagcaggaggtacaagacaacgaccacacggagctgggatttcctggggctgaactaccaaaaccccagtgaattactccgaaggagcaactacggagaagacataatcatcggggttgttgacaccgggatatggccggagtcgagaagcttccgcgacgaagggtacgggccggtgccggcacggtggaagggcgtgtgtcaggtcggagaaggatggggcagcaacaactgcagccgcaagatcatcggcgcgcggttctaccacgccggggtggacgaggacgacctcaagatcgactacctctcgccccgtgacgtgaacggccacggcacgcacacggcgtccaccgcggcgggctccgtcgtggaggcggtcagcttccacgggctggccgcgggcaccgcccgcggcggcgcgccccgggcgcgcatcgcggtgtacaagtccgtctggggcaggggcggcgccgggtcagggaactccgccaccgtgcttgccgccatcgatgacgcgatccacgacggcgtggacgtgctgtcgctgtccctgggtaccctggagaactcgttcggcgcgctgcacgccgtccagaaggggatcaccgttgtgtacgcagccacgaactttgggcctgcgccgcaggtagtcaggaacactgctccctgggtcatcaccgtcgcggcaagcaagattgaccggtcgttcccgaccgtgatcactctgggggacaagcgccagattgtgggacagtccatgtactactacgaagggaataactcatcaggcagcagcttcagacttctagcatatggaggcctatgcaccaaggatgatctgaacggcacggatgtgaaggggagaattgtgctgtgcatctccatcgagatatcaccacttacactttttccactagcattgaaaaccgtcctgggtgccggggcttctggcctaatctttgctcagtacacgactgatctcctgggcatcacaacggcctgcaacggcactgcctgtgttctcgtggaccttgaaagtgcaaatctgatcggctcgtacatcagcgaagcaagctcaccaatggcaaagatcgaaccggcacgcactatcacaggagaaggagtattggcgccaaaagtagcagcattctcctcgagaggtccatcggttgattaccctgatattatcaagcctgacatagctgcaccaggatccaacattttagcagccatgaaagatcactaccaacttggcacaggaacatcaatggcaacgccacatgtagcaggtgttgtcgcgctgctgaaagccctccatccagactggtccccagcggcaataaaatcggccattgtcaccacggcatctgtaactgacgaacgaggcatgccaatactggcagaaggagtgcctcggaagattgctgatccatttgactatggaggtggaaacattaacccaaacagggcagctgatccaggcctcatttatgacatcgatccaagcgattataacaagttttttgggtgcatcatcaagacatctgtcagctgtaatgcaacaacgctacctgggtatcacctgaatctaccatcaatcgctcttcctgatctcaggaatccaaccacagtatctagaacagtgacaaatgtaggcgaggttaatgcagtttaccacgctgaaatccagagcccgcctggagttaaaatggttgttgagccatctgttcttgtctttgatgctgcaaacaaagttcataccttcaaggttagtttttcacctctatggaaattgcaaggggactatacatttggcagccttacttggcacaatgaaaagaagtcggtgagaattccaatagcagtccggattaccattcaagatttctatgcagatgttgcataa</cdnaseq>

Protein Sequence

<aaseq>MEFHYCQQRLASVLLLCFWMLFIRAHGSRKLYITYLGDRKHAHT DDVVASHHDTLSSVLGSKEESLSSIIYNYKHGFSGFAAMLTEEQAEQLAELPEVISVQ RSRRYKTTTTRSWDFLGLNYQNPSELLRRSNYGEDIIIGVVDTGIWPESRSFRDEGYG PVPARWKGVCQVGEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDVNGHGTHTA STAAGSVVEAVSFHGLAAGTARGGAPRARIAVYKSVWGRGGAGSGNSATVLAAIDDAI HDGVDVLSLSLGTLENSFGALHAVQKGITVVYAATNFGPAPQVVRNTAPWVITVAASK IDRSFPTVITLGDKRQIVGQSMYYYEGNNSSGSSFRLLAYGGLCTKDDLNGTDVKGRI VLCISIEISPLTLFPLALKTVLGAGASGLIFAQYTTDLLGITTACNGTACVLVDLESA NLIGSYISEASSPMAKIEPARTITGEGVLAPKVAAFSSRGPSVDYPDIIKPDIAAPGS NILAAMKDHYQLGTGTSMATPHVAGVVALLKALHPDWSPAAIKSAIVTTASVTDERGM PILAEGVPRKIADPFDYGGGNINPNRAADPGLIYDIDPSDYNKFFGCIIKTSVSCNAT TLPGYHLNLPSIALPDLRNPTTVSRTVTNVGEVNAVYHAEIQSPPGVKMVVEPSVLVF DAANKVHTFKVSFSPLWKLQGDYTFGSLTWHNEKKSVRIPIAVRITIQDFYADVA</aaseq>

Gene Sequence

<dnaseqindica>16..105#180..271#444..541#719..874#970..1589#1682..1755#1866..2117#2211..2328#2429..2600#2690..3231#acacaacgaagaaaaatggaattccactattgtcagcaacgtttggcttcagtgctgctactttgcttttggatgctgttcatcagagcgcacggatcgcgcaaggttagcatgcctccttcacgatttgcttttcaagagattggactaagaaatgttctaaacaccctctgctatagctctacataacgtatctaggtgacagaaagcatgcacacacagacgatgttgttgcttcccaccatgatacactctcaagcgttcttggaaggtgatctctgtcactgtcagttagtttgatgactttgatcacatgatattttgtatactttcacctttatggttttgtatcaaaggttctttgatgaaccatctgaactttgaaattcaagagcttaaccaaaccatttcttgctaaccaattaaccatgttgaactttcagtaaagaggaatccttatcttccatcatctataactacaagcatggattctcaggatttgctgcaatgctaacagaagagcaagcagaacaacttgcaggtcagatgatcctaccaataaactgatatacccatccagaaaagaggatgatacatcgattcacttggctagaataccgatcatatatacttctcacattctgattctaatcgagcagtatgattatcccgataaactcagcatgtgtggtttgcttaatgcatctgatatctccagagttaccagaagtaatcagtgtgcagcgaagcaggaggtacaagacaacgaccacacggagctgggatttcctggggctgaactaccaaaaccccagtgaattactccgaaggagcaactacggagaagacataatcatcggggttgttgacaccggttagtctagagcgcacgttcaaatgtttttggtggcgccatttctgccgcaatcccattataacgcagctggtctggtggtgcacttgccacagggatatggccggagtcgagaagcttccgcgacgaagggtacgggccggtgccggcacggtggaagggcgtgtgtcaggtcggagaaggatggggcagcaacaactgcagccgcaagatcatcggcgcgcggttctaccacgccggggtggacgaggacgacctcaagatcgactacctctcgccccgtgacgtgaacggccacggcacgcacacggcgtccaccgcggcgggctccgtcgtggaggcggtcagcttccacgggctggccgcgggcaccgcccgcggcggcgcgccccgggcgcgcatcgcggtgtacaagtccgtctggggcaggggcggcgccgggtcagggaactccgccaccgtgcttgccgccatcgatgacgcgatccacgacggcgtggacgtgctgtcgctgtccctgggtaccctggagaactcgttcggcgcgctgcacgccgtccagaaggggatcaccgttgtgtacgcagccacgaactttgggcctgcgccgcaggtagtcaggaacactgctccctgggtcatcaccgtcgcggcaagcaagattgaccggtcgttcccgaccgtgatcactctgggggacaagcgccagattgtggtacgacgcacaaacgtgatccattaatcaccacacgatgtgtgctcattggtcaacggcttatcttgtccaaaaatctggctattttgcagggacagtccatgtactactacgaagggaataactcatcaggcagcagcttcagacttctagcatatggaggcctgtaagaccaaaaaaaaaaaaaaagccttcgccaatgtttttgtgcttaatttctatcaataaatcagggaatatgaagctaatgggttgttaccgttttcttgtggatagatgcaccaaggatgatctgaacggcacggatgtgaaggggagaattgtgctgtgcatctccatcgagatatcaccacttacactttttccactagcattgaaaaccgtcctgggtgccggggcttctggcctaatctttgctcagtacacgactgatctcctgggcatcacaacggcctgcaacggcactgcctgtgttctcgtggaccttgaaagtgcaaatctgatcggctcgtacatcagcgaagcaaggtagaacaaactgcaaagatacacaatgattacaatcttatgtaatgagttctaacacttcctagaacaaaatttatgatcgtgtttaagcagctcaccaatggcaaagatcgaaccggcacgcactatcacaggagaaggagtattggcgccaaaagtagcagcattctcctcgagaggtccatcggttgattaccctgatattatcaaggtacgtaactccaacttaggagaaaaacttagcctccggtagaaagccacggtgtttcctcatcttaccaatggtcttgttgctgttgcgtctatgacagcctgacatagctgcaccaggatccaacattttagcagccatgaaagatcactaccaacttggcacaggaacatcaatggcaacgccacatgtagcaggtgttgtcgcgctgctgaaagccctccatccagactggtccccagcggcaataaaatcggccattgtcaccacgggtaaccatgctagtggaaatttaaagtgtggtctgtaaatgtgattttctgcattttttcttacctctgtttcattttgtatatcgaagcatctgtaactgacgaacgaggcatgccaatactggcagaaggagtgcctcggaagattgctgatccatttgactatggaggtggaaacattaacccaaacagggcagctgatccaggcctcatttatgacatcgatccaagcgattataacaagttttttgggtgcatcatcaagacatctgtcagctgtaatgcaacaacgctacctgggtatcacctgaatctaccatcaatcgctcttcctgatctcaggaatccaaccacagtatctagaacagtgacaaatgtaggcgaggttaatgcagtttaccacgctgaaatccagagcccgcctggagttaaaatggttgttgagccatctgttcttgtctttgatgctgcaaacaaagttcataccttcaaggttagtttttcacctctatggaaattgcaaggggactatacatttggcagccttacttggcacaatgaaaagaagtcggtgagaattccaatagcagtccggattaccattcaagatttctatgcagatgttgcataacctgggtccagggtgaaacatgcaggaaataacacagcgctcatagaaacaatagagtctacaggagataccaatttccacagaactacagaagtattggttttgtgtatttctttattaccagaatacaaaaatgttcaggtctatgtttgccaacttttgaaatatcatgtacctgcccctcccacctaacgcagcatgacaatgactacagatagtttcagttttggttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0794800, RefSeq:Os01g0794800