Difference between revisions of "Os01g0810900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os01g0810900| Description = Protein kinase-like domain containing protein| Version = NM_001051122.1 GI:115440614 GeneID:4327356| Length = 7288 b...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0810900|
 
GeneName = Os01g0810900|

Revision as of 19:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0810900

Description

Protein kinase-like domain containing protein

Version

NM_001051122.1 GI:115440614 GeneID:4327356

Length

7288 bp

Definition

Oryza sativa Japonica Group Os01g0810900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36214570..36221857

Sequence Coding Region

36214570..36215258,36215343..36215402,36215875..36215940,36216643..36216841,36217058..36217307
,36217418..36217486,36218321..36218392,36218615..36218756,36219132..36219652
,36219754..36220327,36221752..36221857

Expression

GEO Profiles:Os01g0810900

Genome Context

<gbrowseImage1> name=NC_008394:36214570..36221857 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36214570..36221857 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtcagctacagctgcacggctggtaccaagctggcatggatattgtcgttgctgctcatcctggtcgcggcgacacaagtccatggcgtgtctcctggtgggtttttaaacatcgactgcggattgacaaatcgtagtacttataatgacaccgacacaactttgacgtacgtttctgacagagaatttgttgagggcggcaacggcaagagctacgatattatggcacaatacatcgcagatgctacaaatgaacaagaaaaaacgttgagaagcttccctgatggccaacggaactgttatacattaccaaccaacagtagcaagaagtatctcatcagagccaccttcacttatggaaactacgatgggctcaactcgtcagagaagggttctctgtttctctttggactccacatcggcgtcaacttctgggcaacggtgaacttgacaaactggggttcatcagatacgatgtataaagaggtgatcacagttgctccagacaaattcatatccgtctgtctgataaacttgggatcaggaactcccttcgtatctacattagacttgagggaattggatggtgcaatgttcccatttctgaatctttctgtttcaatcagccatttggctcgacaaagatatggctcggtcgatgattacatcacgagatatccaactgatcccttcgatcgtttctgggaggcagccctacgctacaaatttcccttcctcaacatgaccaccaaccaagacgtgacaaagcttcctggaaatgacgactttcaggtgccgatgcccatccttcagaaggcctcaaccataagcagcaatttctcagagtttaacgtcagcgtgatatttccggacaacatgaaaaacatcgacaacatcaacaacatcgactacaggagcttggagctgctaccaatcttccactttgccgatattggaggcaacaaccagaatagaacgtttgatatctataacgatggaaacctgatgtttcccaactacataccacccctgttccgagcggagagcacatatcagagtggtaagttcttgcgcaagaggggcctcaacttcaccctgcgcaagacgcccagctcggagctccagccgctcatcaacgcattcgaggtgtactcgcttgttcatacagacaacctcaccacttctccagacgacgttgattacatgaaagaagtgaagaagtactacagttacacaagaaactggaatggagatccatgctccccaagagagtattcctggcaaggtctggcttgcgactacgctaatggaaacaaaaatccaaggatcacccgaattaatctgtcagccagcggattaataggtggattacacatagcattcatgaaaatggcatcactggagaactttgatagttcctgtggtatccctcctactccttgtactggtttgtatcctctggaggctgtgctggaaaggttggagtttgcaggaaaatcagcagaacaagaagattattctatttatgaagaggaagctccattacatatcgacatcaaacggttcacatatgcagagctgaagctcataactaacaacttccaatcaatcattggaaaaggaggttttggcactgtttatcatggcatactggaaaataacgatgaagtagctgttaaggtgcttgtggagacatctatagcagagtcaaaagacttcctccctgaggaaatcttcagctgtcatggtcgggataacatatcaacgcagaagccgcacagggctgcaggatacggcgtcaggagatgcagcgcagcgcacgtaatccgccgtgccggacggcaacagtattgcgataggataggttctgttagccagtttccttatcagtttgttagcttgttttcagtaatttggttaatcagttatatagagaatgtatggacgtatggtcatagatatagggaattgcgaagtagtaagcaagattctcgatatgatagtagtttgaattgggaagaacgacttcacattgcacttgatgctgcacaaggactggagtatctacatgaatcatgcagcccgtcaatagttcacagagatgtgaagacacccaacatccttctggacaagaatctggtggccaagatatctgattttgggctttcacgggcttttaatgcagctcacacgcatatatctactgttgttgccggcacccttggttaccttgaccctgagtatcatgctactttccaacttaccgttaagacagacgtttacagttttggaattgtcctcttggagattgtcactggtcaacccccagtatttatggatccccaaaccgtccacttgccaaattgggtgcggcaaaagattgataagggaagcatccacgatgttgtggacaagaaactgttagatcaatacgatgccactcacctgcaaactgtgatagaccttgcaatgaactgccttgaaaacacatcaattgacaggccaagcatgactgaggttgtttctgtgcttaaggtgttgtttacggtggctatttcaagtgagaaacgatcggttacatcaacccctcaagagaagaacgtcatggatgcagacattccacggcagttccacttgatgatttctggagctacaacaacaagctacgacaacgagggcagttcctcacagtctggtcctaccggtgggatgtcagaaataagctacatttctggacggtga</cdnaseq>

Protein Sequence

<aaseq>MVVSYSCTAGTKLAWILSLLLILVAATQVHGVSPGGFLNIDCGL TNRSTYNDTDTTLTYVSDREFVEGGNGKSYDIMAQYIADATNEQEKTLRSFPDGQRNC YTLPTNSSKKYLIRATFTYGNYDGLNSSEKGSLFLFGLHIGVNFWATVNLTNWGSSDT MYKEVITVAPDKFISVCLINLGSGTPFVSTLDLRELDGAMFPFLNLSVSISHLARQRY GSVDDYITRYPTDPFDRFWEAALRYKFPFLNMTTNQDVTKLPGNDDFQVPMPILQKAS TISSNFSEFNVSVIFPDNMKNIDNINNIDYRSLELLPIFHFADIGGNNQNRTFDIYND GNLMFPNYIPPLFRAESTYQSGKFLRKRGLNFTLRKTPSSELQPLINAFEVYSLVHTD NLTTSPDDVDYMKEVKKYYSYTRNWNGDPCSPREYSWQGLACDYANGNKNPRITRINL SASGLIGGLHIAFMKMASLENFDSSCGIPPTPCTGLYPLEAVLERLEFAGKSAEQEDY SIYEEEAPLHIDIKRFTYAELKLITNNFQSIIGKGGFGTVYHGILENNDEVAVKVLVE TSIAESKDFLPEEIFSCHGRDNISTQKPHRAAGYGVRRCSAAHVIRRAGRQQYCDRIG SVSQFPYQFVSLFSVIWLISYIENVWTYGHRYRELRSSKQDSRYDSSLNWEERLHIAL DAAQGLEYLHESCSPSIVHRDVKTPNILLDKNLVAKISDFGLSRAFNAAHTHISTVVA GTLGYLDPEYHATFQLTVKTDVYSFGIVLLEIVTGQPPVFMDPQTVHLPNWVRQKIDK GSIHDVVDKKLLDQYDATHLQTVIDLAMNCLENTSIDRPSMTEVVSVLKVLFTVAISS EKRSVTSTPQEKNVMDADIPRQFHLMISGATTTSYDNEGSSSQSGPTGGMSEISYISG R</aaseq>

Gene Sequence

<dnaseqindica>6600..7288#6456..6515#5918..5983#5017..5215#4551..4800#4372..4440#3466..3537#3102..3243#2206..2726#1531..2104#1..106#atggtggtcagctacagctgcacggctggtaccaagctggcatggatattgtcgttgctgctcatcctggtcgcggcgacacaagtccatggcgtgtctcctggtggtaattatcagagctgtttctttgcgagcctgcttctttgtaatccatgctccatctgtacagttcagattacttcattatatgcagctctagaaatctgtgcatagtagtacttgatagctaaacacttactatcatatactccctccgtcccataaaaaaccaacctggtaccgaatgggacggagggagtacttcctctcaagaataaatatgtttttttaataaagaaagcttttattaatctcaaacgattacatcaaattgatatagaaccatactatgaaaacttcaggccgtttattatttctgatcatcaagttaatataatcatagcaagaacaatcaagttgatatttattgagtgttgtgaaagacggaatatggttgacggacggagagggtaccgccaaacgattaatcggaatacggacgatttatcggaatttgacggatatttaacgttatgtaaatatatgtatgtagtttataatagtttgcctttttaagatgtaaatgcatacaacaacttatgtttgaccatattcctataatattttttaaataggacatccataacgttcataacgcataggtgtacacctactaaaagaacttcaagcgtgcacatctgtttaagatttaaacaaaagattaaaataagatcaataatacataagaaatttttagatttgaaagagaattaaagggaaagaaaagaaaacaaacatataggctgcacaactagctatatactactaagttcagaatatagttaatgggccggatagttgttctgtgtactgggtcttgtgatcacagtagattatgcggccgattagtcagaaacggttgattaatcgggcaatgatggtaattagacgttctcaaacgactaatgaaaaccgttttgtaaaaatgtgacagacaactcatcgtctccgattgaacggccgtttatacggccgtatcaaccgttttccacaacactgttttattcctctcaagaataaatacgtaaacactccccatatacttagcgaccaaatatctagttgcatgatcgaactaaggagttgttaagattgtaactaaaataaatcttaccaaaatttagtaatttggcaatattttcaaaattatgacatgatttcttatgtatttatcgaagtgtggtaaaaaaaataaatggatacatatatttggtaactctaaaaaaaagatggtttgatttaaaacggtttcaatctgaacaagcccgaactcgcatgaaccttaacttgaagcacacgacatgaataaacactcgtagtaccaattttcttctccaccaagcatcggtcagtatctggtgtatatgttttaggctgttattactttttatttcagaaaactgttacttacagggaagtgtgtctgtgcagggtttttaaacatcgactgcggattgacaaatcgtagtacttataatgacaccgacacaactttgacgtacgtttctgacagagaatttgttgagggcggcaacggcaagagctacgatattatggcacaatacatcgcagatgctacaaatgaacaagaaaaaacgttgagaagcttccctgatggccaacggaactgttatacattaccaaccaacagtagcaagaagtatctcatcagagccaccttcacttatggaaactacgatgggctcaactcgtcagagaagggttctctgtttctctttggactccacatcggcgtcaacttctgggcaacggtgaacttgacaaactggggttcatcagatacgatgtataaagaggtgatcacagttgctccagacaaattcatatccgtctgtctgataaacttgggatcaggaactcccttcgtatctacattagacttgagggaattggatggtgcaatgttcccatttctgaatctttctgtttcaatcagccatttggctcgacaaagatatggctcggtcgatgattacatcacgaggtgattcaaaagttttttttttcggtttcaatcattgacgttgtaatcatagtcttcctcacaatttcaatcatttccatgtatctcctgtggtgatcaagatatccaactgatcccttcgatcgtttctgggaggcagccctacgctacaaatttcccttcctcaacatgaccaccaaccaagacgtgacaaagcttcctggaaatgacgactttcaggtgccgatgcccatccttcagaaggcctcaaccataagcagcaatttctcagagtttaacgtcagcgtgatatttccggacaacatgaaaaacatcgacaacatcaacaacatcgactacaggagcttggagctgctaccaatcttccactttgccgatattggaggcaacaaccagaatagaacgtttgatatctataacgatggaaacctgatgtttcccaactacataccacccctgttccgagcggagagcacatatcagagtggtaagttcttgcgcaagaggggcctcaacttcaccctgcgcaagacgcccagctcggagctccagccgctcatcaacgcattcgaggtgtactcgcttgttcatacagacaacctcaccacttctccagacgacggtacgattacgatcagtaacagattggggtacaaattagacgtgtgctatttatggcgcaggttcatacgatcatcgtgcacggcagcatgtggtctacaaaagaatccattagctttattgagagcaaagactactagcagagaaatgaatttaatctaaaaacagataaatgaatttttttcttaagaaaaagtagagaaatgaataattacaagttaaagataacatttaaatcataaaattatctagcgactcaataagtgaatgtctacaacttactgatcaactaatcatgcaagcccacaggttcaacaaacgcagcaattcctttattccattcatgtttgatttaattatccttctgttgctgtagttgattacatgaaagaagtgaagaagtactacagttacacaagaaactggaatggagatccatgctccccaagagagtattcctggcaaggtctggcttgcgactacgctaatggaaacaaaaatccaaggatcacccgaatgtaagtacatgacaaaaccgtaaagtacatatctattctgaaatccgaacctcataatgtcatcatgattttaacctttggagtcaatatatgctgatccaaatatatttgcctttaaatgtactattacagtcattatatgtatacctagtcatgtgtattattgtcttaagatgccatgactaaattatctgacaagtattacgatgtgttcattcgcagtaatctgtcagccagcggattaataggtggattacacatagcattcatgaaaatggcatcactggagaacttgtaagtgcttcttcttaccacattgcatccagagctaaatgaaattatgtggacactgaacacaaaaacatatatagggatttatcgcacaacaacttgacaggcgcaattccagactatcaactcaattcactcagagtgctgtaagcttcaaattaatctttagttgatatagaattttagatggatgaatcatttaaactactcttttcagcaacctatcaaataaccaacttgatggaccaatcccggattctattcttcaaaggtttaaggcaggacagcttgaattgaggtttgggaacactcccttgcatagttgcatggctcctcattgatattaaaaaaagaatctaacaaaataactactccaaaaggaaaagactaaaaccaacactggttatcacagaacaacagtatcaatcaattaaaggttcataaacaacgaccacattatcgaaaaacaactgaaaaaggtaaattgcacgtagtagactctagtgattataaatgctttagcatctacatgatttccaacaaaacagggacaaaatagatctattagcgaaggcatgcactttataaagcatgtaatagttctgcctttagagaaatggttgttcagaagcactaaaattcagaagcatgttacaatcatgatttgaaaaggttgatatagctaagtttttctttcctcagctgattctatttgttttttatctgactaataacttgtataatggcatattagactagaaggcaatcccatatgctcaaaagtcaaagataggtactgcgcaaataagaacagcacacctatcttgctcatcgcagtgatagttcctgtggtatccctcctactccttgtactggtttgtatcctctggaggctgtgctggaaaggtaaaataaaacattagtctctgaagtccttttgaatcaatgcaatgggtggtttaatgattgcttgtttggtgtacattagtaatagctgtactttcatgtaaataaaggttggagtttgcaggaaaatcagcagaacaagaagattattctatttatgaagaggaagctccattacatatcgacatcaaacggttcacatatgcagagctgaagctcataactaacaacttccaatcaatcattggaaaaggaggttttggcactgtttatcatggcatactggaaaataacgatgaagtagctgttaaggtgcttgtggagacatctatagcagagtcaaaagacttcctccctgaggtatttaacagcacaaaagtagatcgaaggccatctaaagcaattcccatatagtctatattcaagaaagatatgtatctaacttcagccctgaatggcatatcctgctgcaggtgcaaaccttgtccaaagttcatcataagaatcttgtcactttggtgggatattgccaaaacaggaagtgccttgcgcttgtttatgatttcatgcctagaggaaatcttcagctgtcatggtcgggataacatatcaacgcagaagccgcacagggctgcaggatacggcgtcaggagatgcagcgcagcgcacgtaatccgccgtgccggacggcaacagtattgcgataggataggttctgttagccagtttccttatcagtttgttagcttgttttcagtaatttggttaatcagttgtaagcctatttagaggcacaattcggaggagttaatcaagcagattcaatctctaattctctcacctcctattctctatttgctcatcccttgctgttcatcacgggtcgccgttcctccaaaccccctcgtccacgtccgccaatcacacattcatatcccatacgttcttacgccggagctcgtgacatcagcagcttttaagaggaggtttttgcctttttcctctttcaatttcttgaaatttctatcaagaagagttgactcaagtagttaagtcatacaggtctgaattgcacattgttatgatcaccaattttattttaattttctactgtgatcagtcatacttctgactcaacaaaactgaatcattcaaacctgaaatcagttcaaacagaaaagaggtcggacaattcaaggttcacattgcggaacaactcatagccatcaacagatttcgctaattactgggaacaaagtagttttcaaattttcaacaataaaacaataaatcatgtcaagctcataacgcttaattgggaataatcagctaaagcatatttgacacaggggaaaaagaaaaactatgcgataaaagtagttagggtttcaaatccagtgtcaacgggatattcttgttgcaggtgactagtctattactgctagtttgtttaaactttgaacctgtatggtcgtagatatagagaatgtatggacgtatggtcatagatatagggaattgcgaagtagtaagcaagattctcgtaagttagtatcatgtaagaggcaaacttctgctaattctacaaaactggatggacagcacgtaggtgagcatagaatgtaaaggtctggttgcctagacagctattggtaccagtcaatacatatatagacagctgactaataaaacgacaatcgtaaggcgttgtactcttaaagctacatattcttaattttccatcagttgattggtaaccttgttaattgaaatttataaaaaggtgctctacgaaagagaaggaaacctggtatccttttaaaggtcaaagtgactgcttatatacatacaaatatagattggaatattattacaccaagtgctgctattctttttttcaatatagtcatcccttgataacctcaaattatccaaatgacatatagcagtatttgcacaaccatacacatattgaatggccttctatagtactaatttcgcacactttgatgcaggatatgatagtagtttgaattgggaagaacgacttcacattgcacttgatgctgcacaaggtctgtattttgaaatacacatccaacttttttagcacatatgtgtgtgcactgtgtttaaaacatgaatttcaatggatataggactggagtatctacatgaatcatgcagcccgtcaatagttcacagagatgtgaagacacccaacatccttctggacaagaatctggtggccaagatatctgattttgggctttcacgggcttttaatgcagctcacacgcatatatctactgttgttgccggcacccttggttaccttgaccctgagtatcatgctactttccaacttaccgttaagacagacgtttacagttttggaattgtcctcttggagattgtcactggtcaacccccagtatttatggatccccaaaccgtccacttgccaaattgggtgcggcaaaagattgataagggaagcatccacgatgttgtggacaagaaactgttagatcaatacgatgccactcacctgcaaactgtgatagaccttgcaatgaactgccttgaaaacacatcaattgacaggccaagcatgactgaggttgtttctgtgcttaaggtgttgtttacggtggctatttcaagtgagaaacgatcggttacatcaacccctcaagagaagaacgtcatggatgcagacattccacggcagttccacttgatgatttctggagctacaacaacaagctacgacaacgagggcagttcctcacagtctggtcctaccggtgggatgtcagaaataagctacatttctggacggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0810900, RefSeq:Os01g0810900